prot_F-serratus_M_contig705.18259.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig705.18259.1
Unique Nameprot_F-serratus_M_contig705.18259.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length272
Homology
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BLAST of mRNA_F-serratus_M_contig705.18259.1 vs. uniprot
Match: D8LEC3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEC3_ECTSI)

HSP 1 Score: 333 bits (855), Expect = 1.720e-112
Identity = 154/262 (58.78%), Postives = 207/262 (79.01%), Query Frame = 0 
Query:    1 MLRGWWRSLALVWITASLCCSKKASGGGGEVLDILSTIGGTYTKLLDDDLSFTVSYNLEDDSRVPLSFVTGVSLTKGQDIYRRSDPTDPIARLTLSGSLLAKGRTPSGGFLLEAEDRTMGVNVNHASRRAQFRFGRSFWDGRLKVGLSPLVTYGSLRRSSVDFGNWVPSYRPLLSGLGLPSMSVQQRDVVWDWAQGMPSRSSLHGVGISMRLHAGRRGLFSATLYDARDRSRLWSLRAEAPLAKPLDIYLSADRAWQVQTTD 262
            +L  W  ++ L  ++ S   + +++GG G+ +D+LS++ GTYT  +DDDLS TVSY+L+DDS +P S++TGVS+TK QD+YR++ PT+P+ARLTL+GS L K R PSGG +++  ++T+G+N+NHA+RRAQFRF R+F DGR KVGL+P+VTYG+LRR  V+F   VP YRP LS  GLPSMS+QQR VVWDWAQGMPS S LHG+G+++RLH GRR L SATL+D  DRSRLWS+RA+ PLAKP +   +A+RAWQV TT+
Sbjct:    2 VLWRWGVAVLLALLSCSTTNAGRSTGGSGDPMDLLSSVSGTYTHFVDDDLSVTVSYDLQDDSSIPFSYLTGVSVTKAQDLYRKTAPTEPLARLTLTGSALIKQRLPSGGAMIDTGNKTVGININHAARRAQFRFTRAFMDGRFKVGLNPVVTYGALRRRRVNFSTLVPPYRPFLSESGLPSMSLQQRSVVWDWAQGMPSISPLHGLGVALRLHTGRRALLSATLFDGTDRSRLWSVRADVPLAKPSNTCFTAERAWQVPTTN 263
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BLAST of mRNA_F-serratus_M_contig705.18259.1 vs. uniprot
Match: A0A6H5J9R3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9R3_9PHAE)

HSP 1 Score: 266 bits (679), Expect = 2.990e-86
Identity = 123/191 (64.40%), Postives = 156/191 (81.68%), Query Frame = 0 
Query:   72 VSLTKGQDIYRRSDPTDPIARLTLSGSLLAKGRTPSGGFLLEAEDRTMGVNVNHASRRAQFRFGRSFWDGRLKVGLSPLVTYGSLRRSSVDFGNWVPSYRPLLSGLGLPSMSVQQRDVVWDWAQGMPSRSSLHGVGISMRLHAGRRGLFSATLYDARDRSRLWSLRAEAPLAKPLDIYLSADRAWQVQTTD 262
            VS+TK QD+YR++ PT+P+ARLTL+GS L K R PSGG +++  ++T+G+N+NHASRRAQFRF R+F DGR KVGL+P+VTYG+LRR  V+F   VP YRP LS  GLPSMS+QQR VVWDWAQGMPS S L+G+G+++RLH GRR L SATL+D  DRSRLWS+RA+ PLAKP +   +A+RAWQV TT+
Sbjct:   40 VSVTKAQDLYRKTAPTEPLARLTLTGSALIKQRLPSGGAMIDTGNKTVGININHASRRAQFRFTRAFMDGRFKVGLNPVVTYGALRRRRVNFSTLVPPYRPFLSESGLPSMSLQQRSVVWDWAQGMPSISPLNGLGVALRLHTGRRALLSATLFDGTDRSRLWSVRADVPLAKPSNTCFTAERAWQVPTTN 230
[Close]
BLAST of mRNA_F-serratus_M_contig705.18259.1 vs. uniprot
Match: A0A6H5JDN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDN2_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 5.600e-10
Identity = 30/62 (48.39%), Postives = 43/62 (69.35%), Query Frame = 0 
Query:   14 ITASLCCSKKASG----GGGEVLDILSTIGGTYTKLLDDDLSFTVSYNLEDDSRVPLSFVTG 71
            + A L CS   +G    G  + +D+LS++ GTYT  +DDDLS TVSY+L+DDS +P S++TG
Sbjct:   11 LLALLSCSTTNAGRSTAGSNDPMDLLSSVSGTYTHFVDDDLSVTVSYDLQDDSSIPFSYLTG 72
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig705.18259.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LEC3_ECTSI1.720e-11258.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J9R3_9PHAE2.990e-8664.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JDN2_9PHAE5.600e-1048.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..271
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..26
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.718

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig705contigF-serratus_M_contig705:310413..323903 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig705.18259.1mRNA_F-serratus_M_contig705.18259.1Fucus serratus malemRNAF-serratus_M_contig705 309720..323959 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig705.18259.1 ID=prot_F-serratus_M_contig705.18259.1|Name=mRNA_F-serratus_M_contig705.18259.1|organism=Fucus serratus male|type=polypeptide|length=272bp
MLRGWWRSLALVWITASLCCSKKASGGGGEVLDILSTIGGTYTKLLDDDL
SFTVSYNLEDDSRVPLSFVTGVSLTKGQDIYRRSDPTDPIARLTLSGSLL
AKGRTPSGGFLLEAEDRTMGVNVNHASRRAQFRFGRSFWDGRLKVGLSPL
VTYGSLRRSSVDFGNWVPSYRPLLSGLGLPSMSVQQRDVVWDWAQGMPSR
SSLHGVGISMRLHAGRRGLFSATLYDARDRSRLWSLRAEAPLAKPLDIYL
SADRAWQVQTTDDTPPRTSPR*
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