mRNA_F-serratus_M_contig7035.18235.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig7035.18235.1 vs. uniprot
Match: D8LQB1_ECTSI (INCENP_ARK-bind domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQB1_ECTSI) HSP 1 Score: 123 bits (308), Expect = 2.950e-25 Identity = 53/82 (64.63%), Postives = 63/82 (76.83%), Query Frame = 3
Query: 2403 DMSSTPDWARGDNLANILDRQFGGPKPLNPDKIFPEVPTCNLEHMFNTNNPKWDRTSSVDWDVGRPTIAERIAYNREMGYQE 2648
D S+ PDWARG LA ILD+Q+GGP PLNPDKIFPE TCNLEH+FNT KWDR+SS +W R TIAE++AY R MG+ +
Sbjct: 549 DKSAIPDWARGKALAKILDKQYGGPNPLNPDKIFPEFFTCNLEHIFNTKKQKWDRSSSGNWHTDRLTIAEKLAYQRAMGFDK 630
BLAST of mRNA_F-serratus_M_contig7035.18235.1 vs. uniprot
Match: A0A6H5L3Q6_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Q6_9PHAE) HSP 1 Score: 123 bits (308), Expect = 8.260e-25 Identity = 53/82 (64.63%), Postives = 63/82 (76.83%), Query Frame = 3
Query: 2403 DMSSTPDWARGDNLANILDRQFGGPKPLNPDKIFPEVPTCNLEHMFNTNNPKWDRTSSVDWDVGRPTIAERIAYNREMGYQE 2648
D S+ PDWARG LA ILD+Q+GGP PLNPDKIFPE TCNLEH+FNT KWDR+SS +W R TIAE++AY R MG+ +
Sbjct: 964 DKSAIPDWARGKALAKILDKQYGGPNPLNPDKIFPEFFTCNLEHIFNTKKQKWDRSSSGNWHTDRLTIAEKLAYQRAMGFDK 1045
BLAST of mRNA_F-serratus_M_contig7035.18235.1 vs. uniprot
Match: D7G3R5_ECTSI (INCENP_ARK-bind domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3R5_ECTSI) HSP 1 Score: 102 bits (255), Expect = 1.320e-21 Identity = 48/96 (50.00%), Postives = 65/96 (67.71%), Query Frame = 3
Query: 2367 ESGEDGEEEDP----FDMSSTPDWARGDNLANILDRQFGGPKPLNPDKIFPEVPTCNLEHMFNTNNPKWDRTSSVDWDVGRPTIAERIAYNREMGY 2642
ESG D E DP + + P+WA + +A L+RQ+GG KP+NP+KIF + TC+LE +F+TN KWDR S+ DW R TIAE++AY+R MGY
Sbjct: 22 ESGSDDEGNDPALKKLESTFVPEWATNEGIAAALERQYGGDKPINPNKIFVDFYTCSLETIFDTNKKKWDRKSTGDWMSDRLTIAEKLAYDRAMGY 117
BLAST of mRNA_F-serratus_M_contig7035.18235.1 vs. uniprot
Match: A0A7S2M2L9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M2L9_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 4.200e-13 Identity = 40/79 (50.63%), Postives = 52/79 (65.82%), Query Frame = 3
Query: 2418 PDWARGDNLANILDRQFG-GPKPLNPDKIFPEVPTCNLEHMFNTNNPKWDR-TSSVDWDVGRPTIAERIAYNREMGYQE 2648
P+WA+ NL L+RQF GP L+PDKIF EV TCNLE +F+ ++ R TSS +W TIAE++ Y R MGYQ+
Sbjct: 231 PEWAQRHNLHRALERQFADGPNRLDPDKIFGEVLTCNLEEIFDKKKSRYQRRTSSGNWTKDHVTIAEKLTYKRTMGYQK 309
BLAST of mRNA_F-serratus_M_contig7035.18235.1 vs. uniprot
Match: A0A1E7FGC0_9STRA (INCENP_ARK-bind domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FGC0_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 5.710e-10 Identity = 33/80 (41.25%), Postives = 49/80 (61.25%), Query Frame = 3
Query: 2418 PDWARGDNLANILDRQFGG---PKPLNPDKIFPEVPTCNLEHMFNTNNPKW--DRTSSVDWDVGRPTIAERIAYNREMGY 2642
P WA NL L++Q+ G + ++PD+IFPEV +C+LE +F T K R SS +W + T+AE++ Y REMG+
Sbjct: 34 PTWALRANLYPALEKQYNGHIGSRKVDPDEIFPEVQSCDLEAIFGTKKAKAYRSRASSGNWAQDKVTVAEKLVYKREMGF 113
BLAST of mRNA_F-serratus_M_contig7035.18235.1 vs. uniprot
Match: A0A7S2S9K2_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S9K2_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 1.340e-9 Identity = 32/79 (40.51%), Postives = 49/79 (62.03%), Query Frame = 3
Query: 2418 PDWARGDNLANILDRQF-GGPKPLNPDKIFPEVPTCNLEHMFNTNNPKW-DRTSSVDWDVGRPTIAERIAYNREMGYQE 2648
P+WA NL L+RQF GP ++PD++FP+V TC+LE +F+ ++ RTSS +W + AE + Y R MG+ +
Sbjct: 170 PEWAMRSNLLKALERQFLDGPDRIDPDQLFPQVTTCDLEAIFDQKKKRYATRTSSANWAKDSVSAAETLVYKRTMGFDK 248
BLAST of mRNA_F-serratus_M_contig7035.18235.1 vs. uniprot
Match: A0A835ZCU2_9STRA (SAP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCU2_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 3.870e-9 Identity = 33/69 (47.83%), Postives = 46/69 (66.67%), Query Frame = 3
Query: 2418 PDWARGDNLANILDRQFGGPKPLNPDKIFPEVPTCNLEHMFNTNNPKW-DRTSSVDWDVGRPTIAERIA 2621
P WARG L L+RQFGG P+NPD IF E TC+L+H+F+T ++ R+SS +W + T+ ER+A
Sbjct: 461 PAWARGKQLEAALERQFGGSAPINPDTIFAEFFTCDLQHIFDTRKKRYVTRSSSGNWLQDKLTLPERLA 529
BLAST of mRNA_F-serratus_M_contig7035.18235.1 vs. uniprot
Match: D8LJ56_ECTSI (INCENP_ARK-bind domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ56_ECTSI) HSP 1 Score: 67.4 bits (163), Expect = 2.120e-8 Identity = 32/75 (42.67%), Postives = 45/75 (60.00%), Query Frame = 3
Query: 2418 PDWARGDNLANILDRQFGGPKPLNPDKIFPEVPTCNLEHMFNTNNPKWDRT-SSVDWDVGRPTIAERIAYNREMG 2639
P WA+G L+ L RQ+ + ++PDKIFPEV TC+LE +F N ++ R SS +W R T E + Y R +G
Sbjct: 196 PAWAKGSALSEALTRQYATGQKVDPDKIFPEVFTCDLEAIFPVNKSRYHRRGSSANWTPDRVTPQEVLTYKRSVG 270
BLAST of mRNA_F-serratus_M_contig7035.18235.1 vs. uniprot
Match: A0A485LMU5_9STRA (Aste57867_23167 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LMU5_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 2.720e-8 Identity = 42/100 (42.00%), Postives = 60/100 (60.00%), Query Frame = 3
Query: 2364 PESGEDGEEEDPFDMSSTPDWARGDNLANILDRQFGGPKPLNPD-KIFPE-VPTCNLEHMFNTNNPKWD-----RTSSVDWDVGRPTIAERIAYNREMGY 2642
PES E G +D + PDWA+ + L L RQFG P+ ++P IFP+ V +C+LE +F +PK RTSS +W RPT+ E++AY R+MG+
Sbjct: 1072 PESDESGNSDD--EQKKIPDWAQREALDRALARQFG-PEAVDPTPSIFPDFVDSCDLEAIFQPVDPKKKKRFNKRTSSGNWLADRPTMREKVAYKRDMGF 1168
BLAST of mRNA_F-serratus_M_contig7035.18235.1 vs. uniprot
Match: A0A6G0X277_9STRA (SAP domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X277_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 1.060e-7 Identity = 41/100 (41.00%), Postives = 60/100 (60.00%), Query Frame = 3
Query: 2364 PESGEDGEEEDPFDMSSTPDWARGDNLANILDRQFGGPKPLNPD-KIFPE-VPTCNLEHMFNTNNPKWD-----RTSSVDWDVGRPTIAERIAYNREMGY 2642
PES + G +D + P+WA+ D L + L RQFG P+ ++P IFP+ V TC+LE +F + K RTSS +W +PTI E++AY R+MG+
Sbjct: 1058 PESDDSGNSDD--ERKKIPNWAQRDALEDALARQFG-PRAIDPTPSIFPDFVDTCDLEAIFQPVDSKKKKRFNKRTSSGNWLADKPTIREKVAYKRDMGF 1154 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7035.18235.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig7035.18235.1 >prot_F-serratus_M_contig7035.18235.1 ID=prot_F-serratus_M_contig7035.18235.1|Name=mRNA_F-serratus_M_contig7035.18235.1|organism=Fucus serratus male|type=polypeptide|length=878bp MKTRAALAVEKVAAAIAAAAAIRKRAESAASPTKHGNSHLMPPPSHKADLback to top mRNA from alignment at F-serratus_M_contig7035:13719..21796- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig7035.18235.1 ID=mRNA_F-serratus_M_contig7035.18235.1|Name=mRNA_F-serratus_M_contig7035.18235.1|organism=Fucus serratus male|type=mRNA|length=8078bp|location=Sequence derived from alignment at F-serratus_M_contig7035:13719..21796- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig7035:13719..21796- >mRNA_F-serratus_M_contig7035.18235.1 ID=mRNA_F-serratus_M_contig7035.18235.1|Name=mRNA_F-serratus_M_contig7035.18235.1|organism=Fucus serratus male|type=CDS|length=5268bp|location=Sequence derived from alignment at F-serratus_M_contig7035:13719..21796- (Fucus serratus male)back to top |