mRNA_F-serratus_M_contig704.18243.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig704.18243.1 vs. uniprot
Match: A0A6H5JPJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ6_9PHAE) HSP 1 Score: 203 bits (517), Expect = 2.330e-62 Identity = 108/208 (51.92%), Postives = 141/208 (67.79%), Query Frame = 1
Query: 1 VVSAALAFLEGKKRIVEELRPEDYSKVDTSIGASVGGHVRHSLDHFARCLAILNDNSDQTESGGREQDNKENSTSIRYDHRERGGTVETDPAGAFEVILFLLEQLRALPRGKAGSEKLRGILVTPAFFLGSAGASADGDQEHRFLSNLERELFFCCHHGMHHDAMIRLILKGMAESGSSGAARALVEGGKGLGVAPSTVDFREKQQQQ 624
VVSAA+ FL+GKKR+V+ L P DY+++D + GASVGGH+RH+LDHF++CL + Q + + +IRYDHR RGGT+ETDPA A I LL+QL++LPR ++ LR V P F LG G +E+ F SNLERELFFCCHHG HHDAMIRLIL+GM E G + AL + G+G GVAPST+DF +K+ ++
Sbjct: 57 VVSAAMRFLQGKKRLVDCLSPADYARMDPATGASVGGHLRHTLDHFSKCLQA----AQQQPAPDEDAVPTTTPVTIRYDHRVRGGTIETDPAAASRSISSLLQQLQSLPR----ADYLRAKRVAPMFMLGLGGGDNGIKEEYGFESNLERELFFCCHHGTHHDAMIRLILRGMGEKGEN----ALSQAGEGFGVAPSTIDFLKKRHKK 252
BLAST of mRNA_F-serratus_M_contig704.18243.1 vs. uniprot
Match: D7FP30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP30_ECTSI) HSP 1 Score: 199 bits (507), Expect = 6.710e-61 Identity = 106/208 (50.96%), Postives = 138/208 (66.35%), Query Frame = 1
Query: 1 VVSAALAFLEGKKRIVEELRPEDYSKVDTSIGASVGGHVRHSLDHFARCLAILNDNSDQTESGGREQDNKENSTSIRYDHRERGGTVETDPAGAFEVILFLLEQLRALPRGKAGSEKLRGILVTPAFFLGSAGASADGDQEHRFLSNLERELFFCCHHGMHHDAMIRLILKGMAESGSSGAARALVEGGKGLGVAPSTVDFREKQQQQ 624
VVSAA+ FL+GKKR+V+ L P DY+ +D +IGASVGGH+RH+LDHF++CL + Q + + +IRYDHR RGG +ETDPA A I LL+QL++LP + LR V P F LG G + +E+ F SNLERELFFCCHHG HHDAMI+LIL+GM E G + AL + G+ GVAPST+DF +K+ Q+
Sbjct: 53 VVSAAMRFLQGKKRLVDCLSPADYAHMDPAIGASVGGHLRHTLDHFSKCLQA----AQQQPAPDEDAVPTTTPVTIRYDHRARGGNIETDPAAASRSISSLLQQLQSLPTARY----LRAKRVAPMFMLGLGGDDNNSTKEYEFESNLERELFFCCHHGTHHDAMIQLILRGMGEKGEN----ALSQAGEAFGVAPSTIDFLKKRHQK 248
BLAST of mRNA_F-serratus_M_contig704.18243.1 vs. uniprot
Match: A0A7S1U1W9_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U1W9_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 8.400e-18 Identity = 65/174 (37.36%), Postives = 77/174 (44.25%), Query Frame = 1
Query: 1 VVSAALAFLEGKKRIV---EELRPEDYSKVDTSIGASVGGHVRHSLDHFARCLAILNDNSDQTESGGREQDNKENSTSIRYDHRERGGTVETDPAGAFEVILFLLEQLRALPRGKAGSEKLRGILVTPAFFLGSAGASADGDQEHRFLSNLERELFFCCHHGMHHDAMIRLILK 513
V+SAA L K ++ +E R E Y+ V S GASVG H+RHSL HF L +E + YD RERG +ETD A I L + +P G V F L G EH F S LERELFF HH +HHDA I ILK
Sbjct: 101 VLSAAAFSLRNKGELLASLQERRAEAYTAVSPSQGASVGQHMRHSLQHFTALLK------------------REGGAVVAYDKRERGNAIETDLEEARATIRDLEATIGGIPEDGLGER------VRVRFMLNGDGL------EHDFESTLERELFFVVHHSVHHDATIGTILK 244
BLAST of mRNA_F-serratus_M_contig704.18243.1 vs. uniprot
Match: A0A1W0A6L6_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6L6_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 1.230e-14 Identity = 65/205 (31.71%), Postives = 99/205 (48.29%), Query Frame = 1
Query: 1 VVSAALAFLEGKKRIVEELRPEDYSKVDTSIGASVGGHVRHSLDHFARCLAILNDNSDQTESGGREQDNKENSTSIRYDHRERGGTVETDPAGAFEVILFLLEQLRALPRGKAGSEKLRGILVTPAFFLGSAGASADGDQEHRFLSNLERELFFCCHHGMHHDAMIRLILKGMAESGSSGAARALVEGGKGLGVAPSTVDFREKQ 615
V A A L+ + +++ + + Y+ + + GGH+RHSLDH R LA ++++ +K + IRYD R R VE D A + + ++L + + LR V AF L + G +E S +ERE+ F HHG+HH+AMI+ ILK S AL + GVAPST++FR K+
Sbjct: 4 VRDAFRAILKQQSKLLRGISDDVYTFRCPVLEGTTGGHIRHSLDHLRRSLACPDEDT-----------SKPHEPLIRYDIRARNTAVELDRHAAMDEMDYILSLAAHVDH-----DYLRQP-VRAAFMLTAEG------KETEIHSTIEREMAFAVHHGIHHNAMIKTILKANFPS------IALPDT---FGVAPSTLNFRAKE 176
BLAST of mRNA_F-serratus_M_contig704.18243.1 vs. uniprot
Match: A0A2R5GC69_9STRA (FK506-binding protein 5 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GC69_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 4.070e-14 Identity = 60/178 (33.71%), Postives = 91/178 (51.12%), Query Frame = 1
Query: 64 EDYSKVDTSIGASVGGHVRHSLDHFARCLAILNDNSDQTESGGREQDNKENSTSIRYDHRERGGTVETDPAGAFEVILFLLEQLRALPRGKAGSEKLRGILVTPAFFLGSAGASADGDQEHRFLSNLERELFFCCHHGMHHDAMIRLILKGMAESGSSGAARALVEGGKGLGVAPSTV 597
E Y+ +G+++GGHVRH+LDH+ R L + + + S + + YD R RGG VE D + A E IL E+L ++ +E++ + F L S + D + F S REL+F HH +HH AMI+LI++ E + A+AL + G+APSTV
Sbjct: 30 EAYATKCPVVGSTIGGHVRHALDHYDRALDGILSKAKTSSS----------LSLVDYDTRLRGGDVEKDLSSAVEAILNCSERLGSI------TEEMLARPMQVQFNL-----SGNDDSKFLFESYAARELWFAAHHSIHHQAMIKLIIQCHDEKKT--LAQALP---RDFGMAPSTV 181
BLAST of mRNA_F-serratus_M_contig704.18243.1 vs. uniprot
Match: A0A5Q4EQU3_9BACT (Uncharacterized protein n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A5Q4EQU3_9BACT) HSP 1 Score: 75.9 bits (185), Expect = 1.390e-13 Identity = 54/173 (31.21%), Postives = 78/173 (45.09%), Query Frame = 1
Query: 4 VSAALAFLEGKKRIVEELRPEDYSKVDTSI-GASVGGHVRHSLDHFARCLAILNDNSDQTESGGREQDNKENSTSIRYDHRERGGTVETDPAGAFEVILFLLEQLRALPRGKAGSEKLRGILVTPAFFLGSAGASADGDQEHRFLSNLERELFFCCHHGMHHDAMIRLILKGM 519
V AAL L ++E + E Y+ ++ GA+VG H+RH+LDHF+ L+ L+ IRYD R+RG +ET + A + + L + L AL ++G + L+ P D E S L REL F HH HH AMI + + M
Sbjct: 17 VRAALRLLSDGASLLERISDEQYTLPSPALRGATVGQHIRHTLDHFSAILSSLSGEP------------------IRYDQRKRGTVIETSRSDAMDRVGQLSDALGALDSERSGVQVTVVSLLNP------------DDPETELESTLARELAFATHHATHHHAMILVAAEAM 159
BLAST of mRNA_F-serratus_M_contig704.18243.1 vs. uniprot
Match: A0A3M2CQH4_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M2CQH4_9BACT) HSP 1 Score: 75.1 bits (183), Expect = 2.600e-13 Identity = 63/202 (31.19%), Postives = 84/202 (41.58%), Query Frame = 1
Query: 1 VVSAALAFLEGKKRIVEELRPEDYSK-VDTSIGASVGGHVRHSLDHFARCLAILNDNSDQTESGGREQDNKENSTSIRYDHRERGGTVETDPAGAFEVILFLLEQLRALPRGKAGSEKLRGILVTPAFFLGSAGASADGDQEHRFLSNLERELFFCCHHGMHHDAMIRLILKGMAESGSSGAARALVEGGKGLGVAPSTVDF 603
V +AA A L + + ++ Y+K T G ++G H RH LDHF L + ++ I YDHR RGG+VET A I L L + + VT L G AD S L RELFF HH +HH AM++ I + E G +E G G APST++F
Sbjct: 15 VAAAADAILAQCESFIRDVPESHYTKPASTVTGGTIGKHARHILDHFRAALCTPSCDA------------------IDYDHRTRGGSVETSTDAACAEIAELRSLLTRITDERINEP------VTARVMLTGDGQLAD------LKSTLGRELFFATHHAIHHHAMMKTIGR---EFG--------IEAPAGFGTAPSTINF 175
BLAST of mRNA_F-serratus_M_contig704.18243.1 vs. uniprot
Match: A0A485LUE6_9STRA (Aste57867_25553 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LUE6_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 3.570e-13 Identity = 53/170 (31.18%), Postives = 80/170 (47.06%), Query Frame = 1
Query: 1 VVSAALAFLEGKKRIVEELRPEDYSKVDTSIGASVGGHVRHSLDHFARCLAILNDNSDQTESGGREQDNKENSTSIRYDHRERGGTVETDPAGAFEVILFLLEQLRALPRGKAGSEKLRGILVTPAFFLGSAGASADGDQEHRFLSNLERELFFCCHHGMHHDAMIRLIL 510
V +A A L+ + ++ L ++YS ++ AS GGHVRHSLDH R LA+ + IRYD RER VE + A + + +L A + + +L V AF L + G D S +ERE+ F HH +HH+A+I++I+
Sbjct: 26 VYNAFSAILQQQNVVLRGLSDDEYSFRCPTLHASTGGHVRHSLDHLRRSLALTD-------------------AHIRYDVRERNTLVEQNRTAAIDEVDAILAAATA---SRVDAAQLHQP-VHAAFMLSAEGTQVD------LASTVEREMAFAVHHAIHHNALIKVII 166
BLAST of mRNA_F-serratus_M_contig704.18243.1 vs. uniprot
Match: A0A6U3Y5M0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3Y5M0_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 7.610e-13 Identity = 67/214 (31.31%), Postives = 103/214 (48.13%), Query Frame = 1
Query: 1 VVSAALAFLEGKKRIVEEL--------RPEDYSKVDTSIGASVGGHVRHSLDHFARCLAILNDNSDQTESGGREQDNKENSTSIRYDHRERGGTVETDPAGAFEVILFLLEQLRALPRG-KAGSEKLRGILVTPAFFLGSAGASADGDQEHRFLSNLERELFFCCHHGMHHDAMIRLILKGMAESGSSGAARALVEGGKGLGVAPSTVDFREKQ 615
V+ + LA L K +++ L + + K +GAS+G H RHS+DH LA L +S Q S ++Q + YD R RGGT+E D + + + + + ++L AG+ ++ +F +AD E S +EREL FC HH +HH AM+R+I + G + A E +G G APST+ F +KQ
Sbjct: 4 VIKSNLAILSQKIALLDLLVSKHGATKASDAFQKTCPIVGASIGQHYRHSMDHVE--LAALVASSAQDASMQQQQ-----LGDLHYDLRVRGGTLEKDLVESRKRLSDVSDVFKSLSATIDAGNTEITTATPVTVYF----NLAADDAAEIGLPSTVERELGFCAHHAIHHLAMVRIIC--LQTVGLNEA-----ELPEGFGRAPSTILFDKKQ 199
BLAST of mRNA_F-serratus_M_contig704.18243.1 vs. uniprot
Match: A0A482SB45_9ARCH (DinB family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SB45_9ARCH) HSP 1 Score: 74.3 bits (181), Expect = 1.130e-12 Identity = 53/177 (29.94%), Postives = 81/177 (45.76%), Query Frame = 1
Query: 1 VVSAALAFLEGKKRIVEELRPEDYSKVDTSI-GASVGGHVRHSLDHFARCLAILNDNSDQTESGGREQDNKENSTSIRYDHRERGGTVETDPAGAFEVILFLLEQLRALPRGKAGSEKLRGILVTPAFFLGSAGASADGDQEHRFLSNLERELFFCCHHGMHHDAMIRLILKGMAES 528
++S A + L+ K +++ L EDY K + I +S+GGH+RHS+DH+ + + S + YD R R VET+ A + +L L ++L L K G T F + S + REL F HHG+HH +MI+L+L+GM S
Sbjct: 49 ILSQAHSMLQQKLLVLDLLTDEDYCKKNVDIFNSSIGGHLRHSMDHYEALVTAASSPSSFAD----------------YDSRSRNTLVETNRKAAKDSVLALQKKLEKLDLEKNIEVSFIGETKTFTSF--------------KLTSTVARELSFASHHGIHHMSMIKLLLQGMGYS 195 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig704.18243.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig704.18243.1 >prot_F-serratus_M_contig704.18243.1 ID=prot_F-serratus_M_contig704.18243.1|Name=mRNA_F-serratus_M_contig704.18243.1|organism=Fucus serratus male|type=polypeptide|length=215bp VVSAALAFLEGKKRIVEELRPEDYSKVDTSIGASVGGHVRHSLDHFARCLback to top mRNA from alignment at F-serratus_M_contig704:228331..228975- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig704.18243.1 ID=mRNA_F-serratus_M_contig704.18243.1|Name=mRNA_F-serratus_M_contig704.18243.1|organism=Fucus serratus male|type=mRNA|length=645bp|location=Sequence derived from alignment at F-serratus_M_contig704:228331..228975- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig704:228331..228975- >mRNA_F-serratus_M_contig704.18243.1 ID=mRNA_F-serratus_M_contig704.18243.1|Name=mRNA_F-serratus_M_contig704.18243.1|organism=Fucus serratus male|type=CDS|length=1290bp|location=Sequence derived from alignment at F-serratus_M_contig704:228331..228975- (Fucus serratus male)back to top |