mRNA_F-serratus_M_contig71.18289.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig71.18289.1 vs. uniprot
Match: A0A6H5LB61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB61_9PHAE) HSP 1 Score: 387 bits (995), Expect = 2.370e-130 Identity = 204/280 (72.86%), Postives = 235/280 (83.93%), Query Frame = 3
Query: 273 ATMKVESAPDHDIYGAALTTTALAVSGAAAFGVGINHFLGTEKALQYVAGYVVEMSLSVDNLFVFLLLFKFFKVPFDSQSRVLSYGILGAVIMRAIFIALGETAMAMFHPVLLGFAAILLFSSYKLLSEGENDEVNDLSENWIVSLASETLDATDSYDGDNFFTSVKGVRRATPLLLVLACIELSDVVFAIDSIPAVFAITKDPFIVYTSNIWAIINLRSLYTLLSRAVDDLKYLRPAVAIVLGFVGTKIAGEFLGYDIPTEVSLGIIVGLLGIGVAASL 1112
+T VE A D D Y AA+ TTA A GA AFG G+N LG +KALQ+ AGYVVEMSLSVDNLFVFLLLFKFFKVPFD+Q+RVL+YGI+GAV+MRAIFI LGE M++FHP+LLGFA ILL+SSY LLSE E D DLS+N +++ AS TLDAT+SYDGD FFT V GVRRATPLLLVL C+ELSD+VFA+DSIPAVFA+TKDPFIVYTSNIWAI+NLRSL+TLL+ AV+DL YLRPAVA VLGFVG KI GEF GY++ TE+SL II G+L GVAASL
Sbjct: 65 STTMVERA-DPDRYVAAIATTAAATIGAIAFGAGVNEALGIDKALQFFAGYVVEMSLSVDNLFVFLLLFKFFKVPFDAQNRVLTYGIIGAVVMRAIFIGLGEATMSVFHPILLGFAGILLYSSYTLLSESEGDGDEDLSDNKLIAFASSTLDATESYDGDKFFTMVDGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAAVLGFVGCKIGGEFFGYNVSTELSLEIITGVLAAGVAASL 343
BLAST of mRNA_F-serratus_M_contig71.18289.1 vs. uniprot
Match: A0A835YKR2_9STRA (Integral membrane protein TerC family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKR2_9STRA) HSP 1 Score: 328 bits (842), Expect = 4.500e-107 Identity = 175/286 (61.19%), Postives = 219/286 (76.57%), Query Frame = 3
Query: 279 MKVESAPDHDIYGAALTTTALAVSGAAAFGVGINHFLGTEKALQYVAGYVVEMSLSVDNLFVFLLLFKFFKVPFDSQSRVLSYGILGAVIMRAIFIALGETAMAMFHPVLLGFAAILLFSSYKLLSEGENDEVNDLSENWIVSLASETLDATDSYDGDNFFTSVKGVRRATPLLLVLACIELSDVVFAIDSIPAVFAITKDPFIVYTSNIWAIINLRSLYTLLSRAVDDLKYLRPAVAIVLGFVGTKIAGEFLGYDIPTEVSLGIIVGLLGIGVAASLAERNADSK 1136
M + PD D Y A+ + ++++ AAAFG GI+ G+E A+ Y AGYVVE SLSVDNLFVFLLLF++F VP Q RVL +GI+GAVI+R +FIALGE A+ F PVLLGFAAIL+ S+YKL +E E E DL++N +V +S+ L ATD YDGD FFT V GVRRATPLLLVL C+ELSD+VFA+DSIPAVF T+DPF+VYTSNI+AI+NLRSLYT+LS AV DL+YLRPAVA VL FVG K+A E+ GY++ T +SLG+I LLG GVA SL + + + +
Sbjct: 72 MPRDETPDPDRYKVAVRNSLISIAAAAAFGAGISVVQGSEAAVGYFAGYVVEQSLSVDNLFVFLLLFEYFNVPISYQQRVLRWGIVGAVILRGVFIALGEAALESFQPVLLGFAAILMVSAYKLFTEEEGGEA-DLTDNQVVQFSSKILKATDQYDGDKFFTMVDGVRRATPLLLVLVCVELSDLVFAVDSIPAVFGCTRDPFLVYTSNIFAIVNLRSLYTVLSNAVGDLEYLRPAVAGVLAFVGAKLAAEYFGYEVDTLLSLGVISTLLGGGVALSLLKGDEEGE 356
BLAST of mRNA_F-serratus_M_contig71.18289.1 vs. uniprot
Match: A0A835YPV1_9STRA (Integral membrane protein TerC family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPV1_9STRA) HSP 1 Score: 318 bits (815), Expect = 6.460e-104 Identity = 171/279 (61.29%), Postives = 207/279 (74.19%), Query Frame = 3
Query: 285 VESAPDHDIYGAALTTTALAVSGAAAFGVGINHFLGTEKALQYVAGYVVEMSLSVDNLFVFLLLFKFFKVPFDSQSRVLSYGILGAVIMRAIFIALGETAMAMFHPVLLGFAAILLFSSYKLLSEGENDEVNDLSENWIVSLASETLDATDSYDGDNFFTSVKGVRRATPLLLVLACIELSDVVFAIDSIPAVFAITKDPFIVYTSNIWAIINLRSLYTLLSRAVDDLKYLRPAVAIVLGFVGTKIAGEFLGYDIPTEVSLGIIVGLLGIGVAASLAER 1121
+E PD + Y AL T L+++GAA FG GI + GTE AL+Y AGY+VE SLSVDNLFVFLLLF++F VP Q RVL +GI+GAVI+R IF+ALG+ A+ F PVLL FA ILL SSYKLL+EG + E L N IV ++ L AT+ YDGD FFT V G+RRATPLLLVL C+E SD+VFA+DSIPAVF +TKDP IVY+SNI+AI+NLRSLYT+LS AV DL YLRPAVA+VL FVG K+ E+ + T +SLGII +L GV SL ER
Sbjct: 5 LEEPPDPNRYATALRNTLLSIAGAALFGAGITYVKGTELALEYFAGYIVEQSLSVDNLFVFLLLFEYFSVPVAYQGRVLQWGIIGAVILRGIFVALGQAALESFQPVLLIFAGILLVSSYKLLTEGGDGEEESLHNNKIVQVSKRLLRATEEYDGDRFFTMVDGMRRATPLLLVLVCVEASDLVFAVDSIPAVFGVTKDPLIVYSSNIFAILNLRSLYTVLSTAVGDLVYLRPAVALVLAFVGLKLGAEYFSVTVDTVLSLGIISTILAGGVGLSLYER 283
BLAST of mRNA_F-serratus_M_contig71.18289.1 vs. uniprot
Match: A0A7S0HY79_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HY79_9CRYP) HSP 1 Score: 305 bits (781), Expect = 9.250e-98 Identity = 162/276 (58.70%), Postives = 209/276 (75.72%), Query Frame = 3
Query: 312 YGAALTTTALAVSGAAAFGVGINHFLGTEKALQYVAGYVVEMSLSVDNLFVFLLLFKFFKVPFDSQSRVLSYGILGAVIMRAIFIALGETAMAMFHPVLLGFAAILLFSSYKLLSEGENDEVN-DLSENWIVSLASETLDATDSYDGDNFFTSVKGVRRATPLLLVLACIELSDVVFAIDSIPAVFAITKDPFIVYTSNIWAIINLRSLYTLLSRAVDDLKYLRPAVAIVLGFVGTKIAGEFLGYDIPTEVSLGIIVGLLGIGVAASLAERNADSK 1136
Y AL TA+AVS A+AFGVGI +FLG +KAL+Y GY++E SLSVDNLFVFLLLF++FKVP Q +VLSYGI GAV+MRA FI+ G A+ F VLL FA +L++SS+K+LS GE +E N D+SEN IV AS+ + AT YDGD FFT V GV++ATPL LVL C+E SDV+FA+DSIPAVF +T+DP IV TSNI+AI++LR+LY +L++ DLKYL AV VLGFVG K+ GE+ G+++P + SL +++GLL GV AS+ E+ K
Sbjct: 47 YKTALRDTAIAVSLASAFGVGIWNFLGADKALEYFTGYLLEESLSVDNLFVFLLLFEYFKVPQYQQKKVLSYGIWGAVVMRAAFISAGLVAIQQFRGVLLVFAGLLMYSSFKMLSGGEEEEENADVSENSIVKFASKLVQATPEYDGDKFFTIVDGVKKATPLFLVLLCVEFSDVMFAVDSIPAVFGVTEDPLIVLTSNIFAIMSLRALYQVLAQLAKDLKYLETAVGAVLGFVGLKLVGEYFGFELPEQASLSVVIGLLTAGVGASIYEKRQTFK 322
BLAST of mRNA_F-serratus_M_contig71.18289.1 vs. uniprot
Match: A4S7T9_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S7T9_OSTLU) HSP 1 Score: 299 bits (766), Expect = 9.910e-97 Identity = 159/287 (55.40%), Postives = 212/287 (73.87%), Query Frame = 3
Query: 279 MKVESAPDHDIYGAALTTTALAVSGAAAFGVGINHFLGTEKALQYVAGYVVEMSLSVDNLFVFLLLFKFFKVPFDSQSRVLSYGILGAVIMRAIFIALGETAMAMFHPVLLGFAAILLFSSYKLLSEGENDEVNDLSENWIVSLASETLDATDSYDGDNFFTSVKGVRRATPLLLVLACIELSDVVFAIDSIPAVFAITKDPFIVYTSNIWAIINLRSLYTLLSRAVDDLKYLRPAVAIVLGFVGTKIAGEFLGYDIPTEVSLGIIVGLLGIGVAASLAERNADSKG 1139
M E+ + D+ A+ L VS AFG GI G +KA +Y AGY++E SLSVDNLFVF+LLF++FKVP + Q+RVL+YGI+GA++MRA+ + G + F P+LL FA IL+FSSYKLL+EGE +E D+ +N IV L+ ++ YDGDNFFT GV+ ATPLLLVLA +E+SDVVFA+DSIPAVF +TKDPFIVYTSN++AI++LR LYTL+S+AV +LKYL+ AVA+VLGF+G K+ E+ G ++PTE SL ++V +LG GV ASL + D +G
Sbjct: 1 MTSEAKQNRDV---AIVAACLGVS--CAFGAGIGAVEGADKASEYFAGYLLEQSLSVDNLFVFVLLFEYFKVPPERQTRVLNYGIVGALVMRAVMVGAGVELIENFQPILLVFAGILIFSSYKLLAEGEEEE-EDMGDNAIVKFVGNFLEVSEDYDGDNFFTVQNGVKMATPLLLVLAVVEISDVVFAVDSIPAVFGVTKDPFIVYTSNLFAILSLRQLYTLISKAVGELKYLQTAVALVLGFIGAKMIVEYAGVEVPTEASLAVVVTMLGGGVGASLMLPSEDKEG 281
BLAST of mRNA_F-serratus_M_contig71.18289.1 vs. uniprot
Match: A0A7S2V8N4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8N4_9STRA) HSP 1 Score: 301 bits (771), Expect = 3.370e-96 Identity = 157/271 (57.93%), Postives = 206/271 (76.01%), Query Frame = 3
Query: 321 ALTTTALAVSGAAAFGVGINHFLGTEKALQYVAGYVVEMSLSVDNLFVFLLLFKFFKVPFDSQSRVLSYGILGAVIMRAIFIALGETAMAMFHPVLLGFAAILLFSSYKLLSE---GENDEVNDLSENWIVSLASETLDATDSYDGDNFFTSVKGVRRATPLLLVLACIELSDVVFAIDSIPAVFAITKDPFIVYTSNIWAIINLRSLYTLLSRAVDDLKYLRPAVAIVLGFVGTKIAGEFLGYDIPTEVSLGIIVGLLGIGVAASLAERN 1124
AL T+LAV AA FG GI F G E L++ AGY+VE SLSVDNLFVFLLLFK+F+VP +++VL++GI GA+++R I I +G A+ +F P+ L FAA+L +SSYK+L+E GE +E DL +N I+ LAS+ L +D YDG FFT V GV+ ATPLLL L C+ELSD+VFA+DS+PAVF +TKDPFIVYTSNI+AI+ LRSLYT+LS+AV +L YL+PAV IVLGF+G+K+ E+ GY+I T VSLG++ LLG GV S+ ++
Sbjct: 101 ALKQTSLAVVSAAMFGAGIFWFKGVESGLEFAAGYLVEQSLSVDNLFVFLLLFKYFQVPKCYENQVLNWGIFGALLLRGIMIGIGVEAVELFQPIFLVFAAVLAYSSYKILAEWVTGEGEEEEDLEDNAIIKLASKVLTVSDEYDGGKFFTVVDGVKVATPLLLCLVCVELSDIVFAVDSVPAVFGVTKDPFIVYTSNIFAILGLRSLYTVLSKAVSELDYLQPAVGIVLGFIGSKLGLEYYGYEISTGVSLGVVAALLGGGVGLSVLTKS 371
BLAST of mRNA_F-serratus_M_contig71.18289.1 vs. uniprot
Match: A0A096PAW2_OSTTA (Integral membrane protein TerC,riboswitch-linked n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096PAW2_OSTTA) HSP 1 Score: 292 bits (748), Expect = 4.840e-94 Identity = 150/251 (59.76%), Postives = 196/251 (78.09%), Query Frame = 3
Query: 360 AFGVGINHFLGTEKALQYVAGYVVEMSLSVDNLFVFLLLFKFFKVPFDSQSRVLSYGILGAVIMRAIFIALGETAMAMFHPVLLGFAAILLFSSYKLLSEGENDEVNDLSENWIVSLASETLDATDSYDGDNFFTSVKGVRRATPLLLVLACIELSDVVFAIDSIPAVFAITKDPFIVYTSNIWAIINLRSLYTLLSRAVDDLKYLRPAVAIVLGFVGTKIAGEFLGYDIPTEVSLGIIVGLLGIGVAASL 1112
AFG I G++ A +Y AGY++E SLSVDNLFVF+LLF++F+VP Q VL+YGI GA+IMRA+ I G + F P+LL FA IL+FSSYKL+S+G++DE D+++N +V S+ D +D YDGDNFFT GV+ ATPLLLVLA +E+SDVVFA+DSIPAVF +TKDPFIVYTSN++AI++LR LYTL+S AV +LKYL+ AVA+VLGF+G+K+ E+ G +IPTE+SL ++V LL GVAASL
Sbjct: 21 AFGAAIGATSGSDAASEYFAGYLLEQSLSVDNLFVFVLLFEYFQVPPARQKVVLNYGIFGALIMRAVMIVAGVELIENFKPILLVFAGILIFSSYKLISQGDSDEEEDMADNAVVKFCSKLFDVSDDYDGDNFFTVQNGVKMATPLLLVLAVVEISDVVFAVDSIPAVFGVTKDPFIVYTSNLFAILSLRQLYTLISTAVGELKYLQTAVALVLGFIGSKMVVEYTGVEIPTELSLAVVVTLLSGGVAASL 271
BLAST of mRNA_F-serratus_M_contig71.18289.1 vs. uniprot
Match: C1EER2_MICCC (Uncharacterized protein (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EER2_MICCC) HSP 1 Score: 291 bits (744), Expect = 1.070e-93 Identity = 152/259 (58.69%), Postives = 195/259 (75.29%), Query Frame = 3
Query: 345 VSGAAAFGVGINHFLGTEKALQYVAGYVVEMSLSVDNLFVFLLLFKFFKVPFDSQSRVLSYGILGAVIMRAIFIALGETAMAMFHPVLLGFAAILLFSSYKLLSEGENDEVNDLSENWIVSLASETLDATDSYDGDNFFTSVKGVRRATPLLLVLACIELSDVVFAIDSIPAVFAITKDPFIVYTSNIWAIINLRSLYTLLSRAVDDLKYLRPAVAIVLGFVGTKIAGEFLGYDIPTEVSLGIIVGLLGIGVAASLAER 1121
V A AFG+G+ +G EKA ++ AGY++E SLSVDNLFVF+L+F +FKVP SQ RVL+YGI GA++MRA I G A+ F P+LL FA +L+FSSYKL++EGE +E D+SEN IV S L + YDG+NFFT+ G + ATPLLL L IELSDVVFA+DSIPAVF IT+DPFIVY+SNI+AI+ LRSL+ ++ V +L+YL+ AVA VLGFVG K+ EF G +IPTE SL ++VG+LG GVA SLA++
Sbjct: 5 VGAAVAFGLGVGAVMGAEKAEEFFAGYLLEQSLSVDNLFVFVLVFDYFKVPLASQPRVLNYGIWGAMVMRAAMIIAGYEAVTNFKPILLVFAGVLIFSSYKLIAEGEEEEEEDMSENAIVKFCSNLLPVSKDYDGENFFTTENGAKIATPLLLCLCVIELSDVVFAVDSIPAVFGITEDPFIVYSSNIFAIMGLRSLFAFVATMVAELEYLQTAVAAVLGFVGCKMVVEFGGVEIPTEASLAVVVGMLGAGVALSLAKK 263
BLAST of mRNA_F-serratus_M_contig71.18289.1 vs. uniprot
Match: A0A7S0MZU7_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MZU7_9CRYP) HSP 1 Score: 294 bits (752), Expect = 1.130e-92 Identity = 153/275 (55.64%), Postives = 202/275 (73.45%), Query Frame = 3
Query: 312 YGAALTTTALAVSGAAAFGVGINHFLGTEKALQYVAGYVVEMSLSVDNLFVFLLLFKFFKVPFDSQSRVLSYGILGAVIMRAIFIALGETAMAMFHPVLLGFAAILLFSSYKLLSEGENDEVNDLSENWIVSLASETLDATDSYDGDNFFTSVKGVRRATPLLLVLACIELSDVVFAIDSIPAVFAITKDPFIVYTSNIWAIINLRSLYTLLSRAVDDLKYLRPAVAIVLGFVGTKIAGEFLGYDIPTEVSLGIIVGLLGIGVAASLAERNADSK 1136
Y +A+ T LAVS A AFG+G+ LG KA+++ +GYVVE SLSVDNLFVF+LLF++FKV Q RVL +GI+GA ++R FIA G A+ F VLL FA L+FSS+K+L+ GE +E DLS+N +V LAS + +T YDGD FFT V GVRRATPLLLVL C+ELSDV+FA+DSIPAVF IT+DPFIV TSN++AI+ LR+L+ ++S+ + +L+YL PAV +VLGFVG K+ G F G ++P SL +I+ LLG GV S R+ + +
Sbjct: 103 YQSAIRNTGLAVSAAVAFGIGVGAVLGVPKAIEFFSGYVVEESLSVDNLFVFILLFEYFKVSQALQQRVLKWGIIGAAVLRGAFIAAGLVAIESFKGVLLVFAGFLIFSSFKILTGGEEEEEEDLSQNSVVKLASRLVQSTTEYDGDKFFTVVDGVRRATPLLLVLVCVELSDVMFAVDSIPAVFGITEDPFIVLTSNLFAILGLRALFQIISKVMKNLEYLEPAVGLVLGFVGLKMVGGFFGVEVPPAESLAVILSLLGGGVGLSYLNRHDEEE 377
BLAST of mRNA_F-serratus_M_contig71.18289.1 vs. uniprot
Match: A0A1Y1IHD0_KLENI (Integral membrane protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IHD0_KLENI) HSP 1 Score: 294 bits (752), Expect = 1.990e-92 Identity = 154/264 (58.33%), Postives = 202/264 (76.52%), Query Frame = 3
Query: 321 ALTTTALAVSGAAAFGVGINHFLGTEKALQYVAGYVVEMSLSVDNLFVFLLLFKFFKVPFDSQSRVLSYGILGAVIMRAIFIALGETAMAMFHPVLLGFAAILLFSSYKLLSEGENDEVNDLSENWIVSLASETLDATDSYDGDNFFTSVKGVRRATPLLLVLACIELSDVVFAIDSIPAVFAITKDPFIVYTSNIWAIINLRSLYTLLSRAVDDLKYLRPAVAIVLGFVGTKIAGEFLGYDIPTEVSLGIIVGLLGIGVAASL 1112
AL T A V+ AA FG G+ G KA +Y AGY++E SLSVDNLFVF+L+FK+F+VP D Q+RVLS+GI GAV+ RA+ I LG + F V L FA ILLFSS+KLL +G++DE DLS+N+IV S+ +++TD YDG+NFFT V GV+RATPLLL LA +ELSD+ FA+DSIPAVF +T DPFIV++SNI+AII LRSLYTL++ + DL++L+P++AIVLGFVG K+ EF G +PTE SL +++G+LG G+ SL
Sbjct: 173 ALITVAFWVAAAAVFGAGVGIVQGPGKASEYFAGYILEQSLSVDNLFVFVLIFKYFQVPLDYQNRVLSWGIAGAVVFRALLIGLGAATVQEFTAVNLVFAGILLFSSFKLL-QGDDDEDEDLSDNYIVKTCSKLINSTDYYDGNNFFTVVDGVKRATPLLLTLAVVELSDIAFAVDSIPAVFGVTHDPFIVFSSNIFAIICLRSLYTLVAGVMKDLRFLQPSIAIVLGFVGAKLIAEFAGLQVPTESSLAVVIGVLGSGIFLSL 435 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig71.18289.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig71.18289.1 >prot_F-serratus_M_contig71.18289.1 ID=prot_F-serratus_M_contig71.18289.1|Name=mRNA_F-serratus_M_contig71.18289.1|organism=Fucus serratus male|type=polypeptide|length=381bp MLTASCVHPPYCYVSPDFFIHAASNRALSSLRQTASMKMLSSLPYIALNFback to top mRNA from alignment at F-serratus_M_contig71:338310..341475- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig71.18289.1 ID=mRNA_F-serratus_M_contig71.18289.1|Name=mRNA_F-serratus_M_contig71.18289.1|organism=Fucus serratus male|type=mRNA|length=3166bp|location=Sequence derived from alignment at F-serratus_M_contig71:338310..341475- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig71:338310..341475- >mRNA_F-serratus_M_contig71.18289.1 ID=mRNA_F-serratus_M_contig71.18289.1|Name=mRNA_F-serratus_M_contig71.18289.1|organism=Fucus serratus male|type=CDS|length=2286bp|location=Sequence derived from alignment at F-serratus_M_contig71:338310..341475- (Fucus serratus male)back to top |