mRNA_F-serratus_M_contig705.18261.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig705.18261.1
Unique NamemRNA_F-serratus_M_contig705.18261.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig705.18261.1 vs. uniprot
Match: Q9ARD9_FUCVE (Delta-aminolevulinic acid dehydratase n=1 Tax=Fucus vesiculosus TaxID=49266 RepID=Q9ARD9_FUCVE)

HSP 1 Score: 833 bits (2151), Expect = 1.470e-303
Identity = 417/425 (98.12%), Postives = 420/425 (98.82%), Query Frame = 1
Query:   22 MKTVPMAPSLFGVLILVTVCEAFVAPRPPLAGLAPSSFASGVGITPTCAPAGVVTSMVAAPNSISAGATETRAGAAAYNPLDGPNAPLRSNNNGEVWRPQKARPRRNRKSEAMRSMVRENIVRPANFIYPLFIHDKDFEVEIQSMPGCLRHSLPHMLEEVEEAWKFGVRTFVLFPQVPDHLKTNYGEECYNPEGIVPRAVSMIKEKFPDSIVCTDVALDPYSDQGHDGVVKDGQILNDETIMQLTKQVVCQARAGADIVAPSDMMDGRIGAIRDALDAEGFTNVSIMAYTAKYASAFYGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDAEEGADMLMVKPGMPYLDVIRRLKESSNLPIAAYHVSGEYAMMKAAVERGWLDEREAVLEAMTCFKRAGADVILTYYAKDAARWLCEDGFP 1296
            MKTVPMAP+LFG+LILVTVCEAFVAPRPPLAGLAPSSF SGVGITPTCAPAGVVTSMVAAPNSISAG TETR  AAAYNPLDGPNAPLRSNNNGEVWRPQK RPRRNRKSEAMRSMVRENIVRPANFIYPLFIHDKDFEVEIQSMPGCLRHSLPHMLEEVEEAWKFGVRTFVLFPQVPDHLKTNYGEECYNPEGIVPRAVSMIKEKFPDSIVCTDVALDPYSDQGHDGVVKDGQILNDETIMQLTKQVVCQARAGAD+VAPSDMMDGRIGAIRDALDAEGFTNVSIMAYTAKYASAFYGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDAEEGADMLMVKPGMPYLDVIRRLKESSNLPIAAYHVSGEYAMMKAAVERGWLDEREAVLEAMTCFKRAGADVILTYYAKDAARWLCEDGFP
Sbjct:    1 MKTVPMAPALFGMLILVTVCEAFVAPRPPLAGLAPSSFTSGVGITPTCAPAGVVTSMVAAPNSISAGTTETRTEAAAYNPLDGPNAPLRSNNNGEVWRPQKVRPRRNRKSEAMRSMVRENIVRPANFIYPLFIHDKDFEVEIQSMPGCLRHSLPHMLEEVEEAWKFGVRTFVLFPQVPDHLKTNYGEECYNPEGIVPRAVSMIKEKFPDSIVCTDVALDPYSDQGHDGVVKDGQILNDETIMQLTKQVVCQARAGADVVAPSDMMDGRIGAIRDALDAEGFTNVSIMAYTAKYASAFYGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDAEEGADMLMVKPGMPYLDVIRRLKESSNLPIAAYHVSGEYAMMKAAVERGWLDEREAVLEAMTCFKRAGADVILTYYAKDAARWLCEDGFP 425          
BLAST of mRNA_F-serratus_M_contig705.18261.1 vs. uniprot
Match: D8LEC7_ECTSI (Delta-aminolevulinic acid dehydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEC7_ECTSI)

HSP 1 Score: 659 bits (1699), Expect = 5.990e-235
Identity = 336/417 (80.58%), Postives = 370/417 (88.73%), Query Frame = 1
Query:   46 SLFGVLILVTVCEAFVAPRPPLAGLAPSSFASG--VGITPTCAPAGVVTSMVAAPNSISAGATETRAGAAAYNPLDGPNAPLRSNNNGEVWRPQKARPRRNRKSEAMRSMVRENIVRPANFIYPLFIHDKDFEVEIQSMPGCLRHSLPHMLEEVEEAWKFGVRTFVLFPQVPDHLKTNYGEECYNPEGIVPRAVSMIKEKFPDSIVCTDVALDPYSDQGHDGVVKDGQILNDETIMQLTKQVVCQARAGADIVAPSDMMDGRIGAIRDALDAEGFTNVSIMAYTAKYASAFYGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDAEEGADMLMVKPGMPYLDVIRRLKESSNLPIAAYHVSGEYAMMKAAVERGWLDEREAVLEAMTCFKRAGADVILTYYAKDAARWLCEDG 1290
            ++ G LI V+V +AFV P     G APS+FA+   VG TPT         MVA P+ +S     T A ++A+ P  GPNAPLR NN G+ W PQ+ARPRRNRKSEA+RSMVREN+VRPANFIYPLFIH++DFEVEI+ MPGCLRHSLPHML+EVEEAW+FGVR+FV+FP+VPD LKTNY +ECYNP GIVPRAVSMIKE+FPDSIVCTDVALDPYSDQGHDGVV+DG+ILNDETIMQLTKQVVCQARAGAD+VAPSDMMDGR+GAIRDALD+EGFT+VSI+AYTAKYASAFYGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDA EGADMLMVKPGMPYLDVIRRLKES+ LPI+AYHVSGEYAMMKAAVERGWLDER AVLEAMTCFKRAGADVILTYYAKDAARWLCEDG
Sbjct:    9 TVLGSLISVSVSDAFVVPMMAPRG-APSAFAAKNKVGGTPT---------MVATPDRVS-----TSASSSAFEPTKGPNAPLRVNNKGKAWVPQRARPRRNRKSEAVRSMVRENVVRPANFIYPLFIHEEDFEVEIKPMPGCLRHSLPHMLKEVEEAWQFGVRSFVVFPKVPDELKTNYADECYNPSGIVPRAVSMIKERFPDSIVCTDVALDPYSDQGHDGVVQDGKILNDETIMQLTKQVVCQARAGADVVAPSDMMDGRVGAIRDALDSEGFTDVSILAYTAKYASAFYGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDAAEGADMLMVKPGMPYLDVIRRLKESTPLPISAYHVSGEYAMMKAAVERGWLDERAAVLEAMTCFKRAGADVILTYYAKDAARWLCEDG 410          
BLAST of mRNA_F-serratus_M_contig705.18261.1 vs. uniprot
Match: Q9ARD2_9PHAE (Delta-aminolevulinic acid dehydratase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q9ARD2_9PHAE)

HSP 1 Score: 637 bits (1644), Expect = 1.290e-226
Identity = 309/355 (87.04%), Postives = 333/355 (93.80%), Query Frame = 1
Query:  226 TETRAGAAAYNPLDGPNAPLRSNNNGEVWRPQKARPRRNRKSEAMRSMVRENIVRPANFIYPLFIHDKDFEVEIQSMPGCLRHSLPHMLEEVEEAWKFGVRTFVLFPQVPDHLKTNYGEECYNPEGIVPRAVSMIKEKFPDSIVCTDVALDPYSDQGHDGVVKDGQILNDETIMQLTKQVVCQARAGADIVAPSDMMDGRIGAIRDALDAEGFTNVSIMAYTAKYASAFYGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDAEEGADMLMVKPGMPYLDVIRRLKESSNLPIAAYHVSGEYAMMKAAVERGWLDEREAVLEAMTCFKRAGADVILTYYAKDAARWLCEDG 1290
            T T  GA AY+P  GPNAPLR NNN + W  Q+ RPRRNRKSEAMRSM+RE +VRPANFIYPLFIHD+DFEVEI+ MPGCLRHSL HML+EVEEAWKFGVRTFV+FP+VPD LKTNY +EC+NP GIVPRAVSMIKE+FPDSIVCTDVALDPYSDQGHDGVVKDG+ILNDETIMQLTKQVVCQARAG+D+VAPSDMMDGR+GAIRDALD+EGFT+VSI+AYTAKYASAFYGPFRDALDSHPGFGDKKTYQQDPANGREAL+EAALDA EGADMLMVKPGMPYLDVI+RL+ESSNLPI+AYHVSGEYAMMKAAVERGWLDER AVLE MTCFKRAGAD ILTYYAKDAARWLCEDG
Sbjct:   54 TTTSMGADAYDPFSGPNAPLRRNNNNDAWVSQRPRPRRNRKSEAMRSMLREAVVRPANFIYPLFIHDEDFEVEIKPMPGCLRHSLSHMLKEVEEAWKFGVRTFVVFPKVPDQLKTNYADECHNPNGIVPRAVSMIKERFPDSIVCTDVALDPYSDQGHDGVVKDGKILNDETIMQLTKQVVCQARAGSDVVAPSDMMDGRVGAIRDALDSEGFTDVSILAYTAKYASAFYGPFRDALDSHPGFGDKKTYQQDPANGREALIEAALDAAEGADMLMVKPGMPYLDVIQRLRESSNLPISAYHVSGEYAMMKAAVERGWLDERAAVLETMTCFKRAGADAILTYYAKDAARWLCEDG 408          
BLAST of mRNA_F-serratus_M_contig705.18261.1 vs. uniprot
Match: A0A836CM03_9STRA (Delta-aminolevulinic acid dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM03_9STRA)

HSP 1 Score: 604 bits (1557), Expect = 1.270e-213
Identity = 290/347 (83.57%), Postives = 318/347 (91.64%), Query Frame = 1
Query:  250 AYNPLDGPNAPLRSNNNGEVWRPQKARPRRNRKSEAMRSMVRENIVRPANFIYPLFIHDKDFEVEIQSMPGCLRHSLPHMLEEVEEAWKFGVRTFVLFPQVPDHLKTNYGEECYNPEGIVPRAVSMIKEKFPDSIVCTDVALDPYSDQGHDGVVKDGQILNDETIMQLTKQVVCQARAGADIVAPSDMMDGRIGAIRDALDAEGFTNVSIMAYTAKYASAFYGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDAEEGADMLMVKPGMPYLDVIRRLKESSNLPIAAYHVSGEYAMMKAAVERGWLDEREAVLEAMTCFKRAGADVILTYYAKDAARWLCEDG 1290
            AYNPL+G  APL  NN G VW PQ+ARPRRNRKS+AMR MVRE IV PANFIYPLFIH++ ++ EI SMPGC RHSL HML+E E+AW+FGVRTFVLFP+V D+LK+NY +ECYNP GIVPRAVSMIKE+FPDSIVCTD+ALDPYSDQGHDGVVKDG+ILNDETIMQL KQ VCQARAG+D+VAPSDMMDGR+GAIRDALD+EGFT+ SI+AYTAKYASAFYGPFRDALDSHPGFGDKKTYQQDPANGREAL+EAALDA EGADMLMVKPGMPYLDVI RLK  +NLPI+AYHVSGEYAMMKAAVERGWLDER AVLE MTCFKRAGAD+ILTYYAK AA+WLCEDG
Sbjct:   47 AYNPLEGAGAPLTVNNGGNVWVPQRARPRRNRKSDAMRRMVRETIVTPANFIYPLFIHEESYQQEIPSMPGCQRHSLEHMLKECEDAWRFGVRTFVLFPKVADNLKSNYADECYNPNGIVPRAVSMIKERFPDSIVCTDIALDPYSDQGHDGVVKDGKILNDETIMQLCKQAVCQARAGSDVVAPSDMMDGRVGAIRDALDSEGFTDTSILAYTAKYASAFYGPFRDALDSHPGFGDKKTYQQDPANGREALVEAALDAAEGADMLMVKPGMPYLDVIHRLKTETNLPISAYHVSGEYAMMKAAVERGWLDERAAVLETMTCFKRAGADIILTYYAKQAAQWLCEDG 393          
BLAST of mRNA_F-serratus_M_contig705.18261.1 vs. uniprot
Match: A0A7S1UCC0_9STRA (Delta-aminolevulinic acid dehydratase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UCC0_9STRA)

HSP 1 Score: 595 bits (1534), Expect = 1.700e-209
Identity = 282/346 (81.50%), Postives = 320/346 (92.49%), Query Frame = 1
Query:  253 YNPLDGPNAPLRSNNNGEVWRPQKARPRRNRKSEAMRSMVRENIVRPANFIYPLFIHDKDFEVEIQSMPGCLRHSLPHMLEEVEEAWKFGVRTFVLFPQVPDHLKTNYGEECYNPEGIVPRAVSMIKEKFPDSIVCTDVALDPYSDQGHDGVVKDGQILNDETIMQLTKQVVCQARAGADIVAPSDMMDGRIGAIRDALDAEGFTNVSIMAYTAKYASAFYGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDAEEGADMLMVKPGMPYLDVIRRLKESSNLPIAAYHVSGEYAMMKAAVERGWLDEREAVLEAMTCFKRAGADVILTYYAKDAARWLCEDG 1290
            ++PL GP   L +NNNG VW PQ+ARPRRNRKSEA+RSMVREN+V P N IYPLFIH++DFE EI+SMPGCLRHSLPHMLEEV++AW++GVRTFVLFP+VPD LKTN GEE YNP GIVPRAVSMIKE FP++IVCTDVALDPYSDQGHDG+V+DG+ILNDETI QL KQ VCQARAG+D+VAPSDMMDGR+GAIRDALD+EGFTNVSIMAYTAKYASAFYGPFRDALDSHPGFGDKKTYQQDPANGREAL+EAALDA EGAD LMVKPGMPYLDVIRRL++++NLPIAAYHVSGEYAM+ AAVERGW+DE+  ++E++TCFKRAGAD+ILTY AK AA+W+CEDG
Sbjct:   88 FSPLSGPKPALITNNNGGVWVPQRARPRRNRKSEAVRSMVRENLVTPRNLIYPLFIHEEDFETEIESMPGCLRHSLPHMLEEVKDAWQYGVRTFVLFPKVPDELKTNRGEESYNPNGIVPRAVSMIKEAFPEAIVCTDVALDPYSDQGHDGIVEDGRILNDETIEQLCKQSVCQARAGSDVVAPSDMMDGRVGAIRDALDSEGFTNVSIMAYTAKYASAFYGPFRDALDSHPGFGDKKTYQQDPANGREALIEAALDASEGADFLMVKPGMPYLDVIRRLRDNTNLPIAAYHVSGEYAMLMAAVERGWMDEKAGIMESLTCFKRAGADIILTYTAKKAAKWMCEDG 433          
BLAST of mRNA_F-serratus_M_contig705.18261.1 vs. uniprot
Match: A0A7S2XYQ0_9STRA (Delta-aminolevulinic acid dehydratase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYQ0_9STRA)

HSP 1 Score: 582 bits (1500), Expect = 7.840e-205
Identity = 279/354 (78.81%), Postives = 316/354 (89.27%), Query Frame = 1
Query:  232 TRAGAAAYNPLDGPNAPLRSNNNGEVWRPQKARPRRNRKSEAMRSMVRENIVRPANFIYPLFIHDKDFEVEIQSMPGCLRHSLPHMLEEVEEAWKFGVRTFVLFPQVPDHLKTNYGEECYNPEGIVPRAVSMIKEKFPDSIVCTDVALDPYSDQGHDGVVKDGQILNDETIMQLTKQVVCQARAGADIVAPSDMMDGRIGAIRDALDAEGFTNVSIMAYTAKYASAFYGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDAEEGADMLMVKPGMPYLDVIRRLKESSNLPIAAYHVSGEYAMMKAAVERGWLDEREAVLEAMTCFKRAGADVILTYYAKDAARWLCEDGF 1293
            T + A  ++P  GP+A L+ NN G VW  Q+ RPRRNRKSEAMRSMVRE IV P+NFIYPLFIH++DF  EI SMPGC RHSLP M++E E AWKFGVR+FVLFP+V D LKTNYGEE YNP GIVPRAVSM+K+  PDSIVCTDVALDPYSDQGHDG+V+DG+ILNDETI QL KQ VCQARAG+D+VAPSDMMDGR+ AIRDALD+EGFTNVSI++YTAKYASA+YGPFRDALDSHPGFGDKKTYQQDPANGREAL+EAALD  EGADMLMVKPGMPYLD+I RLK+++NLPIAAYHVSGEYAM+KAAVERGWLDE++ VLE +TCFKRAGAD++LTYYAK AA+WLCEDGF
Sbjct:   50 TSSDATDFDPTSGPSAALKRNNLGNVWNEQRPRPRRNRKSEAMRSMVRETIVTPSNFIYPLFIHEEDFNQEIASMPGCERHSLPSMIKEAEAAWKFGVRSFVLFPKVDDKLKTNYGEESYNPNGIVPRAVSMLKDALPDSIVCTDVALDPYSDQGHDGIVRDGKILNDETIEQLCKQSVCQARAGSDVVAPSDMMDGRVKAIRDALDSEGFTNVSILSYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALVEAALDVAEGADMLMVKPGMPYLDIIYRLKQATNLPIAAYHVSGEYAMLKAAVERGWLDEKKVVLETLTCFKRAGADIVLTYYAKQAAQWLCEDGF 403          
BLAST of mRNA_F-serratus_M_contig705.18261.1 vs. uniprot
Match: A0A1E7FDX8_9STRA (Delta-aminolevulinic acid dehydratase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FDX8_9STRA)

HSP 1 Score: 562 bits (1448), Expect = 6.720e-197
Identity = 271/346 (78.32%), Postives = 307/346 (88.73%), Query Frame = 1
Query:  253 YNPLDGPNAPLRSNNNGEVWRPQKARPRRNRKSEAMRSMVRENIVRPANFIYPLFIHDKDFEVEIQSMPGCLRHSLPHMLEEVEEAWKFGVRTFVLFPQVPDHLKTNYGEECYNPEGIVPRAVSMIKEKFPDSIVCTDVALDPYSDQGHDGVVKDGQILNDETIMQLTKQVVCQARAGADIVAPSDMMDGRIGAIRDALDAEGFTNVSIMAYTAKYASAFYGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDAEEGADMLMVKPGMPYLDVIRRLKESSNLPIAAYHVSGEYAMMKAAVERGWLDEREAVLEAMTCFKRAGADVILTYYAKDAARWLCEDG 1290
            ++P+ G N  L  NN GEVW  Q+ARPRRNRKS  MR MVRENIV P+NFIYPLFIHD+DF  +I+SMPGC RHSL  ML+EV E++  GV+TFVLFP++PD LKTN G E YNPEGI+PRAV MIKE +PDS+VCTDVALDPYSDQGHDG+V DG+I+NDETI QL KQVVCQARAGADIVAPSDMMDGR+ AIRDALD+EGFTNVSI+AYTAKYASA+YGPFRDALDSHPGFGDKKTYQQDPANGREAL+EAALDA EGADMLMVKPGMPYLDV+RRLK++S LPIAAYHVSGEYAM+KAA ERGWLDE+  V+E +TCFKRAGAD+ILTYYAK AA+W+ +DG
Sbjct:   58 FDPVAGENPALTRNNKGEVWVQQRARPRRNRKSATMRGMVRENIVTPSNFIYPLFIHDEDFNQKIESMPGCERHSLDSMLKEVGESYDLGVKTFVLFPKIPDELKTNMGVEAYNPEGIIPRAVRMIKEAYPDSLVCTDVALDPYSDQGHDGIVVDGKIINDETINQLCKQVVCQARAGADIVAPSDMMDGRVKAIRDALDSEGFTNVSILAYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALIEAALDAAEGADMLMVKPGMPYLDVVRRLKDNSPLPIAAYHVSGEYAMIKAACERGWLDEKAVVMETLTCFKRAGADIILTYYAKQAAQWIKDDG 403          
BLAST of mRNA_F-serratus_M_contig705.18261.1 vs. uniprot
Match: A0A7S3XWB7_HETAK (Delta-aminolevulinic acid dehydratase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWB7_HETAK)

HSP 1 Score: 560 bits (1442), Expect = 1.240e-196
Identity = 264/331 (79.76%), Postives = 304/331 (91.84%), Query Frame = 1
Query:  253 YNPLDGPNAPLRSNNNGEVWRPQKARPRRNRKSEAMRSMVRENIVRPANFIYPLFIHDKDFEVEIQSMPGCLRHSLPHMLEEVEEAWKFGVRTFVLFPQVPDHLKTNYGEECYNPEGIVPRAVSMIKEKFPDSIVCTDVALDPYSDQGHDGVVKDGQILNDETIMQLTKQVVCQARAGADIVAPSDMMDGRIGAIRDALDAEGFTNVSIMAYTAKYASAFYGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDAEEGADMLMVKPGMPYLDVIRRLKESSNLPIAAYHVSGEYAMMKAAVERGWLDEREAVLEAMTCFKRAGADVIL 1245
            ++P+DGPNA L+ NNNG+VW PQ+ RPRRNRKS A+R MVRE IV P NFIYPLFIHD+D+E +I SMPGC RHSLPHM+EE +EAW +GVR+F+LFP+VPD LKTN  +ECYNPEGIVPRAV M+KE  PD+ VCTDVALDPYSDQGHDGVV+DG+I+ND TI QL KQV+CQARAGAD+VAPSDMMDGR+GAIRDALD+EGFT+VSI+AYTAKYASA+YGPFRDALDSHPGFGDKKTYQQDPANG EAL+EAALDA+EGADMLMVKPGMPYLDVIRRLK++S+LPIAAYHVSGEYAM+KAAVE+GWLDE++ VLE +TCFKRAGAD+IL
Sbjct:   34 FDPVDGPNAGLKRNNNGDVWVPQRIRPRRNRKSAAVRDMVRECIVTPRNFIYPLFIHDEDYEQDIPSMPGCQRHSLPHMIEECKEAWSYGVRSFILFPKVPDELKTNMADECYNPEGIVPRAVRMLKEALPDATVCTDVALDPYSDQGHDGVVEDGKIMNDITIQQLCKQVICQARAGADVVAPSDMMDGRVGAIRDALDSEGFTDVSILAYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGEEALIEAALDAQEGADMLMVKPGMPYLDVIRRLKDNSHLPIAAYHVSGEYAMLKAAVEKGWLDEKKVVLETLTCFKRAGADIIL 364          
BLAST of mRNA_F-serratus_M_contig705.18261.1 vs. uniprot
Match: A0A7S3PWI1_9STRA (Delta-aminolevulinic acid dehydratase n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PWI1_9STRA)

HSP 1 Score: 561 bits (1445), Expect = 2.060e-196
Identity = 272/346 (78.61%), Postives = 309/346 (89.31%), Query Frame = 1
Query:  253 YNPLDGPNAPLRSNNNGEVWRPQKARPRRNRKSEAMRSMVRENIVRPANFIYPLFIHDKDFEVEIQSMPGCLRHSLPHMLEEVEEAWKFGVRTFVLFPQVPDHLKTNYGEECYNPEGIVPRAVSMIKEKFPDSIVCTDVALDPYSDQGHDGVVKDGQILNDETIMQLTKQVVCQARAGADIVAPSDMMDGRIGAIRDALDAEGFTNVSIMAYTAKYASAFYGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDAEEGADMLMVKPGMPYLDVIRRLKESSNLPIAAYHVSGEYAMMKAAVERGWLDEREAVLEAMTCFKRAGADVILTYYAKDAARWLCEDG 1290
            ++PL G    L  NNN EVW PQ+ RPRRNRKS A+R+MVRENIV P+NFIYPLFIHD+DF   I+SMPGC RHSLP ML EV +A+K+GV++FVLFP+VPD LKTN G E YNPEGIV RA+ MIKEK+P+S+VCTDVALDPYSDQGHDGVV++G+ILND TI QL KQ V QARAGADIVAPSDMMDGR+GAIRDALD+EGFT+VSI+AYTAKYASA+YGPFRDALDSHPGFGDKKTYQQDPANGREAL+EAALDA EGADMLMVKPGMPYLDVIRRLK++S+LPIAAYHVSGEYAM+KAA ERGWL+E++ VLE +TCFKRAGAD+ILTYYAK AA W+ EDG
Sbjct:   61 FDPLSGAQPALIRNNNDEVWVPQRVRPRRNRKSAAIRNMVRENIVTPSNFIYPLFIHDEDFNQSIESMPGCERHSLPSMLAEVGDAYKYGVKSFVLFPKVPDELKTNLGVEAYNPEGIVHRAIRMIKEKYPESVVCTDVALDPYSDQGHDGVVENGKILNDVTINQLCKQAVSQARAGADIVAPSDMMDGRVGAIRDALDSEGFTDVSILAYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALVEAALDASEGADMLMVKPGMPYLDVIRRLKDNSDLPIAAYHVSGEYAMIKAACERGWLEEKDIVLETLTCFKRAGADIILTYYAKQAAMWMAEDG 406          
BLAST of mRNA_F-serratus_M_contig705.18261.1 vs. uniprot
Match: A0A7S2G7P7_9STRA (Delta-aminolevulinic acid dehydratase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G7P7_9STRA)

HSP 1 Score: 556 bits (1432), Expect = 1.810e-194
Identity = 269/377 (71.35%), Postives = 320/377 (84.88%), Query Frame = 1
Query:  163 CAPAG-VVTSMVAAPNSISAGATETRAGAAAYNPLDGPNAPLRSNNNGEVWRPQKARPRRNRKSEAMRSMVRENIVRPANFIYPLFIHDKDFEVEIQSMPGCLRHSLPHMLEEVEEAWKFGVRTFVLFPQVPDHLKTNYGEECYNPEGIVPRAVSMIKEKFPDSIVCTDVALDPYSDQGHDGVVKDGQILNDETIMQLTKQVVCQARAGADIVAPSDMMDGRIGAIRDALDAEGFTNVSIMAYTAKYASAFYGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDAEEGADMLMVKPGMPYLDVIRRLKESSNLPIAAYHVSGEYAMMKAAVERGWLDEREAVLEAMTCFKRAGADVILTYYAKDAARWLCEDG 1290
            C P+  ++T    AP S   G+  +    + Y+P +G   P+  NN  ++W PQ++RPRRNRKS A+R+MVREN V P +FIYPLFIH++ +E EI SMPGCLRHSL HML E+ EAW++GVR FV+FP+VPD LK+N  +ECYNP GIVPRAV+MIK+KFP++IV TDVALDPYSDQGHDG+VKDG+ILNDETI QL KQ VCQARAG+DI+APSDMMDGR+ AIRDALD+EGFT+VSI+AYTAKYASAFYGPFRDALDSHPGFGDKKTYQQDPANGREAL+EA LD  EGADMLMVKPGMPYLDVIRRL++++ LPIAAYHVSGEYAM+KAA ERGWLDE+ A LE++ CF+RAG+D+ILTYYAK AA+WL EDG
Sbjct:   27 CVPSSALITPKALAPVSHRQGSVPSLVMQSVYDPTEGSEPPMTYNNQEKLWLPQRSRPRRNRKSAAIRAMVRENFVAPCHFIYPLFIHEESYETEIPSMPGCLRHSLDHMLVEIAEAWEYGVRAFVIFPKVPDDLKSNEADECYNPNGIVPRAVAMIKDKFPEAIVTTDVALDPYSDQGHDGIVKDGKILNDETIGQLCKQAVCQARAGSDIIAPSDMMDGRVMAIRDALDSEGFTDVSILAYTAKYASAFYGPFRDALDSHPGFGDKKTYQQDPANGREALIEADLDVAEGADMLMVKPGMPYLDVIRRLRDTTELPIAAYHVSGEYAMLKAAAERGWLDEKAACLESLLCFRRAGSDIILTYYAKQAAKWLSEDG 403          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig705.18261.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q9ARD9_FUCVE1.470e-30398.12Delta-aminolevulinic acid dehydratase n=1 Tax=Fucu... [more]
D8LEC7_ECTSI5.990e-23580.58Delta-aminolevulinic acid dehydratase n=2 Tax=Ecto... [more]
Q9ARD2_9PHAE1.290e-22687.04Delta-aminolevulinic acid dehydratase n=1 Tax=Lami... [more]
A0A836CM03_9STRA1.270e-21383.57Delta-aminolevulinic acid dehydratase n=1 Tax=Trib... [more]
A0A7S1UCC0_9STRA1.700e-20981.50Delta-aminolevulinic acid dehydratase n=1 Tax=Phae... [more]
A0A7S2XYQ0_9STRA7.840e-20578.81Delta-aminolevulinic acid dehydratase n=1 Tax=Fibr... [more]
A0A1E7FDX8_9STRA6.720e-19778.32Delta-aminolevulinic acid dehydratase n=1 Tax=Frag... [more]
A0A7S3XWB7_HETAK1.240e-19679.76Delta-aminolevulinic acid dehydratase (Fragment) n... [more]
A0A7S3PWI1_9STRA2.060e-19678.61Delta-aminolevulinic acid dehydratase n=2 Tax=Chae... [more]
A0A7S2G7P7_9STRA1.810e-19471.35Delta-aminolevulinic acid dehydratase n=1 Tax=Dict... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig705contigF-serratus_M_contig705:332002..341955 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score662.9
Seed ortholog evalue9.9e-188
Seed eggNOG ortholog2880.D8LEC7
Preferred nameALAD
KEGG rclassRC00918,RC01781
KEGG koko:K01698,ko:K09490,ko:K09499
KEGG TC1.A.33
KEGG ReactionR00036
KEGG Pathwayko00860,ko01100,ko01110,ko01120,ko03060,ko04141,ko04918,ko05020,map00860,map01100,map01110,map01120,map03060,map04141,map04918,map05020
KEGG ModuleM00121
Hectar predicted targeting categorychloroplast
GOsGO:0001101,GO:0001666,GO:0001775,GO:0002237,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0006810,GO:0006887,GO:0006950,GO:0006955,GO:0006979,GO:0007584,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009314,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009635,GO:0009636,GO:0009719,GO:0009725,GO:0009892,GO:0009894,GO:0009895,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010039,GO:0010043,GO:0010044,GO:0010212,GO:0010243,GO:0010266,GO:0010269,GO:0010288,GO:0010605,GO:0012505,GO:0014070,GO:0014823,GO:0016043,GO:0016192,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019222,GO:0019438,GO:0022607,GO:0030141,GO:0030162,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0031410,GO:0031667,GO:0031960,GO:0031974,GO:0031982,GO:0031983,GO:0032025,GO:0032268,GO:0032269,GO:0032496,GO:0032940,GO:0033013,GO:0033014,GO:0033197,GO:0033273,GO:0033993,GO:0034097,GO:0034641,GO:0034774,GO:0036230,GO:0036293,GO:0042119,GO:0042168,GO:0042176,GO:0042177,GO:0042221,GO:0042440,GO:0042493,GO:0042802,GO:0043167,GO:0043169,GO:0043200,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044421,GO:0044422,GO:0044424,GO:0044433,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045055,GO:0045321,GO:0045471,GO:0045861,GO:0046148,GO:0046483,GO:0046677,GO:0046685,GO:0046686,GO:0046689,GO:0046872,GO:0046903,GO:0046914,GO:0048519,GO:0048523,GO:0048545,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051246,GO:0051248,GO:0051259,GO:0051260,GO:0051384,GO:0051597,GO:0051704,GO:0051707,GO:0051716,GO:0060205,GO:0060255,GO:0061136,GO:0065003,GO:0065007,GO:0070013,GO:0070482,GO:0070541,GO:0070542,GO:0070670,GO:0070887,GO:0071241,GO:0071248,GO:0071284,GO:0071310,GO:0071345,GO:0071353,GO:0071704,GO:0071840,GO:0080090,GO:0097305,GO:0097708,GO:0099503,GO:0101002,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901698,GO:1901700,GO:1901799,GO:1903050,GO:1903051,GO:1903362,GO:1903363,GO:1904813,GO:1904854
EggNOG free text desc.porphobilinogen synthase activity
EggNOG OGsCOG0113@1,KOG2794@2759
Ec32 ortholog descriptionporphobilinogen synthase, putative chloroplast precursor
Ec32 orthologEc-00_001750.1
EC4.2.1.24
COG Functional cat.H
BiGG ReactioniRC1080.CRv4_Au5_s2_g8620_t1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03110,ko04131,ko04147
Exons9
Model size1473
Cds size1278
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932170.5803783-UTR-F-serratus_M_contig705:332001..3321751622932170.5803783-UTR-F-serratus_M_contig705:332001..332175Fucus serratus maleUTRF-serratus_M_contig705 332002..332175 -
1690964181.5176501-UTR-F-serratus_M_contig705:332001..3321751690964181.5176501-UTR-F-serratus_M_contig705:332001..332175Fucus serratus maleUTRF-serratus_M_contig705 332002..332175 -
1622932170.8207428-UTR-F-serratus_M_contig705:341934..3419551622932170.8207428-UTR-F-serratus_M_contig705:341934..341955Fucus serratus maleUTRF-serratus_M_contig705 341935..341955 -
1690964181.6416774-UTR-F-serratus_M_contig705:341934..3419551690964181.6416774-UTR-F-serratus_M_contig705:341934..341955Fucus serratus maleUTRF-serratus_M_contig705 341935..341955 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932170.6062791-CDS-F-serratus_M_contig705:332175..3322711622932170.6062791-CDS-F-serratus_M_contig705:332175..332271Fucus serratus maleCDSF-serratus_M_contig705 332176..332271 -
1690964181.5369134-CDS-F-serratus_M_contig705:332175..3322711690964181.5369134-CDS-F-serratus_M_contig705:332175..332271Fucus serratus maleCDSF-serratus_M_contig705 332176..332271 -
1622932170.6403337-CDS-F-serratus_M_contig705:332814..3329671622932170.6403337-CDS-F-serratus_M_contig705:332814..332967Fucus serratus maleCDSF-serratus_M_contig705 332815..332967 -
1690964181.5512488-CDS-F-serratus_M_contig705:332814..3329671690964181.5512488-CDS-F-serratus_M_contig705:332814..332967Fucus serratus maleCDSF-serratus_M_contig705 332815..332967 -
1622932170.662044-CDS-F-serratus_M_contig705:333970..3341381622932170.662044-CDS-F-serratus_M_contig705:333970..334138Fucus serratus maleCDSF-serratus_M_contig705 333971..334138 -
1690964181.5647275-CDS-F-serratus_M_contig705:333970..3341381690964181.5647275-CDS-F-serratus_M_contig705:333970..334138Fucus serratus maleCDSF-serratus_M_contig705 333971..334138 -
1622932170.685341-CDS-F-serratus_M_contig705:334487..3346071622932170.685341-CDS-F-serratus_M_contig705:334487..334607Fucus serratus maleCDSF-serratus_M_contig705 334488..334607 -
1690964181.5752974-CDS-F-serratus_M_contig705:334487..3346071690964181.5752974-CDS-F-serratus_M_contig705:334487..334607Fucus serratus maleCDSF-serratus_M_contig705 334488..334607 -
1622932170.7097251-CDS-F-serratus_M_contig705:338207..3384201622932170.7097251-CDS-F-serratus_M_contig705:338207..338420Fucus serratus maleCDSF-serratus_M_contig705 338208..338420 -
1690964181.585567-CDS-F-serratus_M_contig705:338207..3384201690964181.585567-CDS-F-serratus_M_contig705:338207..338420Fucus serratus maleCDSF-serratus_M_contig705 338208..338420 -
1622932170.730667-CDS-F-serratus_M_contig705:338802..3389221622932170.730667-CDS-F-serratus_M_contig705:338802..338922Fucus serratus maleCDSF-serratus_M_contig705 338803..338922 -
1690964181.598765-CDS-F-serratus_M_contig705:338802..3389221690964181.598765-CDS-F-serratus_M_contig705:338802..338922Fucus serratus maleCDSF-serratus_M_contig705 338803..338922 -
1622932170.7595024-CDS-F-serratus_M_contig705:339368..3394911622932170.7595024-CDS-F-serratus_M_contig705:339368..339491Fucus serratus maleCDSF-serratus_M_contig705 339369..339491 -
1690964181.6086607-CDS-F-serratus_M_contig705:339368..3394911690964181.6086607-CDS-F-serratus_M_contig705:339368..339491Fucus serratus maleCDSF-serratus_M_contig705 339369..339491 -
1622932170.7804718-CDS-F-serratus_M_contig705:339994..3402241622932170.7804718-CDS-F-serratus_M_contig705:339994..340224Fucus serratus maleCDSF-serratus_M_contig705 339995..340224 -
1690964181.62086-CDS-F-serratus_M_contig705:339994..3402241690964181.62086-CDS-F-serratus_M_contig705:339994..340224Fucus serratus maleCDSF-serratus_M_contig705 339995..340224 -
1622932170.8047595-CDS-F-serratus_M_contig705:341879..3419341622932170.8047595-CDS-F-serratus_M_contig705:341879..341934Fucus serratus maleCDSF-serratus_M_contig705 341880..341934 -
1690964181.6317492-CDS-F-serratus_M_contig705:341879..3419341690964181.6317492-CDS-F-serratus_M_contig705:341879..341934Fucus serratus maleCDSF-serratus_M_contig705 341880..341934 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig705.18261.1prot_F-serratus_M_contig705.18261.1Fucus serratus malepolypeptideF-serratus_M_contig705 332176..341934 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig705.18261.1

>prot_F-serratus_M_contig705.18261.1 ID=prot_F-serratus_M_contig705.18261.1|Name=mRNA_F-serratus_M_contig705.18261.1|organism=Fucus serratus male|type=polypeptide|length=426bp
MKTVPMAPSLFGVLILVTVCEAFVAPRPPLAGLAPSSFASGVGITPTCAP
AGVVTSMVAAPNSISAGATETRAGAAAYNPLDGPNAPLRSNNNGEVWRPQ
KARPRRNRKSEAMRSMVRENIVRPANFIYPLFIHDKDFEVEIQSMPGCLR
HSLPHMLEEVEEAWKFGVRTFVLFPQVPDHLKTNYGEECYNPEGIVPRAV
SMIKEKFPDSIVCTDVALDPYSDQGHDGVVKDGQILNDETIMQLTKQVVC
QARAGADIVAPSDMMDGRIGAIRDALDAEGFTNVSIMAYTAKYASAFYGP
FRDALDSHPGFGDKKTYQQDPANGREALLEAALDAEEGADMLMVKPGMPY
LDVIRRLKESSNLPIAAYHVSGEYAMMKAAVERGWLDEREAVLEAMTCFK
RAGADVILTYYAKDAARWLCEDGFP*
back to top

mRNA from alignment at F-serratus_M_contig705:332002..341955-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig705.18261.1 ID=mRNA_F-serratus_M_contig705.18261.1|Name=mRNA_F-serratus_M_contig705.18261.1|organism=Fucus serratus male|type=mRNA|length=9954bp|location=Sequence derived from alignment at F-serratus_M_contig705:332002..341955- (Fucus serratus male)
CTGTATCAGTAGTTACCCAAGATGAAGACTGTGCCAATGGCGCCATCCTT GTTTGGGGTGCTGATCCTTGTGACGGGTAAGGCAATAAACAAGCGAGTGT CTGTGCGGTAAGCGCATGTCTAGCTGAGCGTGACAGACATGGGTACAAAT TTTGCTCCATCCTCGCGTTGACACGTATTTGGGGAAGGCTACGAGTGGCA CTTAGAGGAAAACAACACCCGTGCGCCTGCGGTTTCCAGGATGCCCGCGC TACTGTAGTATGATAGTCTTGGCATGTTTGTGCTTTTTCTTCTTCGCAGG CTTGCCCGAGAAATCGCGGGTTCGCGTGCCCCTATCTATCTACGAGAGTG CAGCATGCAGTGCCTTCAGGCGTTAAAAGTCCGCAGAGCAGGCAGCTCCG GCGCATACTCTTTGACGAGTACAGTAAAGCAAGTTTTGAAAGACCAACTA TCTCGACATCCCCAGCAAAGAGAGCAGTCTCACGGCTGTGATTTTCCTCA TTACACCGTTGCCACTCAATCCTTGCAGCTCACGTACGGTTTCTTGGCCC ATCCTCCTGAAATTTAGGCTCTAGCTTTGCTGTTCGCCCGCCCAACTAAC ATGAACATGTTTTCAATATCATATGGAGCGATACGAATCGGCTGTTTGTA CTCGTACGGTAACGGAAACTTTTGATACAGTTACGGTAACGATGTGTACA TACTGTTATTAACACAAGCTTTACGATCAACGAGTTGCGAACAGAAATAC GCCCATATATATCTCTCCACGGAATGGCATCTGTTCTTTTGCATGTTCCG GTTTTTTCTCCGAGCACGAGAAAGTCAAATTGACGTGGTGCCTCATCGGG ACTAACGCTTATAATCCGTGGGAATCGGCTATAGCTTTTAAGGGAGAAAA CAACGAAGCACCCGCATGCACAAACAGTACTTCGAAATTTTCGGAGGGGG GGGGGTTACGCGGATGGGTGTAGGCTCTAGAAGACTTTTGCACCGACTGT AATGCGACTCTGGCTCACGACACGTGTACACGAAGACGCCAGCACTCAAA ACATTCGAAACAGTAGAGTAGGACACCCATCATGACGTGTTTCAGGCGCA AGCCACATCGGAACTGAGAGAGATAAGATTGCGTCTTTATGTCGGTCCGG TCATTGTTTTTGTCTAATAACACTGTAGAGCTACAGTTCAAGTAGTTCGT ACAAAGGCGGGTAAGTCTCTGGCTCAGAGCTTGCAACCTGCGTAGCTCCC ACCGGCATCGACGGCGTGCCGTCTAACGATCACTGTATGGTGCCGCGGCA TCCCCCGTGATACTGCATACTGTTATGATGAGAGACTTAGAGCTTCGATA GTTAGGATACGACGACAGTCCCGTGGAAACATTTCGGAGGGATTGGTACG GCCCTTTAGAATCCACTAATCGTGAGTTCCTTCGTGCAGATCGTTTCGAG TCCTCATCAAAATACTGTAGCGATGGAATGGTACAGGTGACTCCGATCCG CACGTTTTTTGGTACAGTAGTTTTAACAAGTGTATACAACTACCGTGAAA ACCATTCTCGCCCCCATGACCACGACATCCTGACTGCAGTACTTTAACGT GCACACCCTGTTTCGGCGGCACCCGTTTTGCCGCCGAAGCGATTTCTGTG GAACTACTACATCGCCTTGTCGAGTAACATGCAACCCGTTTGCATTCTCG GCCACGGGCGCCCTTCCGCTTTTTTTGCCAGTCTGTGAGGCGTTCGTGGC ACCGAGGCCGCCGCTCGCCGGGCTGGCCCCCTCCTCGTTCGCCAGCGGCG TCGGCATCACCCCAACCTGCGCACCCGCTGGGGTCGTGACCAGCATGGTG GCGGCGCCCAACAGTATCTCGGCCGGAGCGACGGAGACGCGGGCGGGAGC GGCGGCGTACAACCCGTTGGATGGACCCAACGCTCCCCTCCGCTCTAACA ACAACGGAGAGGTAATTGTTGCTTGGCTTGACACATGCTTTCGGTTCGAG GGACTGAACGGGAAGAGCAAAGCGGTCCGGCCAAACTCGATATTTTTTCC CACCCGACCCCTCTTCTCGGTTTCTCAAAGGCTGATTCCTCTCCCTCGAT AAGACCGTCGGAGACGATGTCCTTTCGGGATAGACTTCACTTGCCCGACC TTTTTGGTTGCCGATCCATTTCACTCCTGCGGGATTATGGAAGGGAGAGT GACAGCACATTATTTCGCAAGTCGCAGCGTTCGCTGCAGTGACGGAAAAG CCACGCGACCTACTCCCGTGTGGGCAGCGCTAGATTCATATTTTTACCCG ACGCAAGAAACACTGAATTCATGCTCTGTGGGGGGGGGGGGACACAGCGG CAGCGCGTGACGCGCCGCCCTATTCTCGCCTTGAGCTCGTCATGCTTTCC AACTCTTCTCCGAGAGCGGCCATGGAGCAAATCCTTTTTCGGCTGGCGCG ACGTTGCGACGCAGGTGTGGCGTCCTCAGAAAGCGCGGCCGAGGCGTAAT CGCAAGAGTGAGGCGATGCGCTCCATGGTTCGCGAGAACATCGTAAGACC TGCTAACTTCATTTACCCTCTCTTCATCCACGACAAGGTGCGGCTCGACT TCGCCTCCACCGCGTGTAAGCCATTTTCTAGACTTTTCGTGCCGCTTTGG CCGTTGCTGTAACCGTTGTTTTTTTAATCCCGCCTAGGTTTGGAGGCTCG CCGCGCTCGTATCAAATTTGCCTTTTTGTTTGTTTGTGATGCTATTGTTG CTTTTGCTGATCATGGTCGATTTATGCGCAATAATCAGAACCGTCCTGCA CACTTGAGTGTTTTGTTTGTGCTAAGATCTACGAATCATGACGCCGGGGT GGAACATTTTCGCGCTTTGCAAACCTCCGTGGAGTGGCCGATTCTACCCT TGACCTGAACGTGGGCCTTAGGGATGCTGCGTTGTGTTGCATGTCAAGGG GTTCTCCTTTAAAACGCGTTTATGACATGAGTTTTCATGAAGTGGTATTC CGTGTCGATCATCCACAATATTCCGCGTGACAGGATTTTGAGGTGGAGAT TCAGTCGATGCCCGGCTGTCTCCGGCATAGCCTCCCGCACATGCTCGAGG AAGTTGAGGAGGCTTGGAAGTTCGGAGTGCGCACCTTCGTCCTCTTCCCT CAGGTCGGCGGCGCACCAAAACATGCCCTTTTTCTGTTGTGTTGCCAGCC ATCACCACGCACGGCGAAACTGAATTTGAGGCCATTTCAGTAGATAAAAT CGTCTAGAAACGCCCAGGGCAGCGCTAATATACAGTATCATGGTATTTTA GGAACTGGTGTGAGTGCCGGCACACACCACACCCGTGAAGAGAGCGCAGC CTGGACAGGTACCGACAACGACAAAGTCCTTTGTGTACAAGTGTTTTGCC GCGGCTCGGATGGTGCCCAGGCCCCCCCAAAAATATTTCCAGTATCGCGC CCCGATGAGGCGTGAACGTTCTCGAAAATCAGACTCCCATAGATGTCGTT TCTTCTTCCCCCCTTCGCCCTCCGAACCGGCCTAGGTGCCCGACCACCTC AAGACCAATTATGGGGAGGAATGCTACAATCCCGAAGGCATCGTACCGCG AGCCGTGAGCATGATCAAGGAGAAGTTCCCGGACAGCATCGTGTGCACCG ACGTGGCTCTGGATCCTTACAGCGACCAGGGCCACGACGGTGTGGTCAAG GACGGCCAAATTCTCAACGACGAGACTATCATGCAGCTCACCAAGCAGGT GACAATGTTTTTCTATATCGGTATTCGATAGCTCGAAGGGGTTGTGGGGA TTTTAAGTACGATCGCGTGTAGAAGATTCACTGCTACGACCGTCTTGTTG GAGCGTCGGGGGGGGGGGGGGGGGGGGGGGGTGGTGGTGGTGCCAGACTT TCGAGTAAGAGGTGATTCCAGGCGAATGGGAACATGAGCCGTTGTGCCCT CTTTTGGCGTGAGCAAGGTCTTGCTTGTATATATGTATGTATGTATGTAT GTGTGGTGATGGTGACTGAAGCAAACAAGGTGAATCCGTTGGGCCTGTGT TGGTCTCATAATGGGATCGCCAGAGTTCCTCCCGACGGTCACCGTGTCAC ATCCGTCTACAGGACAGTTCACACACACCAGTATACAATTTATTGCGTAC ATGTGTGCGTGGTGGTTGACTCAGTGGGATGCTGAGGGCCGCTGTGCTTG CTCTTCTATTTGGAGCATCGGTGTCCCGTCAGGGCAATCGATGAACAAGG TATTCATAGCACTATTAATAGTACTAATAGTAGTATTATTATTAATAGTA TAATAGTTTATCTTCTGTTAACGTTTTCAGGGACGCCCTGTTCTCCCGTT TGTAGCGATATGGCGTTCAGCACGCACCTCCGATACTTTCTGTATCACAC ATGTCCACTGTAATGTACTAATAGTAGTATTATAGATGTGGGAAAATCGA GGCGCACAAACATTGGTCATAGTCCATGGTGATACCTGGAAAGGTAGCAC CCGTTACTGGAACTGCCCCGAGGACTGCTGGCCTTTTGCCGGGCGACTCT ATCATAGGCAGTGAACGCTATCGGTACGCTATTGCGTGACCTGATGCATT CGGGACCGACCCGATGGCGGTTGGCGATATAATCATTATAATGGACGCTG TCGCGGAAAGAGGGAGGCATCCCATGAGTAAATACCAGATTCATCTACCT AATTGTGGAGAATCAGCGGGCTTACGCGAGACGGAACGGCCGAACCCGTC TCGCAAGACCAAATTCTCAGGCGCGAACGAGGACGGGCAAAAAAGAAGAT TGTCCCCTGTTCAGCTGACCACGAGAAGGATTGACAACCAACCTTACCCG GTTGATATATACCCTGCTGAAAGTGCTGACCATACGGGCTATATAATATA TAACTTGGTTATTGACCGGAGCGGAAACAAAATCCTGGATGACTTCACGT GTGGCGCAGGATCGTTTTGAGGGGCTAACTCGAGCGGAAAAAATACGACT TTTCCCGCCCGTATCTTGTTTTTGATTGGGGCGAAAGCGAGGACGAGCAG TTTCCCGAGCGCAGGAGAGATACGGCCGGGTTCGACTCTGGGGGTGGTCC TTGGCTGGCTGAAGGAGGAATTGCAAGTACTTTACGTCTGGGGCCAGGGC GGTAACGTGACCGCATAAGCCCAGTAATCGTCGCGCGAGGACCCTCGGAA GCTTGGGGAGGGAGGGGGCTCTGTCGGGAGTGCGAGATTAAGTAAGGCCT TACCTCGATTATGTTGCCCCGCGAGCTCTCGGTAGTTCGTGCACGAGAGA CTTCTCTCGGCCGTGCTTCGGAGATGCCAAGAGGCGAGGAAAGCGTAGAC TGACGTCCCCCAAGGAGATTCGCGCGATGTTGCGTGCGATGTCGCTCGAA GACCCGACAAGGAGAGAAAGGTTGACGACTCGGGGCGGCGAGAAGAAACA GTCGTGCTTAGATGGAGGGTGCGAGTCCCAACTGCGGAGAGCGGCGGGTG CGTGGAAGCCGACCGCCCGGAACTTGTTCGAGTCCACGGCGTAGGCGTGG GCGTGGGCTCGGGCGCGTCCGGAGGGGTGCGCAAAAGCGGGGATGATGCC GGCTTTCGACGGCGGCAGCGGCAGGGCCCTGCGAGCCTTAGGCGCGAGAA CACGTGCCAAGGGTAAACGTCGGTCGGGACAATAACCTGCAGCTTCGAGA CAATTCCCACTAACCCTGCTTGAGTACTTGGTCCGTGTGAGGTCGAAAAA TTTGGAACTGTGTCAGCGCTGCCGTTCTGTCTTTTTTAGATTGAGCTGGA CTGCACGCGTGATTTTTCACGGTGGTGCTTGGGCACGTGCCGGGGATGCC GGGAAGGACGTCTCTCCGAACGAGTTGAGACTTCGAAACGCGGATGTCGT TTATTCGATTTCGAGCGCCTTTCGGTCTCTTTTTTCTTGTCTTGGGGGAC AAAGTCCAAGGCAAAGGACGCGAAAGACGCACAAGAGTGTACCCCGGGTC GTTTTCTGATCGAAGGGAAGGTGCAGCTGTCGCGTTGATCGGTCTTGAAA AGACGAGAACCCCACGCGCGTTGGACCCTGTCTCGAACATTCAAGTGCCG ATGAGACTCAAGTGTTGGGCGCCGGAGCTCAAGAATCTGCATGTAAACAT GTAAACAAGCGGAGCGGCGGTGAAAGCTGAAAGCGACAGCTTGGCGTCGA CCTTTGGAAGTATTCGATCTTGCGCGAGCTCTCCAGCTACGGGTCATATT GCTTTATGGAGCCTTTCCTTTCCTTTCCTTTCAAGCCGTAGCTCCATTTT CTTTTTTTGGGGGGGAGGGGGTCGTATTTCTTGATAACTTAACTCTGCAG ACACGAGAACCTCGCGAACGCATGGAGAAGTTTAAGTGGGTACAGTTATT GTTGCCATCAAAAACGCCATACTTTACATGCGGGGGGACGTTACGCGTAC GTGCTGCGTGTGCAAATGAGATCTTGCGGTACCGCAAAAATTGAAAGTCG CAAACTGAAAAAAAGTTGTGTTTTGCTTGTTTTCGTCGGGCTGCCAGTTG CGCACACGCTCGTGTAGTAAAAAAGTCCTGCTGTAGGATAGGGTTGCTAA AGCGTTTATGCCCAGGGGTGTCGGTTCTTCTGGTCCGCTGTAGTTGCTGA AATGTTGCCTCGCGGGAGCATCCATCCGACGCTGTCGAGTGATTATCAGG CCGCACGCGTGCAAGCGTGAGGCGCAGGGGTACTGTACTATCTGGTGCGA TCGAGGCCCTGCTCGCATGAAGGAGCACACGGGGTTATTTGTTGCCCCTG AGGGGTTCACCGAGAGAGGGGAAGGGAGAGGGAGGAGGGGAGGAGGGAAT TCGCCGCAGGGGAGGTTCCGCGGAGTGCCACCCAGGCGAAACTCGAGTCA CGACGGGCTATGATATACAGTATCTGGGTGGGATCGTTTTGAGCGGCGAG GTGGCCAGAGAGCGAACAAGCAGGAACGCGCGGTTGCTTTCCTCACTCAT GAATTAATTGCCCGAACAGTTTCCCCGTTTTGTTCGTTGTTAAGCCTTGT CTTGTACCTATATTCTCACGTCAACGTCGTGTTATGTTCCCCATAGTATC TTAATATCTTAATCGTCTACGGGGGGGGGGGGAGTCGGGGTCGCTTGCTT TCCTCGTCTCTTGCCGTTCATTGGCGTTGATGGCACACACTGTGAGAGTA ATAGGTAAGACGGAAATCGCATCTTGGTCCGCTGGCTATCGTGTTTGCCT TTTTTTTTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTCAACGCG CGTCCGGTTGCTCGCGTGCCGGCTGCGGCTGCTGCTGCTGCTTGCCAGGT GGTGTGCCAAGCTCGCGCTGGCGCTGACATTGTAGCGCCATCAGATATGA TGGACGGGCGGATCGGAGCGATCCGGGACGCCCTCGACGCGGAAGGTTTC ACGAACGTCTCCATCATGGTGAGAACTCAAGGGCGACACGACCGGGGGGG GGGGGTTCGTGCACGTAGCCTGCTCGACGGGTGTACCCTTGCATGAAATA TCCGCACCTTTAAGTTACACCTCAAGGCTTATTTCCGGTCATTTTGCCGA CGGCCAAGTCTACAATGGTCGTGTTCGGCCAGGCCGGGGCCTCTGCCCGG GGCCTCTGCCGTCTGCGGTTTCGAAAACAACAGGGTCTGCGGTTTTCCCT TGGTGATGAGACCGATGTACAGTACATCAATAGTGCAAGGTGCTCCACCT TTGTTCCGCCCTTGAATTTTATTGAACTCGACTCCACTACCGCCTCCGCC CCCCCCCCCCCTACAAGGCGTACACGGCCAAGTACGCGTCGGCTTTCTAC GGACCATTCCGCGATGCCCTGGACTCACACCCCGGATTCGGCGACAAGAA GACGTATCAGCAGGATCCCGCGAACGGTAGGGAGGCGCTGCTCGAGGCTG CTCTAGATGCCGAGGAGGGAGCGGACATGCTAATGGTGAGTGTGCGGGGA TACCTTTAAGATAGCGCGGTCTACCACAGTAATCTGTACTCAAGGAGTTG GATGTCGTGATATCTCTAGACCGCTCCTGCCCGTCTCTCTCTCCACCGAT CGACTGCCCGGATGTTTTTTTCTTCTTTCTGGATGCGCGTGTTGTAAGTG ATAGGTCGCCAATTTTGGGTTATTTTAGCTAGCACCCTCAACCTTTGCAA TCTAGCAGACCCGGTGGGTCTTACAAGCTACCAGGTATTTTTTAAACCAA ATTGTCGGACCCGATGAAATCGGAGCTGGCTCGATGACGGTTGGCGGTAT ATGTGGACGCCGTCGTGGAAAGCGGCAGGAATCCCGATTCAGCCTGAGTA TAGAGAGAGTGGGCGGGCTAATGCGAGACGGGACGGTCGGACCTATCTCG CGAGACCAAATTCTCAGGCGCGAACGGGGACACGGAAAAGGTTATATTTC GTGTTCAGCTGACCACAAGCAGGATTGGCAACCTCACCCGGTTGATCTGA TCATGGATACTTTGCTGAAAGTGATGACTACGGCATAGAAAAGTGCCCTT GGCATAAAAAGAGCTACAAAAGCCCCTCCTAAAAAAACAAAATAACTTTG CCTCAACGGAGGCTAGTGGAGGGGGGGGGAGTAAGGTGTCTAGTCCATGA TCAAAGTACGTCTTGAGCTTTCCTTATGTGTGGATCAAATAATGCCTTAC GATATGTACGTACAGCAGTATCCAGGCTGTCTGTTGTGCCAACGTTCGCA AAACAAGAATCTCTTGTTCTGCCGAGGATTCACTTTCCGTTCCAATCGCC AGCCCGGGAGGTTTGGCTCTCCGGGCAGTGGTGCCCTTCTATTTCATAGG CTGATTTTAGACTTGCGCGGACATGACTCACTAAGGCGCTCTAGAGTATA TGCCCCTCACCATTATAATAGACCCTATAAATATTTATAATATACTCTTG GACGTTTTTTTCTTCTTTTTATTTTCCCCCGTGCAAAGGTGAAGCCCGGC ATGCCGTATCTCGACGTTATCCGGCGACTCAAAGAGAGCTCCAATCTTCC CATCGCCGCGTACCACGTGTCGGGGGAGTACGCAATGATGAAGGCGGCGG TGGAGCGGGGATGGCTCGATGAGAGGGAGGCGGTGCTAGAGGTGCGTGCC GCGCCATTAACATGCATTAATTTATCCCCCCCCCTTTCCCCTGATCAGTT TCGTTTTCATTTTCCTTTCCAAGTCGTTATTTTTGCTACACGTGACGCAC TGGACAGAGTCTTTCATTTTATTTGCTCAGGGGTGGCCGTTATTGCGCGG AATCGAGGCGAAGATATTGTAACAAATATGTGCGAACCATTACTTTCACA CCTGCACGATCGAGGATACATACTGGTATACATACAATATACAAGTACTC GTTGGATGGGCGCAGTTGACTCTCCTGTTGCTGAGCGGCAAATGTCCACG TCGATATAAAAGAGTGAACCGTCGTATGATAACAACACGTGCATCGGTCT AGACATTTCTTAATTTGATTGATATCAGTTATTTTCTCTGCGGACAAGCG CGGTTTGACTTTTTATCAAGTAGGGGCGAGAACCGTCGTGAACGACCCAT GCTCTCCGTATTTCCTACGCTACGCTCTTCAGTGCAATTTTTTTTCCAAA CCTACTGTTATACTTGCGACACCCGGCGGCGCAGGCGATGACGTGCTTCA AGCGAGCAGGGGCCGACGTGATCCTGACCTACTACGCCAAAGACGCGGCG AGGTGGCTCTGCGAAGATGGTTTCCCGTAATAGCAAAATAGGTCTCAATT TCTTCTTGTGTGCGAGCTCTGTTCCAAGATACTCGCATCTTGGACGAGAA TATCGTATCGTACTAAATATACCTGGTATACTGTACCGGGGTATTATTAT ATATCATGAGTATAAAATTACTAGTAGTGATCATATTTGTGCCACGCGCA GGCC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig705:332002..341955-

>mRNA_F-serratus_M_contig705.18261.1 ID=mRNA_F-serratus_M_contig705.18261.1|Name=mRNA_F-serratus_M_contig705.18261.1|organism=Fucus serratus male|type=CDS|length=2556bp|location=Sequence derived from alignment at F-serratus_M_contig705:332002..341955- (Fucus serratus male)
ATGAAGACTGTGCCAATGGCGCCATCCTTGTTTGGGGTGCTGATCCTTGT
GACGGATGAAGACTGTGCCAATGGCGCCATCCTTGTTTGGGGTGCTGATC
CTTGTGACGGTCTGTGAGGCGTTCGTGGCACCGAGGCCGCCGCTCGCCGG
GCTGGCCCCCTCCTCGTTCGCCAGCGGCGTCGGCATCACCCCAACCTGCG
CACCCGCTGGGGTCGTGACCAGCATGGTGGCGGCGCCCAACAGTATCTCG
GCCGGAGCGACGGAGACGCGGGCGGGAGCGGCGGCGTACAACCCGTTGGA
TGGACCCAACGCTCCCCTCCGCTCTAACAACAACGGAGAGTCTGTGAGGC
GTTCGTGGCACCGAGGCCGCCGCTCGCCGGGCTGGCCCCCTCCTCGTTCG
CCAGCGGCGTCGGCATCACCCCAACCTGCGCACCCGCTGGGGTCGTGACC
AGCATGGTGGCGGCGCCCAACAGTATCTCGGCCGGAGCGACGGAGACGCG
GGCGGGAGCGGCGGCGTACAACCCGTTGGATGGACCCAACGCTCCCCTCC
GCTCTAACAACAACGGAGAGGTGTGGCGTCCTCAGAAAGCGCGGCCGAGG
CGTAATCGCAAGAGTGAGGCGATGCGCTCCATGGTTCGCGAGAACATCGT
AAGACCTGCTAACTTCATTTACCCTCTCTTCATCCACGACAAGGTGTGGC
GTCCTCAGAAAGCGCGGCCGAGGCGTAATCGCAAGAGTGAGGCGATGCGC
TCCATGGTTCGCGAGAACATCGTAAGACCTGCTAACTTCATTTACCCTCT
CTTCATCCACGACAAGGATTTTGAGGTGGAGATTCAGTCGATGCCCGGCT
GTCTCCGGCATAGCCTCCCGCACATGCTCGAGGAAGTTGAGGAGGCTTGG
AAGTTCGGAGTGCGCACCTTCGTCCTCTTCCCTCAGGATTTTGAGGTGGA
GATTCAGTCGATGCCCGGCTGTCTCCGGCATAGCCTCCCGCACATGCTCG
AGGAAGTTGAGGAGGCTTGGAAGTTCGGAGTGCGCACCTTCGTCCTCTTC
CCTCAGGTGCCCGACCACCTCAAGACCAATTATGGGGAGGAATGCTACAA
TCCCGAAGGCATCGTACCGCGAGCCGTGAGCATGATCAAGGAGAAGTTCC
CGGACAGCATCGTGTGCACCGACGTGGCTCTGGATCCTTACAGCGACCAG
GGCCACGACGGTGTGGTCAAGGACGGCCAAATTCTCAACGACGAGACTAT
CATGCAGCTCACCAAGCAGGTGCCCGACCACCTCAAGACCAATTATGGGG
AGGAATGCTACAATCCCGAAGGCATCGTACCGCGAGCCGTGAGCATGATC
AAGGAGAAGTTCCCGGACAGCATCGTGTGCACCGACGTGGCTCTGGATCC
TTACAGCGACCAGGGCCACGACGGTGTGGTCAAGGACGGCCAAATTCTCA
ACGACGAGACTATCATGCAGCTCACCAAGCAGGTGGTGTGCCAAGCTCGC
GCTGGCGCTGACATTGTAGCGCCATCAGATATGATGGACGGGCGGATCGG
AGCGATCCGGGACGCCCTCGACGCGGAAGGTTTCACGAACGTCTCCATCA
TGGTGGTGTGCCAAGCTCGCGCTGGCGCTGACATTGTAGCGCCATCAGAT
ATGATGGACGGGCGGATCGGAGCGATCCGGGACGCCCTCGACGCGGAAGG
TTTCACGAACGTCTCCATCATGGCGTACACGGCCAAGTACGCGTCGGCTT
TCTACGGACCATTCCGCGATGCCCTGGACTCACACCCCGGATTCGGCGAC
AAGAAGACGTATCAGCAGGATCCCGCGAACGGTAGGGAGGCGCTGCTCGA
GGCTGCTCTAGATGCCGAGGAGGGAGCGGACATGCTAATGGCGTACACGG
CCAAGTACGCGTCGGCTTTCTACGGACCATTCCGCGATGCCCTGGACTCA
CACCCCGGATTCGGCGACAAGAAGACGTATCAGCAGGATCCCGCGAACGG
TAGGGAGGCGCTGCTCGAGGCTGCTCTAGATGCCGAGGAGGGAGCGGACA
TGCTAATGGTGAAGCCCGGCATGCCGTATCTCGACGTTATCCGGCGACTC
AAAGAGAGCTCCAATCTTCCCATCGCCGCGTACCACGTGTCGGGGGAGTA
CGCAATGATGAAGGCGGCGGTGGAGCGGGGATGGCTCGATGAGAGGGAGG
CGGTGCTAGAGGTGAAGCCCGGCATGCCGTATCTCGACGTTATCCGGCGA
CTCAAAGAGAGCTCCAATCTTCCCATCGCCGCGTACCACGTGTCGGGGGA
GTACGCAATGATGAAGGCGGCGGTGGAGCGGGGATGGCTCGATGAGAGGG
AGGCGGTGCTAGAGGCGATGACGTGCTTCAAGCGAGCAGGGGCCGACGTG
ATCCTGACCTACTACGCCAAAGACGCGGCGAGGTGGCTCTGCGAAGATGG
TTTCCCGTAAGCGATGACGTGCTTCAAGCGAGCAGGGGCCGACGTGATCC
TGACCTACTACGCCAAAGACGCGGCGAGGTGGCTCTGCGAAGATGGTTTC
CCGTAA
back to top