prot_F-serratus_M_contig124.1824.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig124.1824.1
Unique Nameprot_F-serratus_M_contig124.1824.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length517
Homology
BLAST of mRNA_F-serratus_M_contig124.1824.1 vs. uniprot
Match: D7G690_ECTSI (NOT2_3_5 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G690_ECTSI)

HSP 1 Score: 480 bits (1235), Expect = 2.190e-162
Identity = 282/386 (73.06%), Postives = 304/386 (78.76%), Query Frame = 0
Query:  120 GQRAMHDTLSYNSAPPDVLTGVGNTGAGRFSCITSQRGQQLAMDG-GAGPSGFSGMGGG---NDLSAHALGGGGGGAXXXXXXXXXXXXXXXXXXXXGHSSVSFDLKEFPVLGSGMANLNLGGNEEGYSRQAYRGEPQGFSMHNDDFPALPVATPSLSGQTGSAALGGTAFHPPSTSEGMGAGALRGAPGQARPMGPGVAGGPTAAAVVAATEGKAKKYGLLGLLGVIRMTDPDLNMLALGSDLTTVGLNLDSAEVLYATFASPWAEKPAIPEPQYSLPGCYYLQPPPLKPMHLKKFQLETLFYIFYSMPQDAYQASLRRSDPGRRYSAYAAQELYTREWRFHSVLKLWFKRVTSADGNVPPGVQYIYFDQKEWERQYFAGNAQMI 501
            GQRAM D + Y +   D+L+ VGN               QLAMDG GAG + F G       NDL AH L       XXXXXXXXXXXXXXXXXX  GHSS+SFD+KEFP LGSGMANLNLGG EEGYSRQAYRGEPQGFSM +DDFPALPVA PS +G TGS+ALGG  FHPP+ +EGMGAGALRGAPGQ RPMGPG+AGGPTAAAVVAA+EGKAKKYGLLGLLGVIRMTDPDLN LALGSDLTTVGLNLDSAEVLYA+FASPWAE+PA PEPQ++LP CYYLQPPPLKPMHLK FQLETLFYIFYSMPQD  QA             YAAQEL+ REWRF SVLKLWFKRV  ADGNVPP V+YIYFD  EW+RQ+FAGN QMI
Sbjct:  142 GQRAMQDGMPYPAT--DLLSTVGNNKGATNMASQRLNAGQLAMDGAGAGLTPFGGXXXXXXXNDLGAHGLXXXX--XXXXXXXXXXXXXXXXXXXPGGHSSLSFDMKEFPALGSGMANLNLGGGEEGYSRQAYRGEPQGFSMQSDDFPALPVAAPSAAGPTGSSALGGATFHPPTATEGMGAGALRGAPGQPRPMGPGIAGGPTAAAVVAASEGKAKKYGLLGLLGVIRMTDPDLNTLALGSDLTTVGLNLDSAEVLYASFASPWAEEPATPEPQFTLPSCYYLQPPPLKPMHLKNFQLETLFYIFYSMPQDVLQA-------------YAAQELHAREWRFQSVLKLWFKRVGPADGNVPPNVEYIYFDHNEWQRQFFAGNVQMI 510          
BLAST of mRNA_F-serratus_M_contig124.1824.1 vs. uniprot
Match: A0A836CGQ9_9STRA (NOT2_3_5 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGQ9_9STRA)

HSP 1 Score: 214 bits (544), Expect = 3.310e-63
Identity = 111/186 (59.68%), Postives = 130/186 (69.89%), Query Frame = 0
Query:  336 LLGLLGVIRMTDPDLNMLALGSDLTTVGLNLDSAEVLYATFASPWAEKPAIPEPQYSLPGCYYLQPPPLKPMHLKKFQLETLFYIFYSMPQDAYQASLRRSDPGRRYSAYAAQELYTREWRFHSVLKLWFKRVTSADGNVPPGVQYIYFDQKEWERQYFAGNAQMIQA-----GNGLLTEDDIRIK 516
            L GLL VIRMTDPDLNMLALGSDLTT+GLNLDS+EVLYATFA PWAE P+  EPQ+ LP CYY+QPP LK  H  KF LETLFYIFY+MP D  QA             YAAQELY R+WRFH+ LKLW KR T+AD      V++I+FD   WER+ F+G   M  A       GL++E+D+R+K
Sbjct:   25 LTGLLRVIRMTDPDLNMLALGSDLTTLGLNLDSSEVLYATFAGPWAEGPSSGEPQFQLPQCYYMQPPSLKTTHFSKFTLETLFYIFYAMPSDILQA-------------YAAQELYLRDWRFHADLKLWLKRATAADSAAQ--VRFIFFDHNVWERRGFSGPLPMSVAVGGGLTGGLMSEEDVRVK 195          
BLAST of mRNA_F-serratus_M_contig124.1824.1 vs. uniprot
Match: A0A7R9W176_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W176_9STRA)

HSP 1 Score: 221 bits (562), Expect = 6.320e-63
Identity = 110/186 (59.14%), Postives = 132/186 (70.97%), Query Frame = 0
Query:  334 YGLLGLLGVIRMTDPDLNMLALGSDLTTVGLNLDSAEVLYATFASPWAEKPAIPEPQYSLPGCYYLQPPPLKPMHLKKFQLETLFYIFYSMPQDAYQASLRRSDPGRRYSAYAAQELYTREWRFHSVLKLWFKRVTSADG---NVPPGVQYIYFDQKEWERQYFAGNAQMIQAGNGLLTEDDIRIK 516
            YGLLGLL +IRMTD D N LALGSDLT +G+NL+S++ LY+TFASPW+E P   EPQY LP CYY+QPP LK  HL KFQLETLFYIFY++P+D  QA             YAAQELY+REWR+H  LKLWFKR  ++DG       G+QYIYFD   WER+ F GN Q +  G   L+EDD+R+K
Sbjct:  255 YGLLGLLSIIRMTDADRNALALGSDLTALGMNLNSSDKLYSTFASPWSESPTTREPQYQLPMCYYMQPPALKTGHLSKFQLETLFYIFYALPKDVLQA-------------YAAQELYSREWRYHVDLKLWFKRGGASDGLAATANGGIQYIYFDVNTWERRLFNGNVQSVTGG--FLSEDDVRVK 425          
BLAST of mRNA_F-serratus_M_contig124.1824.1 vs. uniprot
Match: A0A7S2EBZ5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EBZ5_TRICV)

HSP 1 Score: 219 bits (559), Expect = 2.030e-62
Identity = 112/186 (60.22%), Postives = 131/186 (70.43%), Query Frame = 0
Query:  334 YGLLGLLGVIRMTDPDLNMLALGSDLTTVGLNLDSAEVLYATFASPWAEKPAIPEPQYSLPGCYYLQPPPLKPMHLKKFQLETLFYIFYSMPQDAYQASLRRSDPGRRYSAYAAQELYTREWRFHSVLKLWFKRVTSADG---NVPPGVQYIYFDQKEWERQYFAGNAQMIQAGNGLLTEDDIRIK 516
            +GLLGLL VIRMTD D N LALGSDLT +G+NL+S++ LY+TFASPW+E P   EPQY LP CYY+QPP LK  HL KFQLETLFYIFY++P+D  QA             YAAQELY+REWR+H  LKLWFKR   +DG       G QYIYFD   WER+ F GN Q I  G  LL+EDD+R+K
Sbjct:  261 FGLLGLLSVIRMTDADRNALALGSDLTALGMNLNSSDKLYSTFASPWSESPTTREPQYQLPMCYYMQPPALKTGHLSKFQLETLFYIFYALPRDVLQA-------------YAAQELYSREWRYHVDLKLWFKRAGPSDGLTATANGGNQYIYFDVNTWERRLFNGNVQTITGG--LLSEDDVRVK 431          
BLAST of mRNA_F-serratus_M_contig124.1824.1 vs. uniprot
Match: A0A7S0C8Q4_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C8Q4_9STRA)

HSP 1 Score: 216 bits (549), Expect = 2.560e-62
Identity = 108/183 (59.02%), Postives = 129/183 (70.49%), Query Frame = 0
Query:  334 YGLLGLLGVIRMTDPDLNMLALGSDLTTVGLNLDSAEVLYATFASPWAEKPAIPEPQYSLPGCYYLQPPPLKPMHLKKFQLETLFYIFYSMPQDAYQASLRRSDPGRRYSAYAAQELYTREWRFHSVLKLWFKRVTSADGNVPPGVQYIYFDQKEWERQYFAGNAQMIQAGNGLLTEDDIRIK 516
            YGLLGLLGVIRM+D D N LALGSDLT +GLNL+S+E LY+TFASPW++ P   EPQY LP CYY+QPP LK  HL KFQLETLFYIFY++P+D  QA             YAAQELY+R+WR+H  LKLWFKR +  D     G QYIYFD   WER+ F G+       NG L+E+D+R+K
Sbjct:  148 YGLLGLLGVIRMSDADRNALALGSDLTLLGLNLNSSEHLYSTFASPWSDSPTTREPQYQLPMCYYMQPPALKTGHLSKFQLETLFYIFYALPKDVLQA-------------YAAQELYSRDWRYHVDLKLWFKRASPVDVPNANGTQYIYFDINSWERRIFNGSMHQ-NFPNGFLSEEDVRVK 316          
BLAST of mRNA_F-serratus_M_contig124.1824.1 vs. uniprot
Match: A0A8J2SZ99_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZ99_9STRA)

HSP 1 Score: 216 bits (551), Expect = 8.530e-60
Identity = 118/194 (60.82%), Postives = 135/194 (69.59%), Query Frame = 0
Query:  333 KYGLLGLLGVIRMTDPDLNMLALGSDLTTVGLNLDSAEVLYATFASPWAEKPAIPEPQYSLPGCYYLQPPPLKPM-------HLKKFQLETLFYIFYSMPQDAYQASLRRSDPGRRYSAYAAQELYTREWRFHSVLKLWFKRVTSADGNVPPGVQYIYFDQKEWERQYFAGNAQMIQAGN---GLLTEDDIRIK 516
            KYGLLGLL VIRMT+ DLN LALGSDLTT+GLNL+S+E LY+TFASPWAE P   EPQ+SLP CYY+QPPPLK         HL KFQLETLFYIFY+MP+D  QA             YAAQELY REW++H  LKLWFKR +SADG      QYI+FD K WE + F+    M  AGN   GLL ED +R+K
Sbjct:  402 KYGLLGLLDVIRMTNADLNTLALGSDLTTLGLNLNSSECLYSTFASPWAEAPITREPQFSLPLCYYMQPPPLKTQYLSQNKSHLSKFQLETLFYIFYAMPKDVLQA-------------YAAQELYNREWQYHQDLKLWFKRSSSADGLNFSNNQYIFFDIKTWECRVFSN---MHAAGNFSSGLLHEDSVRVK 579          
BLAST of mRNA_F-serratus_M_contig124.1824.1 vs. uniprot
Match: A0A7S2YKN9_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YKN9_9STRA)

HSP 1 Score: 202 bits (514), Expect = 6.630e-59
Identity = 105/191 (54.97%), Postives = 125/191 (65.45%), Query Frame = 0
Query:  334 YGLLGLLGVIRMTDPDLNMLALGSDLTTVGLNLDSAEVLYATFASPWAEKPAIP---EPQYSLPGCYYLQPPPLKPMHLKKFQLETLFYIFYSMPQDAYQASLRRSDPGRRYSAYAAQELYTREWRFHSVLKLWFKRVTSADGNVPPGV-----QYIYFDQKEWERQYFAGNAQMIQAGNGLLTEDDIRIK 516
            YGLLGLLGVIRMTD D N LALG+DLT +GLNL SAE +Y+TF+SPW+   +     +P Y LP CYY+QPP LK  HL KFQLETLFYIFY++P+D  QA             Y+AQELY+REWR+H  LKLWFKR   +DG           QY+YFD   WER+ F GN       NG L E+DIR+K
Sbjct:    9 YGLLGLLGVIRMTDADRNALALGTDLTMLGLNLGSAEHIYSTFSSPWSSTDSTQPTKDPHYQLPSCYYMQPPALKTGHLSKFQLETLFYIFYALPKDVLQA-------------YSAQELYSREWRYHGELKLWFKRAGPSDGLAASSAASAAGQYLYFDINTWERRLFNGNMNQTMT-NGFLPEEDIRVK 185          
BLAST of mRNA_F-serratus_M_contig124.1824.1 vs. uniprot
Match: A0A7S2PH42_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PH42_9STRA)

HSP 1 Score: 203 bits (517), Expect = 2.030e-58
Identity = 108/186 (58.06%), Postives = 129/186 (69.35%), Query Frame = 0
Query:  334 YGLLGLLGVIRMTDPDLNMLALGSDLTTVGLNLDSAEVLYATFASPWAEKPAIPEPQYSLPGCYYLQPPPLKPMHLKKFQLETLFYIFYSMPQDAYQASLRRSDPGRRYSAYAAQELYTREWRFHSVLKLWFKRVTSAD---GNVPPGVQYIYFDQKEWERQYFAGNAQMIQAGNGLLTEDDIRIK 516
            YGLLGLL VIRMTD D N LALGSDLT +GLNL+S + LY+TF  P+++KPA  EP Y LP CYY+QPP LK  HL KFQLETLFYIFY++P+D  QA             YAAQELYTR+WR+H   K+WFK+ T +D   GNV  G QYIYFD   WER+ + GN     AG G L E+D+R+K
Sbjct:   84 YGLLGLLSVIRMTDADRNRLALGSDLTVLGLNLNSNDNLYSTFGGPFSDKPATREPHYQLPMCYYMQPPALKTGHLSKFQLETLFYIFYALPKDVLQA-------------YAAQELYTRDWRYHVESKVWFKQATPSDVPNGNVAAG-QYIYFDINTWERRLY-GNVNQNIAG-GFLPEEDVRVK 253          
BLAST of mRNA_F-serratus_M_contig124.1824.1 vs. uniprot
Match: A0A6U3ZWB8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ZWB8_9STRA)

HSP 1 Score: 210 bits (534), Expect = 2.600e-58
Identity = 107/179 (59.78%), Postives = 125/179 (69.83%), Query Frame = 0
Query:  341 GVIRMTDPDLNMLALGSDLTTVGLNLDSAEVLYATFASPWAEKPAIPEPQYSLPGCYYLQPPPLKPMHLKKFQLETLFYIFYSMPQDAYQASLRRSDPGRRYSAYAAQELYTREWRFHSVLKLWFKRVTSADG---NVPPGVQYIYFDQKEWERQYFAGNAQMIQAGNGLLTEDDIRIK 516
            GVIRM+D D N LALGSDLT +GLNL S++ LY+TFASPW+E P   EPQY LP CYY+QPP LK  HL KFQLETLFYIFY++P+D  QA             YAAQELY+REWR+H  LKLWFKR   ADG   N   GVQYIYFD   WER+ F GN       +GLL+EDD+R++
Sbjct:  311 GVIRMSDADRNALALGSDLTALGLNLSSSDQLYSTFASPWSESPTTREPQYQLPMCYYMQPPALKTGHLSKFQLETLFYIFYALPKDVLQA-------------YAAQELYSREWRYHVELKLWFKRAGPADGVANNAGSGVQYIYFDINSWERRLFNGNMNQ-NITSGLLSEDDVRVQ 475          
BLAST of mRNA_F-serratus_M_contig124.1824.1 vs. uniprot
Match: A0A7S2XLH6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XLH6_9STRA)

HSP 1 Score: 209 bits (532), Expect = 5.560e-58
Identity = 106/186 (56.99%), Postives = 130/186 (69.89%), Query Frame = 0
Query:  334 YGLLGLLGVIRMTDPDLNMLALGSDLTTVGLNLDSAEVLYATFASPWAEKPAIPEPQYSLPGCYYLQPPPLKPMHLKKFQLETLFYIFYSMPQDAYQASLRRSDPGRRYSAYAAQELYTREWRFHSVLKLWFKRVTSADG---NVPPGVQYIYFDQKEWERQYFAGNAQMIQAGNGLLTEDDIRIK 516
            YGLLGLLGVIRM+D D N LALGSDLT++GLNL+S++ LY+TFA PW+E P   EPQY LP CYY+QPP LK  HL KF LETLFYIFY++P+D  QA             YAAQELY+REWR+H  LKLWFKR    DG   N   G Q+++FD   WER+ F GN       +GL++E+D+R+K
Sbjct:  311 YGLLGLLGVIRMSDADRNALALGSDLTSLGLNLNSSDQLYSTFAGPWSENPTTREPQYQLPMCYYMQPPALKTGHLSKFALETLFYIFYALPKDVLQA-------------YAAQELYSREWRYHVDLKLWFKRAGPNDGVGNNGGAGNQFLFFDINTWERRIFNGNMNQ-NITSGLMSEEDVRVK 482          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig124.1824.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G690_ECTSI2.190e-16273.06NOT2_3_5 domain-containing protein n=2 Tax=Ectocar... [more]
A0A836CGQ9_9STRA3.310e-6359.68NOT2_3_5 domain-containing protein n=1 Tax=Tribone... [more]
A0A7R9W176_9STRA6.320e-6359.14Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2EBZ5_TRICV2.030e-6260.22Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S0C8Q4_9STRA2.560e-6259.02Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A8J2SZ99_9STRA8.530e-6060.82Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2YKN9_9STRA6.630e-5954.97Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S2PH42_9STRA2.030e-5858.06Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A6U3ZWB8_9STRA2.600e-5859.78Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2XLH6_9STRA5.560e-5856.99Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038635CCR4-NOT complex subunit 2/3/5, N-terminal domain superfamilyGENE3D2.30.30.1020coord: 325..500
e-value: 4.1E-45
score: 155.4
IPR007282NOT2/NOT3/NOT5, C-terminalPFAMPF04153NOT2_3_5coord: 374..492
e-value: 5.7E-18
score: 65.3
NoneNo IPR availablePANTHERPTHR23326:SF3CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 2coord: 31..491
IPR040168Not2/Not3/Not5PANTHERPTHR23326CCR4 NOT-RELATEDcoord: 31..491

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig124contigF-serratus_M_contig124:486270..494913 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig124.1824.1mRNA_F-serratus_M_contig124.1824.1Fucus serratus malemRNAF-serratus_M_contig124 485130..500704 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig124.1824.1 ID=prot_F-serratus_M_contig124.1824.1|Name=mRNA_F-serratus_M_contig124.1824.1|organism=Fucus serratus male|type=polypeptide|length=517bp
MNEASGYGGGPGGFGGGFSMHGMGGGGRSGVHGPGGGSQMPTAFSTLARS
ASRGMPGATGGGGGVSGAHGQAHGSMVGGAPGGGNGNGSGGGGGAPRDPR
EGGGGGGAGGMYMQQPAQGGQRAMHDTLSYNSAPPDVLTGVGNTGAGRFS
CITSQRGQQLAMDGGAGPSGFSGMGGGNDLSAHALGGGGGGAGGGGGGAG
GGGNGGLGGGPGGHSSVSFDLKEFPVLGSGMANLNLGGNEEGYSRQAYRG
EPQGFSMHNDDFPALPVATPSLSGQTGSAALGGTAFHPPSTSEGMGAGAL
RGAPGQARPMGPGVAGGPTAAAVVAATEGKAKKYGLLGLLGVIRMTDPDL
NMLALGSDLTTVGLNLDSAEVLYATFASPWAEKPAIPEPQYSLPGCYYLQ
PPPLKPMHLKKFQLETLFYIFYSMPQDAYQASLRRSDPGRRYSAYAAQEL
YTREWRFHSVLKLWFKRVTSADGNVPPGVQYIYFDQKEWERQYFAGNAQM
IQAGNGLLTEDDIRIK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038635CCR4-NOT_su2/3/5_N_sf
IPR007282NOT2/3/5_C
IPR040168Not2/3/5