prot_F-serratus_M_contig707.18275.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig707.18275.1
Unique Nameprot_F-serratus_M_contig707.18275.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length227
Homology
BLAST of mRNA_F-serratus_M_contig707.18275.1 vs. uniprot
Match: A0A060SSE0_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SSE0_PYCCI)

HSP 1 Score: 122 bits (307), Expect = 2.080e-28
Identity = 67/156 (42.95%), Postives = 98/156 (62.82%), Query Frame = 0
Query:    2 ALQATLDVSEPRNRRQAMESHEWDEWRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATTAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNQ 157
            A  A+    EPR  ++AM   + ++W+ A   E+L   +  +YD+V RP+++ V+  K +++ K G DGKI+KYK RLVA+GF QVEGV YT+ ++P    ASIRMLLA  A  D E+   D + AFL  D++EEI++E P  FQ+    V RL +
Sbjct:  954 AYHASTFSDEPRTYQEAMSRPDAEQWKAACAEELLSFAKAELYDEVERPRNRKVVDCKWVFRIKHGPDGKIQKYKARLVAKGFTQVEGVDYTDTFAPVTKFASIRMLLAFAAKHDLEVHQMDVKSAFLNGDLEEEIFMEAPPGFQQDKAHVWRLQK 1109          
BLAST of mRNA_F-serratus_M_contig707.18275.1 vs. uniprot
Match: A0A4Y9XTU1_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Fomitopsis rosea TaxID=34475 RepID=A0A4Y9XTU1_9APHY)

HSP 1 Score: 120 bits (302), Expect = 9.620e-28
Identity = 65/147 (44.22%), Postives = 94/147 (63.95%), Query Frame = 0
Query:   11 EPRNRRQAMESHEWDEWRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATTAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNQ 157
            +PR  ++AM   + + W+ A   E+L   +  +YD+V RP+++ V+G K ++K K G DG+IEKYK RLVA+GF QVE V Y E ++PT   ++IR LLA  AA D E+   D + AFL  D+DEEIY+  P  F++ P  V RL +
Sbjct:  948 DPRTYKEAMSRPDAECWKAACAEELLSFTKAELYDEVERPRNRKVVGCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEDVDYDETFAPTTKFSTIRTLLALAAAHDLEIHQMDVKSAFLNGDLDEEIYMACPPGFEDRPDIVWRLRK 1094          
BLAST of mRNA_F-serratus_M_contig707.18275.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK)

HSP 1 Score: 120 bits (302), Expect = 9.680e-28
Identity = 62/140 (44.29%), Postives = 91/140 (65.00%), Query Frame = 0
Query:   18 AMESHEWDEWRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATTAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNQ 157
            AM   +  EWRKA E E+    +  V+++V RP+D+ +IG+K ++K K G DG++EKYK RLVAQGF QVEG+ Y E ++P   + SIR+LLA  A  D E+   D + AFL  +++EEIY+++P   +    AV RL +
Sbjct: 1001 AMSQEDAAEWRKACEAELEMFKQLGVFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVPPGHKASADAVWRLKK 1140          
BLAST of mRNA_F-serratus_M_contig707.18275.1 vs. uniprot
Match: A0A438FXG1_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438FXG1_VITVI)

HSP 1 Score: 120 bits (300), Expect = 1.440e-27
Identity = 82/248 (33.06%), Postives = 124/248 (50.00%), Query Frame = 0
Query:   10 SEPRNRRQAMESHEWDEWRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATTAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPG---------AVGRLNQGHLRTHWG---ITYGGQGCGLCMEAYT------------------DSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYV 227
            ++P +  Q M   E + W  A + EM  M  N V+D V  P     IG K ++K K    G IE+YK +LV++GF Q EG+ YTE +SP     S+ ++LA  A  D EL+  + + AFL  +++EE+Y++ PE F    G         ++  L Q   +  W    ++   +      + YT                  DSDF  C+D+R+S+S  + MLA GAISW S  Q +TA  T EA+++
Sbjct:  267 NDPESFSQTMSCKESELWYNAMKDEMSSMKCNDVWDLVELPNGAKTIGCKWVFKTKKDSLGNIERYKAKLVSKGFTQKEGIDYTETFSPVSKKDSLHIILALVAHFDFELQQMNVKTAFLNGELEEEVYMKQPEGFPSSDGEQLACKLKKSIYGLKQASCQWIWVRHLMSLALRSIETDFKVYTRPDIAFAVGMLGRYQSNPDSDFAGCVDSRKSISRYIFMLADGAISWRSVKQTMTATSTMEAKFI 514          
BLAST of mRNA_F-serratus_M_contig707.18275.1 vs. uniprot
Match: A5ANL2_VITVI (Integrase catalytic domain-containing protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5ANL2_VITVI)

HSP 1 Score: 119 bits (298), Expect = 2.510e-27
Identity = 82/217 (37.79%), Postives = 115/217 (53.00%), Query Frame = 0
Query:   17 QAMESHEWDEWRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATTAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQ--EFPGAVGRLNQG----HLRTHWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYV 227
            Q  +S + ++W +A + EM  M +N V+D V  PK    IG K ++K K    G I +YK RLVA+GF Q E + Y E +S   S  S R+++A  A  D EL   D +  FL  +IDE IY+   E F+  +    V +L +       R   G     +   L +  Y+DSDF  CLD+RRS SG + MLA GAISW S  Q + A+   E E++
Sbjct:  347 QVKQSSDSEKWIEAMKDEMKSMKDNGVWDLVELPKGVKPIGCKWIFKAKHDSKGNIVRYKARLVAKGFTQKEDIDYKETFSSVSSKDSFRIIMALMAHYDLELHQMDDKTVFLNGNIDETIYMVQLENFECNDSKQLVCKLKRSIYGLSRRPDNGTESLIRSSHLEIMGYSDSDFAGCLDSRRSTSGYIFMLAGGAISWKSFKQTLIASSIMEVEFI 563          
BLAST of mRNA_F-serratus_M_contig707.18275.1 vs. uniprot
Match: A0A2N9EWH4_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EWH4_FAGSY)

HSP 1 Score: 118 bits (296), Expect = 5.530e-27
Identity = 82/228 (35.96%), Postives = 119/228 (52.19%), Query Frame = 0
Query:    9 VSEPRNRRQAMESHEWDEWRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATTAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQ---------EFPGAVGRLNQGHLRTHWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYV 227
            V +P +  QA++S +  +W  A   E+  M  N V+D V  P     IG K ++K K    GKIE+YK RLVA+GF Q EGV+Y E +S   S  S R+++A  A  D EL   D ++ FL  D+ E++Y+  P+ FQ         +   ++  L Q   +    +          +  Y D+D+    D  +S SG V MLA+GAISW S  Q +TA+ T +AEYV
Sbjct:  495 VDDPSSYSQAIQSSQSTKWIDAMVDELKSMDNNNVWDLVDLPNGCRPIGCKWVFKTKKDSTGKIERYKARLVAKGFSQKEGVNYKETFSLVSSKNSFRIVMALVAHFDFELHQMDVKKTFLNGDLIEDVYMLQPDGFQVSGNEHMVCKRKKSIYGLKQASRQWRSDL--------FEVVGYADADYAGYADDLKSTSGYVFMLARGAISWKSVKQTLTASSTVQAEYV 714          
BLAST of mRNA_F-serratus_M_contig707.18275.1 vs. uniprot
Match: A0A1S3W0J5_VIGRR (uncharacterized protein LOC106780319 n=1 Tax=Vigna radiata var. radiata TaxID=3916 RepID=A0A1S3W0J5_VIGRR)

HSP 1 Score: 116 bits (290), Expect = 3.160e-26
Identity = 78/233 (33.48%), Postives = 127/233 (54.51%), Query Frame = 0
Query:    3 LQATLDVS---EPRNRRQAMESHEWD-EWRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATTAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNQGHLR-----THWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEY 226
            L+ TL +S   EPR+ ++A E +EW  + +K    E+  + +N  +     P  K  IG + +YK K   DG I++YK RLVA+G+ Q EG+ + + +SP     ++R++LAT AAK+  L   D + AFL  D++EE+Y+E P      PG   +  Q  LR        GI +      + ++A++DSD+  C +TRRS +   + L    +SW ++ Q   +  ++EAEY
Sbjct:  349 LKYTLAISADKEPRSYKEAKEKYEWVIDMQK----ELQALQDNGTWTLTQLPPGKNSIGCRWVYKIKYKADGSIKRYKARLVAKGYTQQEGIDFLDTFSPVAKLTTVRIILATAAAKNWHLHQLDIDNAFLHGDLNEEVYMEPP------PGLDIQEGQHMLRYIKSSPSQGIFFATDS-NIQIKAFSDSDWATCPNTRRSTTEFCIFLGSSLVSWKTKKQSNVSRSSTEAEY 570          
BLAST of mRNA_F-serratus_M_contig707.18275.1 vs. uniprot
Match: A0A438GKL6_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GKL6_VITVI)

HSP 1 Score: 112 bits (279), Expect = 6.370e-26
Identity = 65/155 (41.94%), Postives = 90/155 (58.06%), Query Frame = 0
Query:   73 EKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATTAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNQGHLRTHWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYV 227
            E+YK RLVA+GF Q EG+ Y E +SP  S  S R+++A  A  D EL   D + AFL  +IDE IY+  PE F+             ++++  I    +   L +  Y+DSDF  CLD+RRS SG + MLA GA+SW S  Q + A+ T EAE++
Sbjct:   93 EQYKARLVAKGFTQKEGIDYKETFSPVSSKDSFRIIMALVAHYDLELHQMDVKTAFLNGNIDETIYMVQPENFES-----------KIQSNLSIGIVQEISHLEIVGYSDSDFAGCLDSRRSTSGYIFMLAGGAVSWKSVKQTLVASSTMEAEFI 236          
BLAST of mRNA_F-serratus_M_contig707.18275.1 vs. uniprot
Match: A0A1C7MSU6_GRIFR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Grifola frondosa TaxID=5627 RepID=A0A1C7MSU6_GRIFR)

HSP 1 Score: 115 bits (288), Expect = 6.380e-26
Identity = 62/149 (41.61%), Postives = 94/149 (63.09%), Query Frame = 0
Query:    9 VSEPRNRRQAMESHEWDEWRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATTAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNQ 157
            + +P++  +AM   + + W+ A   E+L  V+  +YD+V RP+D+ V+G K +++ K G DG+IEKYK R+VA+GF QVEGV YT+ ++P    ASIR LLA  A  D E+   D + AFL  ++DEEI++  P  FQ     V +L +
Sbjct:  279 LDDPQSYEEAMSRPDAERWKAACAEELLTFVKAELYDEVERPRDRKVVGCKWVFRIKRGPDGEIEKYKARVVAKGFTQVEGVDYTDTFAPVTKFASIRALLALAAKLDLEIHQMDVKSAFLNGNLDEEIFMACPPGFQGARNIVWQLRK 427          
BLAST of mRNA_F-serratus_M_contig707.18275.1 vs. uniprot
Match: A0A1M2VV58_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VV58_TRAPU)

HSP 1 Score: 115 bits (288), Expect = 7.170e-26
Identity = 65/152 (42.76%), Postives = 91/152 (59.87%), Query Frame = 0
Query:    6 TLDVSEPRNRRQAMESHEWDEWRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATTAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNQ 157
            TLD  EP    +AM   + D W+ A   E+    +  +YD+V +P+ + V+G K ++K K G DG IEKYK RLVA+GF QVEG+ YT+ ++P    ASIR +LA  A  D ++   D + AFL  D+DEEIY+  P  F    G+V RL +
Sbjct:  984 TLD-GEPLTYEEAMSRPDADMWKAACAEELFAFAKAELYDEVEKPRGRKVVGCKWVFKIKRGPDGSIEKYKARLVAKGFTQVEGIDYTDTFAPVSKFASIRTVLALAAMYDLDVDQMDVKSAFLNGDLDEEIYMTCPPGFDHDAGSVWRLRK 1134          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig707.18275.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A060SSE0_PYCCI2.080e-2842.95Integrase catalytic domain-containing protein n=1 ... [more]
A0A4Y9XTU1_9APHY9.620e-2844.22Integrase catalytic domain-containing protein n=1 ... [more]
A0A0C2WN23_AMAMK9.680e-2844.29Integrase catalytic domain-containing protein (Fra... [more]
A0A438FXG1_VITVI1.440e-2733.06Retrovirus-related Pol polyprotein from transposon... [more]
A5ANL2_VITVI2.510e-2737.79Integrase catalytic domain-containing protein n=1 ... [more]
A0A2N9EWH4_FAGSY5.530e-2735.96Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A1S3W0J5_VIGRR3.160e-2633.48uncharacterized protein LOC106780319 n=1 Tax=Vigna... [more]
A0A438GKL6_VITVI6.370e-2641.94Retrovirus-related Pol polyprotein from transposon... [more]
A0A1C7MSU6_GRIFR6.380e-2641.61Retrovirus-related Pol polyprotein from transposon... [more]
A0A1M2VV58_TRAPU7.170e-2642.76Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 43..157
e-value: 1.5E-23
score: 83.7
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 17..146
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 17..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig707contigF-serratus_M_contig707:215890..217165 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig707.18275.1mRNA_F-serratus_M_contig707.18275.1Fucus serratus malemRNAF-serratus_M_contig707 215890..217165 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig707.18275.1 ID=prot_F-serratus_M_contig707.18275.1|Name=mRNA_F-serratus_M_contig707.18275.1|organism=Fucus serratus male|type=polypeptide|length=227bp
MALQATLDVSEPRNRRQAMESHEWDEWRKAEETEMLGMVENCVYDQVARP
KDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTP
SAASIRMLLATTAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPG
AVGRLNQGHLRTHWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVL
MLAKGAISWHSRMQEVTAAGTSEAEYV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like