prot_F-serratus_M_contig704.18238.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig704.18238.1
Unique Nameprot_F-serratus_M_contig704.18238.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length540
Homology
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BLAST of mRNA_F-serratus_M_contig704.18238.1 vs. uniprot
Match: A0A6H5KUE0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KUE0_9PHAE)

HSP 1 Score: 369 bits (947), Expect = 3.790e-119
Identity = 201/386 (52.07%), Postives = 255/386 (66.06%), Query Frame = 0 
Query:  126 EELWVVGRAMDGIEERLTAKQERLRIREIGVIERSSAVISTLDGSLEAREDDEFLEWLTAQKSLSSAPAGE----------EKATGT---NSGERVDEPGGARWERERVTNLLSETAARLDDLVAPKEESLFGEKEEPSATAGGVTKGSGPDAGGGAPEGGVLASSPPVSP---EEKLYQAKLALHRAMLSRCLSILSESLRKEQLKPGINVEQIADAARSAYLAGPHERLGTLFPLFDTHGDGHLDADGVERVVDAAVLSVASTAERCYGVAARQVLDKKSAKAMPKTMKYALMDALQVPLKRRCAFAWAENRKQVGPDEWRVSWEQFAPSRRLNYPEYDSTAANYMSDYSRQRSEWHEQRKSSRITNVYGTVLFFGVMAVDYLL 495
            EELW+VGR +D ++ RL AKQE++R+ EIGVIER +AV+S LDGSLE RE DEFL WL +Q    ++P  +          E A GT   N        GGA  ER  V   LS  +ARL+ LV  KE++LFG++ E  A      KG           GG  +  P VSP   +E LYQA+L  HRAML   LS+LS SL K+QLK G+++ ++  A RSAYLA P +RL  ++PLFDTHGDGHLD + V+  VDA VLSV + +ERCY  AAR  LDKK+A  MP TMKY L D ++VP+KRRC+FAWAENRKQVGPDEWRVSW+QFAPSRR ++PE DS A +Y++++SR+RS WH  RK  +   VYG+ LF  V+ +D LL
Sbjct:  101 EELWIVGRVLDDMDTRLGAKQEKIRVHEIGVIERFAAVVSALDGSLEPREGDEFLAWLRSQGFDDASPTPQPGGGPXXXXXETAAGTKVENKCSNGKSEGGAAEERAEVEAFLSAASARLNALVVDKEDALFGDRGEAEAEESLQAKGERGGXXXXXXXGGDASGEPVVSPNMSDEDLYQARLGAHRAMLCHFLSLLSSSLGKQQLKTGLSLGEVVAATRSAYLAAPEDRLAAVYPLFDTHGDGHLDTESVDLAVDAVVLSVTAASERCYAAAARPALDKKTAAVMPATMKYVLWDVMEVPMKRRCSFAWAENRKQVGPDEWRVSWDQFAPSRRQHFPEMDSVARDYVAEFSRRRSAWHTSRKGRKEAMVYGSALFVAVLIIDNLL 486
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BLAST of mRNA_F-serratus_M_contig704.18238.1 vs. uniprot
Match: A0A836CPD1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPD1_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.460e-13
Identity = 38/98 (38.78%), Postives = 54/98 (55.10%), Query Frame = 0 
Query:  395 MPKTMKYALMDALQVPLKRRCAFAWAENRKQVGPDEWRVSWEQFAPSRRLNYPEYDSTAANYMSDYSRQRSEWHEQRKSSRITNVYGTVLFFGVMAVD 492
            MP  ++YA  D L  P KRRCAFA+AE RKQVGP EW V+ + F  ++R  + +        M     +R +WH  RK  +   +YG +LF   + +D
Sbjct:    1 MPSALRYATWDRLDFPSKRRCAFAFAEGRKQVGPVEWHVTADAFLETQRTYFVDLVRVGGALMDVMEDERWQWHMLRKRRKRAAIYGALLFSATVVLD 98
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig704.18238.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KUE0_9PHAE3.790e-11952.07Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CPD1_9STRA1.460e-1338.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 497..539
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..478
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 479..496

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig704contigF-serratus_M_contig704:142522..147945 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig704.18238.1mRNA_F-serratus_M_contig704.18238.1Fucus serratus malemRNAF-serratus_M_contig704 142436..148871 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig704.18238.1 ID=prot_F-serratus_M_contig704.18238.1|Name=mRNA_F-serratus_M_contig704.18238.1|organism=Fucus serratus male|type=polypeptide|length=540bp
MVLISSSLRTSLVEAAMVRACRTHMIAGSSYGLRRRSFSSLLRPLRPSRP
QLKSFTARQLSLTATRPPTPARRRSFALDPESWMKGGVRGKSTVTAEAAG
KAAATGAAPEGAGGDEGSEKESGKTEELWVVGRAMDGIEERLTAKQERLR
IREIGVIERSSAVISTLDGSLEAREDDEFLEWLTAQKSLSSAPAGEEKAT
GTNSGERVDEPGGARWERERVTNLLSETAARLDDLVAPKEESLFGEKEEP
SATAGGVTKGSGPDAGGGAPEGGVLASSPPVSPEEKLYQAKLALHRAMLS
RCLSILSESLRKEQLKPGINVEQIADAARSAYLAGPHERLGTLFPLFDTH
GDGHLDADGVERVVDAAVLSVASTAERCYGVAARQVLDKKSAKAMPKTMK
YALMDALQVPLKRRCAFAWAENRKQVGPDEWRVSWEQFAPSRRLNYPEYD
STAANYMSDYSRQRSEWHEQRKSSRITNVYGTVLFFGVMAVDYLLTDGRS
PPLSARTPVVRFEAGLFLHKELFTRLGKREPPSRNHPQG*
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