prot_F-serratus_M_contig71.18292.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig71.18292.1
Unique Nameprot_F-serratus_M_contig71.18292.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length128
Homology
BLAST of mRNA_F-serratus_M_contig71.18292.1 vs. uniprot
Match: D7FYT5_ECTSI (40S ribosomal protein S17 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYT5_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 6.850e-36
Identity = 64/70 (91.43%), Postives = 66/70 (94.29%), Query Frame = 0
Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVCLLSKRS 70
            MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEV  + + S
Sbjct:   25 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQES 94          
BLAST of mRNA_F-serratus_M_contig71.18292.1 vs. uniprot
Match: A0A7S4SMK2_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4SMK2_9DINO)

HSP 1 Score: 126 bits (317), Expect = 4.570e-35
Identity = 62/68 (91.18%), Postives = 65/68 (95.59%), Query Frame = 0
Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVCLLSK 68
            +DFHTNKRVCDEVAIIPSKRMRNKIAGF+THLMKRIQRGPVRGISLKLQEEERERRMDFVPEV  L +
Sbjct:   35 LDFHTNKRVCDEVAIIPSKRMRNKIAGFITHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSALDQ 102          
BLAST of mRNA_F-serratus_M_contig71.18292.1 vs. uniprot
Match: F0Y4Q4_AURAN (Uncharacterized protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0Y4Q4_AURAN)

HSP 1 Score: 125 bits (313), Expect = 1.460e-34
Identity = 60/68 (88.24%), Postives = 65/68 (95.59%), Query Frame = 0
Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVCLLSK 68
            +DFHTNKRVCDEVA++PSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEV  + +
Sbjct:   25 VDFHTNKRVCDEVAVVPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIDQ 92          
BLAST of mRNA_F-serratus_M_contig71.18292.1 vs. uniprot
Match: A0A836CIS9_9STRA (40S ribosomal protein S17 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIS9_9STRA)

HSP 1 Score: 125 bits (313), Expect = 1.550e-34
Identity = 61/68 (89.71%), Postives = 65/68 (95.59%), Query Frame = 0
Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVCLLSK 68
            +DFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERR+DFVPEV  + +
Sbjct:   25 LDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVSAIEQ 92          
BLAST of mRNA_F-serratus_M_contig71.18292.1 vs. uniprot
Match: A0A7S2SHA1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SHA1_9STRA)

HSP 1 Score: 123 bits (309), Expect = 7.270e-34
Identity = 63/79 (79.75%), Postives = 67/79 (84.81%), Query Frame = 0
Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVCLLSKRSPSTLTLTRR 79
            +DFHTNKRV DEVAIIPSKRMRNKIAGF THLMKRIQRGPVRGISLKLQEEERERR+DFVPEV  L      T+ LT +
Sbjct:   33 LDFHTNKRVVDEVAIIPSKRMRNKIAGFTTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVSALDVEETLTVDLTTK 111          
BLAST of mRNA_F-serratus_M_contig71.18292.1 vs. uniprot
Match: A0A4D9CUE3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUE3_9STRA)

HSP 1 Score: 122 bits (306), Expect = 1.410e-33
Identity = 60/71 (84.51%), Postives = 65/71 (91.55%), Query Frame = 0
Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVCLLSKRSP 71
            MDFHTNKRV DEVA +PSKRMRNKIAGFVTHLMKRIQ+GPVRGISLKLQEEERERR+DFVPEV L+ +  P
Sbjct:   25 MDFHTNKRVVDEVAEVPSKRMRNKIAGFVTHLMKRIQKGPVRGISLKLQEEERERRLDFVPEVSLIEQEQP 95          
BLAST of mRNA_F-serratus_M_contig71.18292.1 vs. uniprot
Match: A0A7J7IQE7_9RHOD (40S ribosomal protein S17 n=2 Tax=Cyanidiaceae TaxID=265316 RepID=A0A7J7IQE7_9RHOD)

HSP 1 Score: 122 bits (306), Expect = 2.340e-33
Identity = 58/62 (93.55%), Postives = 62/62 (100.00%), Query Frame = 0
Query:    2 DFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEV 63
            DFHTNKRVCDEVAI+PSKRMRNK+AGF+THLMKRIQRGPVRGISLKLQEEERERRMDFVP+V
Sbjct:   28 DFHTNKRVCDEVAILPSKRMRNKVAGFITHLMKRIQRGPVRGISLKLQEEERERRMDFVPDV 89          
BLAST of mRNA_F-serratus_M_contig71.18292.1 vs. uniprot
Match: W7TDH0_9STRA (40s ribosomal protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TDH0_9STRA)

HSP 1 Score: 122 bits (306), Expect = 6.250e-33
Identity = 60/71 (84.51%), Postives = 65/71 (91.55%), Query Frame = 0
Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVCLLSKRSP 71
            MDFHTNKRV DEVA +PSKRMRNKIAGFVTHLMKRIQ+GPVRGISLKLQEEERERR+DFVPEV L+ +  P
Sbjct:   25 MDFHTNKRVVDEVAEVPSKRMRNKIAGFVTHLMKRIQKGPVRGISLKLQEEERERRLDFVPEVSLIEQEQP 95          
BLAST of mRNA_F-serratus_M_contig71.18292.1 vs. uniprot
Match: M2XPP6_GALSU (40S ribosomal protein S17 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XPP6_GALSU)

HSP 1 Score: 119 bits (297), Expect = 5.420e-32
Identity = 56/63 (88.89%), Postives = 62/63 (98.41%), Query Frame = 0
Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEV 63
            +DF TNKR+CDEVA+IPSKR+RNKIAGFVTHLMKRIQ+GPVRGISLKLQEEERERRMDFVPE+
Sbjct:   26 LDFQTNKRICDEVALIPSKRLRNKIAGFVTHLMKRIQKGPVRGISLKLQEEERERRMDFVPEI 88          
BLAST of mRNA_F-serratus_M_contig71.18292.1 vs. uniprot
Match: A0A067CK86_SAPPC (40S ribosomal protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CK86_SAPPC)

HSP 1 Score: 118 bits (296), Expect = 5.730e-32
Identity = 57/67 (85.07%), Postives = 64/67 (95.52%), Query Frame = 0
Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVCLLS 67
            +DF +NKRVCDEVAIIPSKRMRNKIAG++THLMKRIQRGPVRGISLKLQEEERERR+DFVPEV  ++
Sbjct:   25 LDFDSNKRVCDEVAIIPSKRMRNKIAGYITHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVSAIN 91          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig71.18292.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYT5_ECTSI6.850e-3691.4340S ribosomal protein S17 n=2 Tax=Ectocarpus TaxID... [more]
A0A7S4SMK2_9DINO4.570e-3591.18Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
F0Y4Q4_AURAN1.460e-3488.24Uncharacterized protein n=2 Tax=Pelagomonadales Ta... [more]
A0A836CIS9_9STRA1.550e-3489.7140S ribosomal protein S17 n=2 Tax=Tribonema minus ... [more]
A0A7S2SHA1_9STRA7.270e-3479.75Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9CUE3_9STRA1.410e-3384.51Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7J7IQE7_9RHOD2.340e-3393.5540S ribosomal protein S17 n=2 Tax=Cyanidiaceae Tax... [more]
W7TDH0_9STRA6.250e-3384.5140s ribosomal protein n=1 Tax=Nannochloropsis gadi... [more]
M2XPP6_GALSU5.420e-3288.8940S ribosomal protein S17 n=1 Tax=Galdieria sulphu... [more]
A0A067CK86_SAPPC5.730e-3285.0740S ribosomal protein n=4 Tax=Saprolegniaceae TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001210Ribosomal protein S17ePFAMPF00833Ribosomal_S17ecoord: 2..69
e-value: 5.8E-37
score: 126.3
IPR001210Ribosomal protein S17ePANTHERPTHR1073240S RIBOSOMAL PROTEIN S17coord: 2..68
IPR036401Ribosomal protein S17e-like superfamilyGENE3D1.10.60.20coord: 1..37
e-value: 4.0E-20
score: 73.2
IPR036401Ribosomal protein S17e-like superfamilySUPERFAMILY116820Rps17e-likecoord: 2..37
IPR018273Ribosomal protein S17e, conserved sitePROSITEPS00712RIBOSOMAL_S17Ecoord: 16..31
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 97..121
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 122..127
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig71contigF-serratus_M_contig71:487898..494423 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig71.18292.1mRNA_F-serratus_M_contig71.18292.1Fucus serratus malemRNAF-serratus_M_contig71 487664..495054 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig71.18292.1 ID=prot_F-serratus_M_contig71.18292.1|Name=mRNA_F-serratus_M_contig71.18292.1|organism=Fucus serratus male|type=polypeptide|length=128bp
MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQE
EERERRMDFVPEVCLLSKRSPSTLTLTRRTCLMRLTSRICQESLCRLLLP
ACDLITGIASGRLAILCLWVVRRVVAG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001210Ribosomal_S17e
IPR036401RPS17e-like_sf
IPR018273Ribosomal_S17e_CS