mRNA_F-serratus_M_contig71.18289.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig71.18289.1
Unique NamemRNA_F-serratus_M_contig71.18289.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig71.18289.1 vs. uniprot
Match: A0A6H5LB61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB61_9PHAE)

HSP 1 Score: 387 bits (995), Expect = 2.370e-130
Identity = 204/280 (72.86%), Postives = 235/280 (83.93%), Query Frame = 3
Query:  273 ATMKVESAPDHDIYGAALTTTALAVSGAAAFGVGINHFLGTEKALQYVAGYVVEMSLSVDNLFVFLLLFKFFKVPFDSQSRVLSYGILGAVIMRAIFIALGETAMAMFHPVLLGFAAILLFSSYKLLSEGENDEVNDLSENWIVSLASETLDATDSYDGDNFFTSVKGVRRATPLLLVLACIELSDVVFAIDSIPAVFAITKDPFIVYTSNIWAIINLRSLYTLLSRAVDDLKYLRPAVAIVLGFVGTKIAGEFLGYDIPTEVSLGIIVGLLGIGVAASL 1112
            +T  VE A D D Y AA+ TTA A  GA AFG G+N  LG +KALQ+ AGYVVEMSLSVDNLFVFLLLFKFFKVPFD+Q+RVL+YGI+GAV+MRAIFI LGE  M++FHP+LLGFA ILL+SSY LLSE E D   DLS+N +++ AS TLDAT+SYDGD FFT V GVRRATPLLLVL C+ELSD+VFA+DSIPAVFA+TKDPFIVYTSNIWAI+NLRSL+TLL+ AV+DL YLRPAVA VLGFVG KI GEF GY++ TE+SL II G+L  GVAASL
Sbjct:   65 STTMVERA-DPDRYVAAIATTAAATIGAIAFGAGVNEALGIDKALQFFAGYVVEMSLSVDNLFVFLLLFKFFKVPFDAQNRVLTYGIIGAVVMRAIFIGLGEATMSVFHPILLGFAGILLYSSYTLLSESEGDGDEDLSDNKLIAFASSTLDATESYDGDKFFTMVDGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAAVLGFVGCKIGGEFFGYNVSTELSLEIITGVLAAGVAASL 343          
BLAST of mRNA_F-serratus_M_contig71.18289.1 vs. uniprot
Match: A0A835YKR2_9STRA (Integral membrane protein TerC family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKR2_9STRA)

HSP 1 Score: 328 bits (842), Expect = 4.500e-107
Identity = 175/286 (61.19%), Postives = 219/286 (76.57%), Query Frame = 3
Query:  279 MKVESAPDHDIYGAALTTTALAVSGAAAFGVGINHFLGTEKALQYVAGYVVEMSLSVDNLFVFLLLFKFFKVPFDSQSRVLSYGILGAVIMRAIFIALGETAMAMFHPVLLGFAAILLFSSYKLLSEGENDEVNDLSENWIVSLASETLDATDSYDGDNFFTSVKGVRRATPLLLVLACIELSDVVFAIDSIPAVFAITKDPFIVYTSNIWAIINLRSLYTLLSRAVDDLKYLRPAVAIVLGFVGTKIAGEFLGYDIPTEVSLGIIVGLLGIGVAASLAERNADSK 1136
            M  +  PD D Y  A+  + ++++ AAAFG GI+   G+E A+ Y AGYVVE SLSVDNLFVFLLLF++F VP   Q RVL +GI+GAVI+R +FIALGE A+  F PVLLGFAAIL+ S+YKL +E E  E  DL++N +V  +S+ L ATD YDGD FFT V GVRRATPLLLVL C+ELSD+VFA+DSIPAVF  T+DPF+VYTSNI+AI+NLRSLYT+LS AV DL+YLRPAVA VL FVG K+A E+ GY++ T +SLG+I  LLG GVA SL + + + +
Sbjct:   72 MPRDETPDPDRYKVAVRNSLISIAAAAAFGAGISVVQGSEAAVGYFAGYVVEQSLSVDNLFVFLLLFEYFNVPISYQQRVLRWGIVGAVILRGVFIALGEAALESFQPVLLGFAAILMVSAYKLFTEEEGGEA-DLTDNQVVQFSSKILKATDQYDGDKFFTMVDGVRRATPLLLVLVCVELSDLVFAVDSIPAVFGCTRDPFLVYTSNIFAIVNLRSLYTVLSNAVGDLEYLRPAVAGVLAFVGAKLAAEYFGYEVDTLLSLGVISTLLGGGVALSLLKGDEEGE 356          
BLAST of mRNA_F-serratus_M_contig71.18289.1 vs. uniprot
Match: A0A835YPV1_9STRA (Integral membrane protein TerC family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPV1_9STRA)

HSP 1 Score: 318 bits (815), Expect = 6.460e-104
Identity = 171/279 (61.29%), Postives = 207/279 (74.19%), Query Frame = 3
Query:  285 VESAPDHDIYGAALTTTALAVSGAAAFGVGINHFLGTEKALQYVAGYVVEMSLSVDNLFVFLLLFKFFKVPFDSQSRVLSYGILGAVIMRAIFIALGETAMAMFHPVLLGFAAILLFSSYKLLSEGENDEVNDLSENWIVSLASETLDATDSYDGDNFFTSVKGVRRATPLLLVLACIELSDVVFAIDSIPAVFAITKDPFIVYTSNIWAIINLRSLYTLLSRAVDDLKYLRPAVAIVLGFVGTKIAGEFLGYDIPTEVSLGIIVGLLGIGVAASLAER 1121
            +E  PD + Y  AL  T L+++GAA FG GI +  GTE AL+Y AGY+VE SLSVDNLFVFLLLF++F VP   Q RVL +GI+GAVI+R IF+ALG+ A+  F PVLL FA ILL SSYKLL+EG + E   L  N IV ++   L AT+ YDGD FFT V G+RRATPLLLVL C+E SD+VFA+DSIPAVF +TKDP IVY+SNI+AI+NLRSLYT+LS AV DL YLRPAVA+VL FVG K+  E+    + T +SLGII  +L  GV  SL ER
Sbjct:    5 LEEPPDPNRYATALRNTLLSIAGAALFGAGITYVKGTELALEYFAGYIVEQSLSVDNLFVFLLLFEYFSVPVAYQGRVLQWGIIGAVILRGIFVALGQAALESFQPVLLIFAGILLVSSYKLLTEGGDGEEESLHNNKIVQVSKRLLRATEEYDGDRFFTMVDGMRRATPLLLVLVCVEASDLVFAVDSIPAVFGVTKDPLIVYSSNIFAILNLRSLYTVLSTAVGDLVYLRPAVALVLAFVGLKLGAEYFSVTVDTVLSLGIISTILAGGVGLSLYER 283          
BLAST of mRNA_F-serratus_M_contig71.18289.1 vs. uniprot
Match: A0A7S0HY79_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HY79_9CRYP)

HSP 1 Score: 305 bits (781), Expect = 9.250e-98
Identity = 162/276 (58.70%), Postives = 209/276 (75.72%), Query Frame = 3
Query:  312 YGAALTTTALAVSGAAAFGVGINHFLGTEKALQYVAGYVVEMSLSVDNLFVFLLLFKFFKVPFDSQSRVLSYGILGAVIMRAIFIALGETAMAMFHPVLLGFAAILLFSSYKLLSEGENDEVN-DLSENWIVSLASETLDATDSYDGDNFFTSVKGVRRATPLLLVLACIELSDVVFAIDSIPAVFAITKDPFIVYTSNIWAIINLRSLYTLLSRAVDDLKYLRPAVAIVLGFVGTKIAGEFLGYDIPTEVSLGIIVGLLGIGVAASLAERNADSK 1136
            Y  AL  TA+AVS A+AFGVGI +FLG +KAL+Y  GY++E SLSVDNLFVFLLLF++FKVP   Q +VLSYGI GAV+MRA FI+ G  A+  F  VLL FA +L++SS+K+LS GE +E N D+SEN IV  AS+ + AT  YDGD FFT V GV++ATPL LVL C+E SDV+FA+DSIPAVF +T+DP IV TSNI+AI++LR+LY +L++   DLKYL  AV  VLGFVG K+ GE+ G+++P + SL +++GLL  GV AS+ E+    K
Sbjct:   47 YKTALRDTAIAVSLASAFGVGIWNFLGADKALEYFTGYLLEESLSVDNLFVFLLLFEYFKVPQYQQKKVLSYGIWGAVVMRAAFISAGLVAIQQFRGVLLVFAGLLMYSSFKMLSGGEEEEENADVSENSIVKFASKLVQATPEYDGDKFFTIVDGVKKATPLFLVLLCVEFSDVMFAVDSIPAVFGVTEDPLIVLTSNIFAIMSLRALYQVLAQLAKDLKYLETAVGAVLGFVGLKLVGEYFGFELPEQASLSVVIGLLTAGVGASIYEKRQTFK 322          
BLAST of mRNA_F-serratus_M_contig71.18289.1 vs. uniprot
Match: A4S7T9_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S7T9_OSTLU)

HSP 1 Score: 299 bits (766), Expect = 9.910e-97
Identity = 159/287 (55.40%), Postives = 212/287 (73.87%), Query Frame = 3
Query:  279 MKVESAPDHDIYGAALTTTALAVSGAAAFGVGINHFLGTEKALQYVAGYVVEMSLSVDNLFVFLLLFKFFKVPFDSQSRVLSYGILGAVIMRAIFIALGETAMAMFHPVLLGFAAILLFSSYKLLSEGENDEVNDLSENWIVSLASETLDATDSYDGDNFFTSVKGVRRATPLLLVLACIELSDVVFAIDSIPAVFAITKDPFIVYTSNIWAIINLRSLYTLLSRAVDDLKYLRPAVAIVLGFVGTKIAGEFLGYDIPTEVSLGIIVGLLGIGVAASLAERNADSKG 1139
            M  E+  + D+   A+    L VS   AFG GI    G +KA +Y AGY++E SLSVDNLFVF+LLF++FKVP + Q+RVL+YGI+GA++MRA+ +  G   +  F P+LL FA IL+FSSYKLL+EGE +E  D+ +N IV      L+ ++ YDGDNFFT   GV+ ATPLLLVLA +E+SDVVFA+DSIPAVF +TKDPFIVYTSN++AI++LR LYTL+S+AV +LKYL+ AVA+VLGF+G K+  E+ G ++PTE SL ++V +LG GV ASL   + D +G
Sbjct:    1 MTSEAKQNRDV---AIVAACLGVS--CAFGAGIGAVEGADKASEYFAGYLLEQSLSVDNLFVFVLLFEYFKVPPERQTRVLNYGIVGALVMRAVMVGAGVELIENFQPILLVFAGILIFSSYKLLAEGEEEE-EDMGDNAIVKFVGNFLEVSEDYDGDNFFTVQNGVKMATPLLLVLAVVEISDVVFAVDSIPAVFGVTKDPFIVYTSNLFAILSLRQLYTLISKAVGELKYLQTAVALVLGFIGAKMIVEYAGVEVPTEASLAVVVTMLGGGVGASLMLPSEDKEG 281          
BLAST of mRNA_F-serratus_M_contig71.18289.1 vs. uniprot
Match: A0A7S2V8N4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8N4_9STRA)

HSP 1 Score: 301 bits (771), Expect = 3.370e-96
Identity = 157/271 (57.93%), Postives = 206/271 (76.01%), Query Frame = 3
Query:  321 ALTTTALAVSGAAAFGVGINHFLGTEKALQYVAGYVVEMSLSVDNLFVFLLLFKFFKVPFDSQSRVLSYGILGAVIMRAIFIALGETAMAMFHPVLLGFAAILLFSSYKLLSE---GENDEVNDLSENWIVSLASETLDATDSYDGDNFFTSVKGVRRATPLLLVLACIELSDVVFAIDSIPAVFAITKDPFIVYTSNIWAIINLRSLYTLLSRAVDDLKYLRPAVAIVLGFVGTKIAGEFLGYDIPTEVSLGIIVGLLGIGVAASLAERN 1124
            AL  T+LAV  AA FG GI  F G E  L++ AGY+VE SLSVDNLFVFLLLFK+F+VP   +++VL++GI GA+++R I I +G  A+ +F P+ L FAA+L +SSYK+L+E   GE +E  DL +N I+ LAS+ L  +D YDG  FFT V GV+ ATPLLL L C+ELSD+VFA+DS+PAVF +TKDPFIVYTSNI+AI+ LRSLYT+LS+AV +L YL+PAV IVLGF+G+K+  E+ GY+I T VSLG++  LLG GV  S+  ++
Sbjct:  101 ALKQTSLAVVSAAMFGAGIFWFKGVESGLEFAAGYLVEQSLSVDNLFVFLLLFKYFQVPKCYENQVLNWGIFGALLLRGIMIGIGVEAVELFQPIFLVFAAVLAYSSYKILAEWVTGEGEEEEDLEDNAIIKLASKVLTVSDEYDGGKFFTVVDGVKVATPLLLCLVCVELSDIVFAVDSVPAVFGVTKDPFIVYTSNIFAILGLRSLYTVLSKAVSELDYLQPAVGIVLGFIGSKLGLEYYGYEISTGVSLGVVAALLGGGVGLSVLTKS 371          
BLAST of mRNA_F-serratus_M_contig71.18289.1 vs. uniprot
Match: A0A096PAW2_OSTTA (Integral membrane protein TerC,riboswitch-linked n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096PAW2_OSTTA)

HSP 1 Score: 292 bits (748), Expect = 4.840e-94
Identity = 150/251 (59.76%), Postives = 196/251 (78.09%), Query Frame = 3
Query:  360 AFGVGINHFLGTEKALQYVAGYVVEMSLSVDNLFVFLLLFKFFKVPFDSQSRVLSYGILGAVIMRAIFIALGETAMAMFHPVLLGFAAILLFSSYKLLSEGENDEVNDLSENWIVSLASETLDATDSYDGDNFFTSVKGVRRATPLLLVLACIELSDVVFAIDSIPAVFAITKDPFIVYTSNIWAIINLRSLYTLLSRAVDDLKYLRPAVAIVLGFVGTKIAGEFLGYDIPTEVSLGIIVGLLGIGVAASL 1112
            AFG  I    G++ A +Y AGY++E SLSVDNLFVF+LLF++F+VP   Q  VL+YGI GA+IMRA+ I  G   +  F P+LL FA IL+FSSYKL+S+G++DE  D+++N +V   S+  D +D YDGDNFFT   GV+ ATPLLLVLA +E+SDVVFA+DSIPAVF +TKDPFIVYTSN++AI++LR LYTL+S AV +LKYL+ AVA+VLGF+G+K+  E+ G +IPTE+SL ++V LL  GVAASL
Sbjct:   21 AFGAAIGATSGSDAASEYFAGYLLEQSLSVDNLFVFVLLFEYFQVPPARQKVVLNYGIFGALIMRAVMIVAGVELIENFKPILLVFAGILIFSSYKLISQGDSDEEEDMADNAVVKFCSKLFDVSDDYDGDNFFTVQNGVKMATPLLLVLAVVEISDVVFAVDSIPAVFGVTKDPFIVYTSNLFAILSLRQLYTLISTAVGELKYLQTAVALVLGFIGSKMVVEYTGVEIPTELSLAVVVTLLSGGVAASL 271          
BLAST of mRNA_F-serratus_M_contig71.18289.1 vs. uniprot
Match: C1EER2_MICCC (Uncharacterized protein (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EER2_MICCC)

HSP 1 Score: 291 bits (744), Expect = 1.070e-93
Identity = 152/259 (58.69%), Postives = 195/259 (75.29%), Query Frame = 3
Query:  345 VSGAAAFGVGINHFLGTEKALQYVAGYVVEMSLSVDNLFVFLLLFKFFKVPFDSQSRVLSYGILGAVIMRAIFIALGETAMAMFHPVLLGFAAILLFSSYKLLSEGENDEVNDLSENWIVSLASETLDATDSYDGDNFFTSVKGVRRATPLLLVLACIELSDVVFAIDSIPAVFAITKDPFIVYTSNIWAIINLRSLYTLLSRAVDDLKYLRPAVAIVLGFVGTKIAGEFLGYDIPTEVSLGIIVGLLGIGVAASLAER 1121
            V  A AFG+G+   +G EKA ++ AGY++E SLSVDNLFVF+L+F +FKVP  SQ RVL+YGI GA++MRA  I  G  A+  F P+LL FA +L+FSSYKL++EGE +E  D+SEN IV   S  L  +  YDG+NFFT+  G + ATPLLL L  IELSDVVFA+DSIPAVF IT+DPFIVY+SNI+AI+ LRSL+  ++  V +L+YL+ AVA VLGFVG K+  EF G +IPTE SL ++VG+LG GVA SLA++
Sbjct:    5 VGAAVAFGLGVGAVMGAEKAEEFFAGYLLEQSLSVDNLFVFVLVFDYFKVPLASQPRVLNYGIWGAMVMRAAMIIAGYEAVTNFKPILLVFAGVLIFSSYKLIAEGEEEEEEDMSENAIVKFCSNLLPVSKDYDGENFFTTENGAKIATPLLLCLCVIELSDVVFAVDSIPAVFGITEDPFIVYSSNIFAIMGLRSLFAFVATMVAELEYLQTAVAAVLGFVGCKMVVEFGGVEIPTEASLAVVVGMLGAGVALSLAKK 263          
BLAST of mRNA_F-serratus_M_contig71.18289.1 vs. uniprot
Match: A0A7S0MZU7_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MZU7_9CRYP)

HSP 1 Score: 294 bits (752), Expect = 1.130e-92
Identity = 153/275 (55.64%), Postives = 202/275 (73.45%), Query Frame = 3
Query:  312 YGAALTTTALAVSGAAAFGVGINHFLGTEKALQYVAGYVVEMSLSVDNLFVFLLLFKFFKVPFDSQSRVLSYGILGAVIMRAIFIALGETAMAMFHPVLLGFAAILLFSSYKLLSEGENDEVNDLSENWIVSLASETLDATDSYDGDNFFTSVKGVRRATPLLLVLACIELSDVVFAIDSIPAVFAITKDPFIVYTSNIWAIINLRSLYTLLSRAVDDLKYLRPAVAIVLGFVGTKIAGEFLGYDIPTEVSLGIIVGLLGIGVAASLAERNADSK 1136
            Y +A+  T LAVS A AFG+G+   LG  KA+++ +GYVVE SLSVDNLFVF+LLF++FKV    Q RVL +GI+GA ++R  FIA G  A+  F  VLL FA  L+FSS+K+L+ GE +E  DLS+N +V LAS  + +T  YDGD FFT V GVRRATPLLLVL C+ELSDV+FA+DSIPAVF IT+DPFIV TSN++AI+ LR+L+ ++S+ + +L+YL PAV +VLGFVG K+ G F G ++P   SL +I+ LLG GV  S   R+ + +
Sbjct:  103 YQSAIRNTGLAVSAAVAFGIGVGAVLGVPKAIEFFSGYVVEESLSVDNLFVFILLFEYFKVSQALQQRVLKWGIIGAAVLRGAFIAAGLVAIESFKGVLLVFAGFLIFSSFKILTGGEEEEEEDLSQNSVVKLASRLVQSTTEYDGDKFFTVVDGVRRATPLLLVLVCVELSDVMFAVDSIPAVFGITEDPFIVLTSNLFAILGLRALFQIISKVMKNLEYLEPAVGLVLGFVGLKMVGGFFGVEVPPAESLAVILSLLGGGVGLSYLNRHDEEE 377          
BLAST of mRNA_F-serratus_M_contig71.18289.1 vs. uniprot
Match: A0A1Y1IHD0_KLENI (Integral membrane protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IHD0_KLENI)

HSP 1 Score: 294 bits (752), Expect = 1.990e-92
Identity = 154/264 (58.33%), Postives = 202/264 (76.52%), Query Frame = 3
Query:  321 ALTTTALAVSGAAAFGVGINHFLGTEKALQYVAGYVVEMSLSVDNLFVFLLLFKFFKVPFDSQSRVLSYGILGAVIMRAIFIALGETAMAMFHPVLLGFAAILLFSSYKLLSEGENDEVNDLSENWIVSLASETLDATDSYDGDNFFTSVKGVRRATPLLLVLACIELSDVVFAIDSIPAVFAITKDPFIVYTSNIWAIINLRSLYTLLSRAVDDLKYLRPAVAIVLGFVGTKIAGEFLGYDIPTEVSLGIIVGLLGIGVAASL 1112
            AL T A  V+ AA FG G+    G  KA +Y AGY++E SLSVDNLFVF+L+FK+F+VP D Q+RVLS+GI GAV+ RA+ I LG   +  F  V L FA ILLFSS+KLL +G++DE  DLS+N+IV   S+ +++TD YDG+NFFT V GV+RATPLLL LA +ELSD+ FA+DSIPAVF +T DPFIV++SNI+AII LRSLYTL++  + DL++L+P++AIVLGFVG K+  EF G  +PTE SL +++G+LG G+  SL
Sbjct:  173 ALITVAFWVAAAAVFGAGVGIVQGPGKASEYFAGYILEQSLSVDNLFVFVLIFKYFQVPLDYQNRVLSWGIAGAVVFRALLIGLGAATVQEFTAVNLVFAGILLFSSFKLL-QGDDDEDEDLSDNYIVKTCSKLINSTDYYDGNNFFTVVDGVKRATPLLLTLAVVELSDIAFAVDSIPAVFGVTHDPFIVFSSNIFAIICLRSLYTLVAGVMKDLRFLQPSIAIVLGFVGAKLIAEFAGLQVPTESSLAVVIGVLGSGIFLSL 435          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig71.18289.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LB61_9PHAE2.370e-13072.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YKR2_9STRA4.500e-10761.19Integral membrane protein TerC family-domain-conta... [more]
A0A835YPV1_9STRA6.460e-10461.29Integral membrane protein TerC family-domain-conta... [more]
A0A7S0HY79_9CRYP9.250e-9858.70Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A4S7T9_OSTLU9.910e-9755.40Uncharacterized protein n=1 Tax=Ostreococcus lucim... [more]
A0A7S2V8N4_9STRA3.370e-9657.93Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A096PAW2_OSTTA4.840e-9459.76Integral membrane protein TerC,riboswitch-linked n... [more]
C1EER2_MICCC1.070e-9358.69Uncharacterized protein (Fragment) n=1 Tax=Micromo... [more]
A0A7S0MZU7_9CRYP1.130e-9255.64Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A1Y1IHD0_KLENI1.990e-9258.33Integral membrane protein n=1 Tax=Klebsormidium ni... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig71contigF-serratus_M_contig71:338310..341475 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score300.1
Seed ortholog evalue1.5e-78
Seed eggNOG ortholog242159.ABO99804
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006996,GO:0007275,GO:0008150,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009657,GO:0009668,GO:0009791,GO:0009987,GO:0010027,GO:0016020,GO:0016043,GO:0031976,GO:0031984,GO:0032501,GO:0032502,GO:0034357,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0048856,GO:0055035,GO:0061024,GO:0071840,GO:0090351
EggNOG free text desc.Integral membrane protein TerC family
EggNOG OGs2QQNF@2759,34H2E@3041,37K44@33090,COG0861@1
Ec32 ortholog descriptionIntegral membrane protein TerC, riboswitch-linked
Ec32 orthologEc-19_002470.1
COG Functional cat.P
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
Exons4
Model size1211
Cds size1143
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig71.18289.1prot_F-serratus_M_contig71.18289.1Fucus serratus malepolypeptideF-serratus_M_contig71 338373..341470 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932177.9074583-UTR-F-serratus_M_contig71:338309..3383721622932177.9074583-UTR-F-serratus_M_contig71:338309..338372Fucus serratus maleUTRF-serratus_M_contig71 338310..338372 -
1690964185.2076547-UTR-F-serratus_M_contig71:338309..3383721690964185.2076547-UTR-F-serratus_M_contig71:338309..338372Fucus serratus maleUTRF-serratus_M_contig71 338310..338372 -
1622932178.0102468-UTR-F-serratus_M_contig71:341470..3414751622932178.0102468-UTR-F-serratus_M_contig71:341470..341475Fucus serratus maleUTRF-serratus_M_contig71 341471..341475 -
1690964185.2774792-UTR-F-serratus_M_contig71:341470..3414751690964185.2774792-UTR-F-serratus_M_contig71:341470..341475Fucus serratus maleUTRF-serratus_M_contig71 341471..341475 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932177.9308732-CDS-F-serratus_M_contig71:338372..3386421622932177.9308732-CDS-F-serratus_M_contig71:338372..338642Fucus serratus maleCDSF-serratus_M_contig71 338373..338642 -
1690964185.2241697-CDS-F-serratus_M_contig71:338372..3386421690964185.2241697-CDS-F-serratus_M_contig71:338372..338642Fucus serratus maleCDSF-serratus_M_contig71 338373..338642 -
1622932177.9586477-CDS-F-serratus_M_contig71:339234..3393451622932177.9586477-CDS-F-serratus_M_contig71:339234..339345Fucus serratus maleCDSF-serratus_M_contig71 339235..339345 -
1690964185.2385833-CDS-F-serratus_M_contig71:339234..3393451690964185.2385833-CDS-F-serratus_M_contig71:339234..339345Fucus serratus maleCDSF-serratus_M_contig71 339235..339345 -
1622932177.9783728-CDS-F-serratus_M_contig71:340557..3408331622932177.9783728-CDS-F-serratus_M_contig71:340557..340833Fucus serratus maleCDSF-serratus_M_contig71 340558..340833 -
1690964185.247848-CDS-F-serratus_M_contig71:340557..3408331690964185.247848-CDS-F-serratus_M_contig71:340557..340833Fucus serratus maleCDSF-serratus_M_contig71 340558..340833 -
1622932177.9981933-CDS-F-serratus_M_contig71:340984..3414701622932177.9981933-CDS-F-serratus_M_contig71:340984..341470Fucus serratus maleCDSF-serratus_M_contig71 340985..341470 -
1690964185.2675958-CDS-F-serratus_M_contig71:340984..3414701690964185.2675958-CDS-F-serratus_M_contig71:340984..341470Fucus serratus maleCDSF-serratus_M_contig71 340985..341470 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig71.18289.1

>prot_F-serratus_M_contig71.18289.1 ID=prot_F-serratus_M_contig71.18289.1|Name=mRNA_F-serratus_M_contig71.18289.1|organism=Fucus serratus male|type=polypeptide|length=381bp
MLTASCVHPPYCYVSPDFFIHAASNRALSSLRQTASMKMLSSLPYIALNF
LVVAGLRVPGRVSWVSYRATRPSYRVPSCFTSPSVHTMPATMKVESAPDH
DIYGAALTTTALAVSGAAAFGVGINHFLGTEKALQYVAGYVVEMSLSVDN
LFVFLLLFKFFKVPFDSQSRVLSYGILGAVIMRAIFIALGETAMAMFHPV
LLGFAAILLFSSYKLLSEGENDEVNDLSENWIVSLASETLDATDSYDGDN
FFTSVKGVRRATPLLLVLACIELSDVVFAIDSIPAVFAITKDPFIVYTSN
IWAIINLRSLYTLLSRAVDDLKYLRPAVAIVLGFVGTKIAGEFLGYDIPT
EVSLGIIVGLLGIGVAASLAERNADSKGSP*
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mRNA from alignment at F-serratus_M_contig71:338310..341475-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig71.18289.1 ID=mRNA_F-serratus_M_contig71.18289.1|Name=mRNA_F-serratus_M_contig71.18289.1|organism=Fucus serratus male|type=mRNA|length=3166bp|location=Sequence derived from alignment at F-serratus_M_contig71:338310..341475- (Fucus serratus male)
AAAAAATGTTGACTGCATCATGCGTTCACCCTCCGTACTGTTACGTAAGT CCTGATTTTTTCATCCACGCGGCCTCCAATAGGGCACTTAGCTCTCTACG TCAAACGGCATCGATGAAGATGCTGTCATCATTACCTTATATAGCCTTAA ACTTTTTGGTTGTGGCGGGACTCCGAGTTCCTGGCAGAGTAAGCTGGGTG TCATACCGAGCCACCCGACCTTCGTACAGAGTCCCGTCATGTTTTACCTC TCCTTCGGTGCATACCATGCCGGCGACGATGAAGGTTGAAAGTGCCCCGG ATCATGATATTTACGGGGCTGCTTTGACCACAACAGCTCTGGCGGTCAGT GGAGCAGCGGCGTTTGGCGTAGGAATCAATCACTTTCTTGGCACTGAAAA GGCTCTGCAATACGTGGCAGGGTACGTGGTGGAGATGAGCCTTTCTGTTG ACAACCTCTTCGTGTTCTTGTTACTTTTCAAGTTCTTCAAGGTGAGGAAA CGACGGCCAACACTTAATTTACGGTAACTTCGTTGTGCAATACTAGTCAA GTACTCGTTGATCGCCTAGGGAAGACAACCCAAAGTATAAGAGAAGCTGT GAAATATTCTGGAAATATTCCGCCATATTGACCCTTTTGCAGGTTCCGTT CGACTCGCAAAGTCGGGTCCTGTCGTATGGCATCCTAGGAGCGGTAATTA TGCGGGCGATTTTCATCGCACTGGGGGAGACGGCGATGGCGATGTTCCAT CCTGTTCTTCTGGGGTTTGCAGCGATTCTCCTTTTTTCGTCATATAAGCT CCTTTCCGAAGGAGAAAATGACGAAGTTAATGATCTCAGCGAAAACTGGA TCGTTTCACTAGCTTCGGAAACCCTGGATGCGACAGACTCGTATGACGGC GATAACTTCTTTACATCGGTACGTTTAAAACATGAGAGCTTCGTTGCCGC ACTCCAGTCAGCCCTTCAAACTGCTGCTTGCCATCCTAAAAAACTGAGCA CTGACTTGTAAATGCAGCATAATGCATAATGTGGAGCATGGGGAAAAATA GTAGAAAATTAGTAATTTCTGTCCCGTGAGGCCAATCTTTGTAGGAGACA GAAACGACGGTAAAAAAACATGACATTTCTGTGGCGAAATTTTTGTAAAC GGTGCGCTATGGGCCCCAAAGACGGAAATTCCGCCCTACAAAAATTGCGA AATTCTGTGGGAGGCTTTTTCTGCCGACCTACAGAAATTGGGCTAAATTC TGTAGGTGGCTCAACAAGTTTACTTCGCCACAGAAATGACTCACGCCTTC CCAAGCACGATTGGGAGGTCGGGACTGTAGCATCCCTCCTATCAAAGATC GGTAAAGAAGAGCTCGCGAGTGCTGTTGTACGATGGGTGCCGAGCAGCAG TAGTTGTGCGATGGTCGCTGGAGCAGCAGATTTGGAGAAAAAAATTATAG CTGTTGAGGTGATGGGCCCGGACAGGCTGATCGCCGGCAGCGGGAGCGGT TGAATGGGTGGCGCCGGAGATCAAGCAGAGACGACTGTGTACGAGCGTCC GATGGCTCACCATCGAAACGATGTCGCTCTGCGCACTCTATTTGCGATAT ACTCCTCACTGAGTACTAAACGACTCTGTCCCGTCAGACCAAATTCTCAG GCGCAAACGCGGAGAGGGAAATATTTTTTTCCCTGTACAGTTGACCACGA GCAGGACTGGCAACCTTACCCGGTTGATCCATACTCCGCGATGTGTACAT ACTTGCACCTCTCTTTGTGCGGCGATGGGTGGCAGAAAACGCCGGGGTCG ACCCACGCTATTTTTGTTTTTTTCGGCCACAGAATTCCCACATTTCTGTA GTCTTTTGTTTTGCCATAAAGAATGGCCTAATGGATCAGGACCTGCGAGA ACGGAGGGAAAATTGACTGGTGTTTCACTCGTTCAATATTCAAGTAGAGA AGAATGTGTAACACGAGTTGTGATGCCCCATAGGCACTTTGGAAAACCCC TTGTCTCTCCAAAGTTTGAACGAAAACCCTAGGAAGAATCTATTTACAAT GTTCGAATATAAGTACGTATGGATGGATAGGTCATTATTGTTAAGAATTC AAAGTCTACTCACCTTTTTCACTGACGAAGGTAAAAGGAGTACGACGGGC AACTCCTCTGCTACTTGTTCTTGCCTGCATCGAACTGAGTGACGTCGTCT TCGCGATCGACTCTATTCCTGCAGTATTCGCTATTACGAAGGTGAAGCTA CCACAACTACTGTAGACTATCAACTTATAATAATTTACTTCTGTCGAAGC TGATTTATAACGTGTACATACCCTAGGTTTACTCGTTTACCTTCTAGGGC AGGCACGTTGACTTCGAATGAATGTTGAAGAGATAATGTGAGGCGGAATT TTTTAGATCTATACTAAAAATAGTGGAATGCTTGTTTTAATATCTTATCC TAAGAGGAAAGCGGAAGTGATCAAATTTCTGCAATCCTTTGTTTAGGCGG AATTGCATCGCAATCGTAAATCGCGGAGTGAACAAGGGATAACTCAGCTT TCTATTGTAAGACCAGAGGCAGGATGAAGAACGGTACATTGTACGGTGCA AGACTCGTTGCCAAAAATAACTAACAAACACCTTGCATGTTACGATATTG TGAATGATTCCGCCGGGTGAAGAGTCTCCAGTCAGCCATCTCCCTGTGTT CAGCATCACAGATATAATTTGCCTTTGATTTTTACGGTATACTTACATTA CAGTATTATCTCCCTGCAATTCCAACGACAAAGGCTTCACATTAAAAAGC TTTAAATCCTCATCTTTCCCCATTGGATTTTAGGACCCTTTCATCGTCTA CACATCGAACATATGGGCGATCATCAACCTGAGAAGCCTGTACACGCTAC TGTCAAGAGCCGTCGACGATCTGAAGTACTTGCGGCCTGCAGTAGCCATC GTGTTGGGTTTTGTCGGCACAAAAATCGCAGGGGAGTTCTTGGGGTATGA CATACCTACGGAGGTGTCATTAGGGATTATCGTAGGGTTGCTGGGTATTG GAGTCGCAGCGAGCCTGGCCGAGCGTAATGCGGACAGTAAGGGTTCACCA TGACAGCATCTCTAGCCATTCGACCTCCTCCTTCAGCAAACGTTACAACA TCCTCCGCCACCATCG
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Coding sequence (CDS) from alignment at F-serratus_M_contig71:338310..341475-

>mRNA_F-serratus_M_contig71.18289.1 ID=mRNA_F-serratus_M_contig71.18289.1|Name=mRNA_F-serratus_M_contig71.18289.1|organism=Fucus serratus male|type=CDS|length=2286bp|location=Sequence derived from alignment at F-serratus_M_contig71:338310..341475- (Fucus serratus male)
ATGTTGACTGCATCATGCGTTCACCCTCCGTACTGTTACGTAAGTCCTGA
TTTTTTCATCCACGCGGCCTCCAATAGGGCACTTAGCTCTCTACGTCAAA
CGGCATCGATGAAGATGCTGTCATCATTACCTTATATAGCCTTAAACTTT
TTGGTTGTGGCGGGACTCCGAGTTCCTGGCAGAGTAAGCTGGGTGTCATA
CCGAGCCACCCGACCTTCGTACAGAGTCCCGTCATGTTTTACCTCTCCTT
CGGTGCATACCATGCCGGCGACGATGAAGGTTGAAAGTGCCCCGGATCAT
GATATTTACGGGGCTGCTTTGACCACAACAGCTCTGGCGGTCAGTGGAGC
AGCGGCGTTTGGCGTAGGAATCAATCACTTTCTTGGCACTGAAAAGGCTC
TGCAATACGTGGCAGGGTACGTGGTGGAGATGAGCCTTTCTGTTGACAAC
CTCTTCGTGTTCTTGTTACTTTTCAAGTTCTTCAAGATGTTGACTGCATC
ATGCGTTCACCCTCCGTACTGTTACGTAAGTCCTGATTTTTTCATCCACG
CGGCCTCCAATAGGGCACTTAGCTCTCTACGTCAAACGGCATCGATGAAG
ATGCTGTCATCATTACCTTATATAGCCTTAAACTTTTTGGTTGTGGCGGG
ACTCCGAGTTCCTGGCAGAGTAAGCTGGGTGTCATACCGAGCCACCCGAC
CTTCGTACAGAGTCCCGTCATGTTTTACCTCTCCTTCGGTGCATACCATG
CCGGCGACGATGAAGGTTGAAAGTGCCCCGGATCATGATATTTACGGGGC
TGCTTTGACCACAACAGCTCTGGCGGTCAGTGGAGCAGCGGCGTTTGGCG
TAGGAATCAATCACTTTCTTGGCACTGAAAAGGCTCTGCAATACGTGGCA
GGGTACGTGGTGGAGATGAGCCTTTCTGTTGACAACCTCTTCGTGTTCTT
GTTACTTTTCAAGTTCTTCAAGGTTCCGTTCGACTCGCAAAGTCGGGTCC
TGTCGTATGGCATCCTAGGAGCGGTAATTATGCGGGCGATTTTCATCGCA
CTGGGGGAGACGGCGATGGCGATGTTCCATCCTGTTCTTCTGGGGTTTGC
AGCGATTCTCCTTTTTTCGTCATATAAGCTCCTTTCCGAAGGAGAAAATG
ACGAAGTTAATGATCTCAGCGAAAACTGGATCGTTTCACTAGCTTCGGAA
ACCCTGGATGCGACAGACTCGTATGACGGCGATAACTTCTTTACATCGGT
TCCGTTCGACTCGCAAAGTCGGGTCCTGTCGTATGGCATCCTAGGAGCGG
TAATTATGCGGGCGATTTTCATCGCACTGGGGGAGACGGCGATGGCGATG
TTCCATCCTGTTCTTCTGGGGTTTGCAGCGATTCTCCTTTTTTCGTCATA
TAAGCTCCTTTCCGAAGGAGAAAATGACGAAGTTAATGATCTCAGCGAAA
ACTGGATCGTTTCACTAGCTTCGGAAACCCTGGATGCGACAGACTCGTAT
GACGGCGATAACTTCTTTACATCGGTAAAAGGAGTACGACGGGCAACTCC
TCTGCTACTTGTTCTTGCCTGCATCGAACTGAGTGACGTCGTCTTCGCGA
TCGACTCTATTCCTGCAGTATTCGCTATTACGAAGGTAAAAGGAGTACGA
CGGGCAACTCCTCTGCTACTTGTTCTTGCCTGCATCGAACTGAGTGACGT
CGTCTTCGCGATCGACTCTATTCCTGCAGTATTCGCTATTACGAAGGACC
CTTTCATCGTCTACACATCGAACATATGGGCGATCATCAACCTGAGAAGC
CTGTACACGCTACTGTCAAGAGCCGTCGACGATCTGAAGTACTTGCGGCC
TGCAGTAGCCATCGTGTTGGGTTTTGTCGGCACAAAAATCGCAGGGGAGT
TCTTGGGGTATGACATACCTACGGAGGTGTCATTAGGGATTATCGTAGGG
TTGCTGGGTATTGGAGTCGCAGCGAGCCTGGCCGAGCGTAATGCGGACAG
TAAGGGTTCACCATGAGACCCTTTCATCGTCTACACATCGAACATATGGG
CGATCATCAACCTGAGAAGCCTGTACACGCTACTGTCAAGAGCCGTCGAC
GATCTGAAGTACTTGCGGCCTGCAGTAGCCATCGTGTTGGGTTTTGTCGG
CACAAAAATCGCAGGGGAGTTCTTGGGGTATGACATACCTACGGAGGTGT
CATTAGGGATTATCGTAGGGTTGCTGGGTATTGGAGTCGCAGCGAGCCTG
GCCGAGCGTAATGCGGACAGTAAGGGTTCACCATGA
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