mRNA_F-serratus_M_contig124.1821.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig124.1821.1 vs. uniprot
Match: D7G694_ECTSI (HHH_8 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G694_ECTSI) HSP 1 Score: 234 bits (598), Expect = 9.500e-68 Identity = 142/271 (52.40%), Postives = 185/271 (68.27%), Query Frame = 3
Query: 144 VESLMNAARDIKIKLPRGKDKSVREVEDALEHARTLADDEG----REVVAADVLKVLEERLGVKKRKAKEVTAKEE----QGAPKSAAPS--VLTEVWNASKKGDRKALAAKLVDVAKSRGVKMPKEEPEARMGAFAALMGVKGEGGEFTVKDAVEALEDKYGKDSNWVDPNETAPKKQ-RPSKAKQCACPDNTGLADAFDELAGLKFKEGSKSGFVYKKVVTIIKELPTPMTEAPKKGQIKGVGASSIAKISEFLSTGTMEELEEMRANA 923
VE+L AA D I LP+ K KS REVE+ALE A L D+ G E + LK+L ++ GVKK + K T K + +GA K AAPS L EVW+ S K +RK AKL+++AK+RGV++P++ A MG +MG K + VKDAVE L DK+GKD WVDP ++ PKK+ RPS AKQC CP+N LADAFDELAGL FKEGSK+G VYKKVV+ IK++P P+T APKKG++ G+GA +I KI+EFL+TG ++ LE+ RA +
Sbjct: 10 VEALRKAAVDRGIDLPKAKKKSSREVEEALETAG-LEDETGGSGDNEALKKAALKILAKKFGVKKEQQK-ATGKRKADGGKGAAKPAAPSSSALDEVWDVSTKEERKKYVAKLIEIAKARGVRIPEDAQAASMGVGTVIMGSKDADNKLKVKDAVEELTDKFGKDPAWVDPEDSGPKKKKRPSTAKQCTCPENKALADAFDELAGLYFKEGSKAGGVYKKVVSAIKDMPKPLTTAPKKGEVPGIGAKTIQKINEFLATGKIQTLEDKRAES 278
BLAST of mRNA_F-serratus_M_contig124.1821.1 vs. uniprot
Match: A0A7S2EDG8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EDG8_TRICV) HSP 1 Score: 69.7 bits (169), Expect = 7.390e-10 Identity = 54/181 (29.83%), Postives = 94/181 (51.93%), Query Frame = 3
Query: 405 WNASKKGDRKALAAKLVDVAKSRGVKMPKEEPEARMGAFAALMGVKGEGGEFTVKDAVEALEDKYGKDSNWVDPNETAPKKQRPSKAKQCACPDNTGLADAFDELAGLKFKEGSK-SGFVYKKVVTIIKELPTPMTEAP-------KKGQIKGVGASSIAKISEFLSTGTMEELEEMRANA 923
W+ S K K A ++ + + + + +P+++ +AR ++ KG+ + DA+ + ++G +V+ + A K+Q+ + N L +AF E+A L KEG Y+KV +IK+L +TEA KK ++ GVG +S K+ EFLSTG +E+LEE++ A
Sbjct: 25 WDLSNKDGIKKAAKDMLKICQDK-IALPQDDKKARQAVGKIVVANKGQ----SANDALAEIISQFG----FVEVKKAAKKRQQAAHKSLAKVAANVPLLEAFMEMADLSQKEGDHFKSSAYRKVSGVIKDLEYEITEANALGLGKGKKTKVAGVGKASAEKMHEFLSTGKIEKLEELKMAA 196
BLAST of mRNA_F-serratus_M_contig124.1821.1 vs. uniprot
Match: A0A7S4W3U6_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W3U6_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 1.880e-8 Identity = 44/102 (43.14%), Postives = 59/102 (57.84%), Query Frame = 3
Query: 642 KKQRPSKAKQCACPDNTGLADAFDELAGLKFKEGSKS-GFVYKKVVTIIKELPTPMTEAPKKGQIKG------VGASSIAKISEFLSTGTMEELEEMRANAA 926
KKQ S + C +N G+ A EL L FKEG+++ G YKKV IKEL +T KG KG +G S K+ EF++TGT+E+LEE RA+A+
Sbjct: 381 KKQAKSLSAVCGNAENVGVMQAILELGDLYFKEGNRNAGATYKKVAQAIKELTFEITAENAKGLGKGKTKIANIGKGSAEKMYEFVTTGTIEKLEEKRASAS 482
BLAST of mRNA_F-serratus_M_contig124.1821.1 vs. uniprot
Match: A0A0S4KDP3_BODSA (PADR1 domain-containing protein n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4KDP3_BODSA) HSP 1 Score: 66.2 bits (160), Expect = 3.140e-8 Identity = 35/93 (37.63%), Postives = 58/93 (62.37%), Query Frame = 3
Query: 642 KKQRPSKAKQCACPDNTGLADAFDELAGLKFKEGSK-SGFVYKKVVTIIKELPTPMTEAPKKGQIKGVGASSIAKISEFLSTGTMEELEEMRA 917
K P+ A +CP N L D F+ L + K+G+K +G Y+KVV +++ L T +T + GVG +S+ K +EFL+TGT+++L+E++A
Sbjct: 29 KADAPASAADGSCP-NQDLIDVFESLLVYESKDGNKWAGVAYRKVVNVLRGLKTKVTSGKDIAHLDGVGDASVKKTTEFLTTGTIKKLDELKA 120
BLAST of mRNA_F-serratus_M_contig124.1821.1 vs. uniprot
Match: E1Z255_CHLVA (HHH_8 domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z255_CHLVA) HSP 1 Score: 61.6 bits (148), Expect = 2.750e-6 Identity = 36/74 (48.65%), Postives = 46/74 (62.16%), Query Frame = 3
Query: 687 NTGLADAFDELAGLKFKEGSKSGFVYKKVVTIIKELPTPMTEAPKKGQIKGVGASSIAKISEFLSTGTMEELEE 908
NT +A AF +L L E K+G +KKV II PT +T A +KGVG SS+AKI+EFL TGT+ L+E
Sbjct: 288 NTAMAAAFRQLVDLCKGEPFKAG-AFKKVADIIDAHPTVITSAKDLSAVKGVGKSSLAKITEFLETGTLAALQE 360
BLAST of mRNA_F-serratus_M_contig124.1821.1 vs. uniprot
Match: A0A836BB93_9CHLO (HHH_8 domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836BB93_9CHLO) HSP 1 Score: 57.4 bits (137), Expect = 2.940e-6 Identity = 39/85 (45.88%), Postives = 46/85 (54.12%), Query Frame = 3
Query: 675 ACPDNTGLADAFDELAGLKFKEGSKS-------GFVYKKVVTIIKELPTPMTEAPKK--GQIKGVGASSIAKISEFLSTGTMEEL 902
A P+N L D FDELA F EGSK+ G KK + E P+ +T A K + GVG SIAKI EFL TGT+ EL
Sbjct: 15 AVPENQALVDVFDELAQKAF-EGSKTDPKAKFKGIALKKAGKALAEFPSQITLANLKEVSSLPGVGKGSIAKIKEFLETGTVVEL 98
BLAST of mRNA_F-serratus_M_contig124.1821.1 vs. uniprot
Match: A0A7R9ZAF0_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZAF0_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 4.570e-5 Identity = 36/99 (36.36%), Postives = 54/99 (54.55%), Query Frame = 3
Query: 642 KKQRPSKAKQCACPDNTGLADAFDELAGLKFKEG-SKSGFVYKKVVTIIKELPTPMTE------APKKGQIKGVGASSIAKISEFLSTGTMEELEEMRA 917
+KQ+ + A C P N + + F E++ L FKEG S G K IK + +TE KG++ G+G S KI EF++TG +E+LE++RA
Sbjct: 277 RKQQEALASVCGHPANASVVEVFLEMSKLWFKEGDSMRGAATAKAAEAIKGIKYEITEENAKGLGKGKGKVAGIGKGSSEKIYEFVTTGRIEKLEDLRA 375 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig124.1821.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig124.1821.1 >prot_F-serratus_M_contig124.1821.1 ID=prot_F-serratus_M_contig124.1821.1|Name=mRNA_F-serratus_M_contig124.1821.1|organism=Fucus serratus male|type=polypeptide|length=271bp MSGGDKMSVESLMNAARDIKIKLPRGKDKSVREVEDALEHARTLADDEGRback to top mRNA from alignment at F-serratus_M_contig124:410405..428464- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig124.1821.1 ID=mRNA_F-serratus_M_contig124.1821.1|Name=mRNA_F-serratus_M_contig124.1821.1|organism=Fucus serratus male|type=mRNA|length=18060bp|location=Sequence derived from alignment at F-serratus_M_contig124:410405..428464- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig124:410405..428464- >mRNA_F-serratus_M_contig124.1821.1 ID=mRNA_F-serratus_M_contig124.1821.1|Name=mRNA_F-serratus_M_contig124.1821.1|organism=Fucus serratus male|type=CDS|length=1626bp|location=Sequence derived from alignment at F-serratus_M_contig124:410405..428464- (Fucus serratus male)back to top |