prot_F-serratus_M_contig702.18225.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig702.18225.1
Unique Nameprot_F-serratus_M_contig702.18225.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length383
Homology
BLAST of mRNA_F-serratus_M_contig702.18225.1 vs. uniprot
Match: A0A6H5JMN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMN8_9PHAE)

HSP 1 Score: 413 bits (1062), Expect = 1.380e-140
Identity = 209/316 (66.14%), Postives = 248/316 (78.48%), Query Frame = 0
Query:   67 SSSRWRRQGCRKRSIALSGVGSIMSPXXXXXXXXXXXXXXEDGMRELTRQEGEEAAALLAANAKTHLGGRSDYNDFMESIDGVQEWLRVLAKKRVGCRRMVLGSFKRGKLLSIVAAEVVWSTGSLSRDVRICSRLIVVNPAYDKRAVGFATVDQLKSFGRQNALLLDLSPMMAVPSCRIFCLASTQTLEEDPERLFQDPLVQQFNSRVRRCCYVLDDIPEGADLGPYWYEGTLPRSVRFFFRKKFHAVNEFEVTLQWPGAGLATGSGTVGGARVIPMEEAEAAKDIPGHSMIREIERRLSNRLLAEMQGENPVLND 382
            S+SRWRR    + S+ LSGVGS ++P              EDG+RELTR+E E A    A +AK H   +S+Y+D +E + G++ W + L +KRVGC+R+VLG+FKRG L+ I AA+VVWSTG LSRDVR+   LI VNP YD R VGF T+ ++KSFG QNALLLDLSP+MAVP  R+FCL STQTL+EDPE +FQDPLVQQ+NSRVRR CYVLDDIP  ADLGPYWYEG LPRSVRFFFRK+FHAVNEFEVTLQ PGAGL+TGSGTVGGARVI M+EAEAA +IPGH  +REIERRL++RLL EMQGENPV +D
Sbjct:   60 STSRWRR----RSSLQLSGVGSTVAPPPTTQTTARGGG--EDGIRELTREESEAAILSFADSAKRHSRTQSEYDDHIELLQGMRSWGQPLTQKRVGCKRLVLGNFKRGNLVCIAAAQVVWSTGYLSRDVRLSLALIAVNPKYDMRKVGFETIKRMKSFGMQNALLLDLSPLMAVPRLRVFCLESTQTLDEDPEGVFQDPLVQQYNSRVRRSCYVLDDIPTWADLGPYWYEGVLPRSVRFFFRKRFHAVNEFEVTLQRPGAGLSTGSGTVGGARVIAMDEAEAATEIPGHGKVREIERRLASRLLEEMQGENPVRSD 369          
BLAST of mRNA_F-serratus_M_contig702.18225.1 vs. uniprot
Match: D8LH52_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH52_ECTSI)

HSP 1 Score: 398 bits (1023), Expect = 2.850e-135
Identity = 194/276 (70.29%), Postives = 228/276 (82.61%), Query Frame = 0
Query:  107 EDGMRELTRQEGEEAAALLAANAKTHLGGRSDYNDFMESIDGVQEWLRVLAKKRVGCRRMVLGSFKRGKLLSIVAAEVVWSTGSLSRDVRICSRLIVVNPAYDKRAVGFATVDQLKSFGRQNALLLDLSPMMAVPSCRIFCLASTQTLEEDPERLFQDPLVQQFNSRVRRCCYVLDDIPEGADLGPYWYEGTLPRSVRFFFRKKFHAVNEFEVTLQWPGAGLATGSGTVGGARVIPMEEAEAAKDIPGHSMIREIERRLSNRLLAEMQGENPVLND 382
            EDG+RELTR+E E A    A +AK H   +SDY+D +E + G++ W + L +KRVGC+R+VLG+FKRG L+ I AA+VVWSTG LSRDVR+   LI VNP YD R VGF T+ ++KSFG QNALLLDLSP+M VP  R+FCL STQTL+EDPE +FQDPLVQQ+NSRVRR CYVLDDIP  ADLGPYWYEG LPRSVRFFFRK+FHAVNEFEVTLQ PGAGL+TGSGTVGGARVI M+EAEAA +IPGH  +REIERRL++RLL E+QGENPV +D
Sbjct:   54 EDGIRELTREESEAAILSFADSAKRHCRTQSDYDDHIELLQGMRSWGQPLTQKRVGCKRVVLGNFKRGNLVCIAAAQVVWSTGYLSRDVRLSLALIAVNPKYDMRKVGFETIKRMKSFGMQNALLLDLSPLMTVPRLRVFCLESTQTLDEDPEGVFQDPLVQQYNSRVRRSCYVLDDIPTWADLGPYWYEGVLPRSVRFFFRKRFHAVNEFEVTLQRPGAGLSTGSGTVGGARVIAMDEAEAATEIPGHGKVREIERRLASRLLEEIQGENPVRSD 329          
BLAST of mRNA_F-serratus_M_contig702.18225.1 vs. uniprot
Match: A0A835YSI1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSI1_9STRA)

HSP 1 Score: 219 bits (557), Expect = 1.780e-65
Identity = 121/275 (44.00%), Postives = 171/275 (62.18%), Query Frame = 0
Query:  108 DGMRELTRQEGEEAAALLAANAKTHLGGRSDYNDFMESIDGVQEWLRVLAK-KRVGCRRMVLGSFKRGKLLSIVAAEVVWSTGSLSRDVRICSRLIVVNPAYDKRAVGFATVDQLKSFGRQNALLLDLSPMMAVPSCRIFCLASTQTLEEDPERLFQDPLVQQFNSRVRRCCYVLDDIPEGADLGPYWYEGTLPRSVRFFFRKKFHAV-NEFEVTLQWPGAGLATGSGTVGGARVIPMEEAEAAKDIPGHSMIREIERRLSNRLLAEMQGENPVL 380
            DG+R +T  + +EA A   A A  +    ++  + +E I  ++EW     K KR+GC++M LGS++ G+LLS+ A ++ W  G   RDVR+  RL+ +NP +DKR VGF  ++ LK+ GR NALLLD S +  VP  R+F L S +TL+ DPE +  DP    + S V+R C+VLD+IPE ADLGP+W+EGT    V F+FRK+   + NEFE++   P AG ATGSGTVGGARVI + E +  KDI G +       + S   + E  GE+P +
Sbjct:   15 DGLRPMTAAQVKEALANYKAGAFKYCQSSAEQKEQLEMISMMREWADTFEKYKRIGCKKMTLGSYRAGRLLSVAALQIEWR-GFPERDVRMVVRLLALNPMHDKRIVGFEMMESLKALGRDNALLLDCSALREVPCLRVFALGSIRTLDADPELV--DPRKLFYKSHVKRTCFVLDNIPEWADLGPFWFEGTTHDGVSFWFRKRTPMLLNEFEISWDHPKAGNATGSGTVGGARVIGIGELDQCKDIKGWAK----PEKSSTMHMEEDVGEDPEM 282          
BLAST of mRNA_F-serratus_M_contig702.18225.1 vs. uniprot
Match: A0A0G4EB14_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EB14_VITBC)

HSP 1 Score: 78.6 bits (192), Expect = 2.150e-12
Identity = 57/188 (30.32%), Postives = 96/188 (51.06%), Query Frame = 0
Query:  202 IVVNPAY--DKRAVGFATVDQLKSFGRQNALLLDLSPMMAVPSCRIFCL-ASTQTLEEDPERLFQDPLVQQFNSRVRRCCYVLDDIPEGADLGPYWYEGTLPRSVRFFFRKKFHAVNEFEVTLQWPGAGLA-TGSGTVGGARVIPMEEAEAAKD---IPGH--------SMIREIERRLSNRLLAEMQ 374
            + +NP +  ++       + +++  G++NA+++DL+ +   PS   F L  S  TL+ +P  +  DP V +  + +R     +D      DL  YW++        F+FR++F +  EFEV  + P  G++ TGSGTVGGA ++P+  + + K    IPG+        S +  I RRL  RL   MQ
Sbjct:  166 MALNPTFPGERDRAALDLLREIRELGKENAMIVDLTALKDFPSLMKFWLDGSFTTLDIEP--VTNDPRVVRHKALLRSPTLTIDG--PWPDLPFYWFQSECDDGCAFYFRRRFRSNTEFEVLFEPPRVGVSMTGSGTVGGALIVPLIPSPSNKQDVSIPGNVSMGRGQLSAVCAIRRRLKERLDTMMQ 349          
BLAST of mRNA_F-serratus_M_contig702.18225.1 vs. uniprot
Match: A0A0G4EDF6_VITBC (Uncharacterized protein (Fragment) n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EDF6_VITBC)

HSP 1 Score: 62.0 bits (149), Expect = 7.140e-8
Identity = 44/130 (33.85%), Postives = 65/130 (50.00%), Query Frame = 0
Query:  257 DPERLFQDPLVQQFNSRVRRCCYVLDDIPEGADLGPYWYEGTLPRSVRFFFRKKFHAVNEFEVTLQWPGAGLA-TGSGTVGGARVIPMEEAEAAKD---IPGH--------SMIREIERRLSNRLLAEMQ 374
            D E +  DP V +  + +R     +D      DL  YW++        F+FR++F +  EFEV  + P  G++ TGSGTVGGA ++P+  + + K    IPG+        S +  I RRL  RL   MQ
Sbjct:    7 DIEPVTNDPRVVRHKALLRSPTLTIDG--PWPDLPFYWFQSECDDGCAFYFRRRFRSNTEFEVLFEPPRVGVSMTGSGTVGGALIVPLIPSPSNKQDVSIPGNVSMGRGQLSAVCAIRRRLKERLDTMMQ 134          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig702.18225.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JMN8_9PHAE1.380e-14066.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LH52_ECTSI2.850e-13570.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YSI1_9STRA1.780e-6544.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0G4EB14_VITBC2.150e-1230.32Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A0G4EDF6_VITBC7.140e-833.85Uncharacterized protein (Fragment) n=1 Tax=Vitrell... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..382
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.679

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig702contigF-serratus_M_contig702:137444..155271 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig702.18225.1mRNA_F-serratus_M_contig702.18225.1Fucus serratus malemRNAF-serratus_M_contig702 137132..156404 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig702.18225.1 ID=prot_F-serratus_M_contig702.18225.1|Name=mRNA_F-serratus_M_contig702.18225.1|organism=Fucus serratus male|type=polypeptide|length=383bp
MKRSSRVAFFLALVDKSFAFCPAVTGDLLSFSSNPIALLVTGTGNSVSGG
FACEVLSRCPRGSTGQSSSRWRRQGCRKRSIALSGVGSIMSPPPPTLATG
RGGGGGEDGMRELTRQEGEEAAALLAANAKTHLGGRSDYNDFMESIDGVQ
EWLRVLAKKRVGCRRMVLGSFKRGKLLSIVAAEVVWSTGSLSRDVRICSR
LIVVNPAYDKRAVGFATVDQLKSFGRQNALLLDLSPMMAVPSCRIFCLAS
TQTLEEDPERLFQDPLVQQFNSRVRRCCYVLDDIPEGADLGPYWYEGTLP
RSVRFFFRKKFHAVNEFEVTLQWPGAGLATGSGTVGGARVIPMEEAEAAK
DIPGHSMIREIERRLSNRLLAEMQGENPVLND*
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