mRNA_F-serratus_M_contig71.18298.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig71.18298.1 vs. uniprot
Match: D7FYS3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS3_ECTSI) HSP 1 Score: 291 bits (746), Expect = 9.970e-98 Identity = 140/203 (68.97%), Postives = 166/203 (81.77%), Query Frame = 1
Query: 1 EEVDLKGRGALRLGCDWGVGIGGGIWTTGLLLVEHMSEHSALYDDLFRDTRVLELGSGTGLVGLAAARFGPPREVVITDLESHLEICRDNVA-QNKNGINESCPIRVEKYDWSGEVPPELGAVPFDVIIGTDVVYHEDLYAPFIQALDRTVGPESLVLLGVTRTDTGPAFFEALDEAGFEYNLIHQAVHKGFGLFTVCREKAD 606
+EV+L GR +WGVGIGGG+W+TG+LL EH+++H+ALYD +F+ RVLELGSGTGLVGLAAARFGPP EVVITDLESH++IC+ NVA Q+ G C +RVE YDWS EVP ELG VPFDVI+ TDV Y+E LYAPF+QAL+RT G +LVLLGVTRTDTGPAFF+ALD+AGF YNL+ QA HKGFGLFTV RE+ D
Sbjct: 16 KEVELDGRXXXXXEVNWGVGIGGGLWSTGILLTEHLAKHAALYDRVFKGKRVLELGSGTGLVGLAAARFGPPLEVVITDLESHVDICKRNVASQDDMGAQGLCSVRVEAYDWSSEVPEELGEVPFDVILATDVAYYEHLYAPFVQALERTAGQHTLVLLGVTRTDTGPAFFDALDKAGFVYNLVDQASHKGFGLFTVQREQPD 218
BLAST of mRNA_F-serratus_M_contig71.18298.1 vs. uniprot
Match: A0A7R9UE36_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UE36_9STRA) HSP 1 Score: 171 bits (432), Expect = 4.680e-50 Identity = 90/196 (45.92%), Postives = 118/196 (60.20%), Query Frame = 1
Query: 31 LRLGCDWGVGIGGGIWTTGLLLVEHMSEHSALYDDLFRDTRVLELGSGTGLVGLAAARFGPPREVVITDLESHLEICRDNVAQNKNGINES-CPIRVEKYDWSGEVPPELGAVPFDVIIGTDVVYHEDLYAPFIQALDRTVGPESLVLLGVTRTDTGPAFFEALDEAGFEYNLIHQA------VHKGFGLFTVCRE 597
L+L DW VGIGGG+W++ LV H Y RVLELG+GTGL G AA P E+V++D+ H+ + R NV QN + + +S +RVE +DW+ E L PFDV+IGTDV YHE LY A+DRT+ P+ +V+LGVTR+DTGP+FF L + GF Y+ I + FGLFTV RE
Sbjct: 23 LQLELDWSVGIGGGVWSSAEQLVAHFEAQQETYRQTLHGRRVLELGAGTGLAGFGAALVSPLSELVLSDVGEHVTLLRRNVEQNFDTLTQSGVKVRVETFDWTVEDVGHLDG-PFDVLIGTDVAYHESLYEDVANAIDRTLKPDGVVILGVTRSDTGPSFFRELVKRGFNYHRIRDEDMGGKHTNSSFGLFTVWRE 217
BLAST of mRNA_F-serratus_M_contig71.18298.1 vs. uniprot
Match: A0A835Z9W6_9STRA (Putative methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9W6_9STRA) HSP 1 Score: 167 bits (423), Expect = 1.040e-48 Identity = 86/198 (43.43%), Postives = 119/198 (60.10%), Query Frame = 1
Query: 31 LRLGCDWGVGIGGGIWTTGLLLVEHMSEHSALYDDLFRDTRVLELGSGTGLVGLAAARFGPPREVVITDLESHLEICRDNVAQNK-NGINESCPIRVEKYDWS-GEVPP-------ELGAVPFDVIIGTDVVYHEDLYAPFIQALDRTVGPESLVLLGVTRTDTGPAFFEALDEAGFE-YNLIHQAVHKGFGLFTVCR 594
L + CDWGVGIGG +W+ +L++ +M + L+ + RVLELG+GTG++ LA+A PR ++ITD SH++IC+ NV +N N N+S I + W G VP E GA FDV++G D+ Y LY P I AL VGP+++V LGVT+ DT P FF LDEAGF Y++ A F +FT+ R
Sbjct: 27 LSIKCDWGVGIGGHLWSCAMLMIRYMQQERELFSRILDGARVLELGAGTGMLSLASAALYDPRSIIITDQLSHIDICQHNVDRNSHNMFNKSLEIEARAFSWGDGNVPALISSDSAERGAASFDVVLGADLAYFSHLYQPLIAALVDVVGPKTVVFLGVTKADTDPTFFRLLDEAGFRFYDMSSGADTANFTIFTIFR 224
BLAST of mRNA_F-serratus_M_contig71.18298.1 vs. uniprot
Match: A0A1V9ZGF1_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZGF1_9STRA) HSP 1 Score: 162 bits (409), Expect = 9.420e-47 Identity = 93/212 (43.87%), Postives = 119/212 (56.13%), Query Frame = 1
Query: 1 EEVDLKGRGA--------LRLGCDWGVGIGGGIWTTGLLLVEHMSEHSALYDDLFRDTRVLELGSGTGLVGLAAARFGPPREVVITDLESHLEICRDNVAQNKNGINESCPIRVEKYDWSGEVPPELGAVPFDVIIGTDVVYHEDLYAPFIQALDRTVGPESLVLLGVTRTDTGPAFFEALDEAGFEY-----NLIHQAVH-KGFGLFTVCR 594
E + ++G GA + LGCDWGVGIGG +WT+G L+V++ S H L RVLELGSGTGLVGLA A GP V +TDL SH+ NVA+N + I I V DW+ PP P D I+GTD+ Y YAP + L R GP + +L+G+ R DT FF+ L +AGF Y +L+ Q H K FGLF + R
Sbjct: 4 ERIAVRGVGADGSDVDAIVELGCDWGVGIGGSLWTSGRLMVDYFSRHEPARRQL-AGARVLELGSGTGLVGLAVALMGPAH-VALTDLASHVAALEANVARNADRIPAETTITVSALDWNA--PPPTPDAPLDWIVGTDIAYSPAFYAPLLATLQRLAGPNTRILVGLGRHDTDRRFFQLLHDAGFSYYKVDESLMSQEFHGKDFGLFEIRR 211
BLAST of mRNA_F-serratus_M_contig71.18298.1 vs. uniprot
Match: W7U3Q4_9STRA (Nicotinamide N-methyltransferase, putative n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3Q4_9STRA) HSP 1 Score: 163 bits (413), Expect = 9.900e-47 Identity = 89/205 (43.41%), Postives = 122/205 (59.51%), Query Frame = 1
Query: 31 LRLGCDWGVGIGGGIWTTGLLLVEHMSEHSALYDDLFRDTRVLELGSGTGLVGLAAARFG--PPREVVITDLESHLEICRDNVAQNKNGINESCPIRVEKYDWSGEVPPE--------LGAVPFDVIIGTDVVYHEDLYAPFIQALDRTVGPESLVLLGVTRTDTGPAFFEALDEAGFEYNLIHQA-------VHKGFGLFTVCR 594
L L W VGIGGGIWTTGLLL E+ ++ + + R++E+GSGTGLV L+ A P+E+V+TD + HL++ N+ N + PIRV++++W + + L A+PFDV++GTDV Y ++LY P + AL R GP SL+LLGVTRTDT P FF+ L E GF+Y L A V GF L +V R
Sbjct: 56 LTLETQWNVGIGGGIWTTGLLLCEYFGRNATFFSKVLYGKRIIEIGSGTGLVALSLATNALFKPQEIVVTDQKDHLDLIERNICANIAKMK--APIRVQEFNWLKDKETKNTDSKVKALCALPFDVVVGTDVAYCQELYGPVVHALCRLSGPHSLILLGVTRTDTNPRFFQLLQEEGFDYCLTPVADGESSCTVAGGFALLSVVR 258
BLAST of mRNA_F-serratus_M_contig71.18298.1 vs. uniprot
Match: A0A7S1U640_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U640_9STRA) HSP 1 Score: 154 bits (390), Expect = 1.300e-43 Identity = 81/196 (41.33%), Postives = 116/196 (59.18%), Query Frame = 1
Query: 31 LRLGCDWGVGIGGGIWTTGLLLVEHMSEHSALYDDLFRDTRVLELGSGTGLVGLAAARF-GPPREVVITDLESHLEICRDNVAQNKNGINES-CPIRVEKYDWSGEVPPELGAVPFDVIIGTDVVYHEDLYAPFIQALDRTVGPESLVLLGVTRTDTGPAFFEALDEAGFEYNLIHQAVHKG------FGLFTVCR 594
++L +W VGIGGG+W+ + H+ H Y+ +R RV+ELG+GTGL G AAA G EVV+TD+ H+E+ R+N+ N + S +RVE++DW+ E FDV++GTDV YHEDLY A+D T + +V+LGVTR DTGP+FF A + GF Y+ + +++ G F LF R
Sbjct: 38 IQLTTNWDVGIGGGVWSAAEQFLGHVGAHRDFYEQKWRGRRVIELGAGTGLAGFAAALVAGAGAEVVLTDIGEHVEMLRENLKLNAQLMEASGASVRVEEFDWAKADEVEHLGGKFDVVVGTDVAYHEDLYDDVAAAIDATTKDDGVVVLGVTRLDTGPSFFRAFEARGFTYHRVDESLMGGAHTKSSFALFLAWR 233
BLAST of mRNA_F-serratus_M_contig71.18298.1 vs. uniprot
Match: A0A5D6YE76_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YE76_9STRA) HSP 1 Score: 151 bits (381), Expect = 5.080e-42 Identity = 89/204 (43.63%), Postives = 113/204 (55.39%), Query Frame = 1
Query: 31 LRLGCDWGVGIGGGIWTTGLLLVEHMSEHSALYDDLFRDTRVLELGSGTGLVGLAAARFGPPREVVITDLESHLEICRDNVAQNKNGINESCPIRVEKYDW-SGEVPPELGAV---------PFDVIIGTDVVYHEDLYAPFIQALDRTVGPESLVLLGVTRTDTGPAFFEALDEAGFEY-----NLIHQAVH-KGFGLFTVCR 594
LR CDW VGIGG +WT+G +L H+ +H+ Y LF VLELGSGTG VGL A P V++TDL +H+ NVA N + S +RV + W S E L A DVIIGTDV Y +LY P + +L R G ++LVLLG+ R DT AFF L++ GFEY +H+ H K FGLF + R
Sbjct: 31 LRFACDWDVGIGGSVWTSGQVLAGHLQQHADKYRPLFAGKCVLELGSGTGFVGLMTAVCFAPARVLLTDLATHVASLERNVALNAALLPPSTRVRVAELSWGSAEQEDALLASLGDGADTVDTVDVIIGTDVAYLHELYEPLLHSLRRLAGEQTLVLLGLNRADTDTAFFTRLEQDGFEYYKVPDEQLHRDYHGKDFGLFEIRR 234
BLAST of mRNA_F-serratus_M_contig71.18298.1 vs. uniprot
Match: A0A1V9ZYN4_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZYN4_9STRA) HSP 1 Score: 149 bits (375), Expect = 1.060e-41 Identity = 83/198 (41.92%), Postives = 115/198 (58.08%), Query Frame = 1
Query: 19 GRGALRLGCDWGVGIGGGIWTTGLLLVEHMSEHSALYDDLFRDTRVLELGSGTGLVGLAAARFGPPREVVITDLESHLEICRDNVAQNKNGINESCPIRVEKYDWSGEVPPELGAVPFDVIIGTDVVYHEDLYAPFIQALDRTVGPESLVLLGVTRTDTGPAFFEALDEAGFEYNLIHQAV------HKGFGLFTVCR 594
G ++ L C+W VGIGG +WT+G LLV+++S + + ++ TRVLELGSGTGLVGLA A FGP VV+TDLE+H+ +NV +N I + VE DW+ P +G F+ I+GTD+ Y Y P + L ++ + LG+ R DT FF+ L +AGFEY I +A K FGLF + R
Sbjct: 10 GDSSIELECNWDVGIGGSLWTSGRLLVDYLSRNGVVRQEI-EGTRVLELGSGTGLVGLAVALFGPA-SVVLTDLETHVAALENNVKRNAGRIPSRTNVTVEALDWNA--PKNVGDGVFEWIVGTDIAYSRSFYVPLLNTLTLFGTKKTKIQLGLGRDDTEMQFFKMLQDAGFEYYKISEAFVASEFHGKDFGLFEIRR 203
BLAST of mRNA_F-serratus_M_contig71.18298.1 vs. uniprot
Match: A0A2D4BZQ6_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZQ6_PYTIN) HSP 1 Score: 147 bits (372), Expect = 8.680e-41 Identity = 78/204 (38.24%), Postives = 111/204 (54.41%), Query Frame = 1
Query: 31 LRLGCDWGVGIGGGIWTTGLLLVEHMSEHSALYDDLFRDTRVLELGSGTGLVGLAAARFGPPREVVITDLESHLEICRDNVAQNKNGINESCPIRVEKYDWSGEVPPE-----LGAVP--FDVIIGTDVVYHEDLYAPFIQALDRTVGPESLVLLGVTRTDTGPAFFEALDEAGFEY------NLIHQAVHKGFGLFTVCREKA 603
L CDW VGIGG +WT+G +L H+ H Y ++F+ V+ELGSGTG VGL AA P +VV+TDL SHL+ + N+ N+ + +R + W + + LG D+++GTD+ Y + Y P + L R E+LVL+G+ R+DTG FF L++ GFEY L + K FGLF + R A
Sbjct: 34 LAFQCDWDVGIGGSVWTSGEILTAHLEMHQEQYREIFQGKSVVELGSGTGYVGLLAAACFQPAQVVLTDLASHLDCMQRNIDGNRTAVQPGVHVRAAELCWGCDAHEDALLASLGVTGRGVDIVLGTDIAYLTEFYEPILHTLRRITHSETLVLIGLNRSDTGMQFFRRLEQEGFEYYKLSDRQLPREHRGKDFGLFQIRRRGA 237
BLAST of mRNA_F-serratus_M_contig71.18298.1 vs. uniprot
Match: A0A067CH82_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CH82_SAPPC) HSP 1 Score: 145 bits (366), Expect = 2.920e-40 Identity = 80/194 (41.24%), Postives = 111/194 (57.22%), Query Frame = 1
Query: 31 LRLGCDWGVGIGGGIWTTGLLLVEHMSEHSALYDDLFRDTRVLELGSGTGLVGLAAARFGPPREVVITDLESHLEICRDNVAQNKNGINESCPIRVEKYDWSGEVPPELGAVPFDVIIGTDVVYHEDLYAPFIQALDRTVGPESLVLLGVTRTDTGPAFFEALDEAGFEYNLIHQAV------HKGFGLFTVCR 594
+ LGC+WGVGIGG +WT+G L+V++ S + L + VLELGSGTGLVGLA A GP VV+TDLESH+ + NV +N ++ + V DW+ + A P D I+GTD+ Y + YAP ++ L GP + +L+G+ R DT FF L +AGF Y + + K FGLF + R
Sbjct: 22 VELGCNWGVGIGGSLWTSGRLMVDYFSRNVRARQQL-QGASVLELGSGTGLVGLALACMGPA-SVVLTDLESHVAALQANVERNSARFSDGTLVSVAALDWNTASADDATA-PLDWIVGTDIAYMPEFYAPLLKTLQLLAGPNTRILVGLGRHDTDMRFFRLLQDAGFSYYKVSDELVSEEFRGKDFGLFEIQR 212 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig71.18298.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig71.18298.1 >prot_F-serratus_M_contig71.18298.1 ID=prot_F-serratus_M_contig71.18298.1|Name=mRNA_F-serratus_M_contig71.18298.1|organism=Fucus serratus male|type=polypeptide|length=203bp EEVDLKGRGALRLGCDWGVGIGGGIWTTGLLLVEHMSEHSALYDDLFRDTback to top mRNA from alignment at F-serratus_M_contig71:647886..653916- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig71.18298.1 ID=mRNA_F-serratus_M_contig71.18298.1|Name=mRNA_F-serratus_M_contig71.18298.1|organism=Fucus serratus male|type=mRNA|length=6031bp|location=Sequence derived from alignment at F-serratus_M_contig71:647886..653916- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig71:647886..653916- >mRNA_F-serratus_M_contig71.18298.1 ID=mRNA_F-serratus_M_contig71.18298.1|Name=mRNA_F-serratus_M_contig71.18298.1|organism=Fucus serratus male|type=CDS|length=1218bp|location=Sequence derived from alignment at F-serratus_M_contig71:647886..653916- (Fucus serratus male)back to top |