mRNA_F-serratus_M_contig1008.182.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1008.182.1
Unique NamemRNA_F-serratus_M_contig1008.182.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1008.182.1 vs. uniprot
Match: A0A6H5JGY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY9_9PHAE)

HSP 1 Score: 241 bits (616), Expect = 7.240e-76
Identity = 121/193 (62.69%), Postives = 148/193 (76.68%), Query Frame = 1
Query:  166 NFDGKIGIFPFTRQVQAQRNSRHRAAGTWVTTMVEVTKEVYKAKMLEDVFPAIKAQWPGGPGE-VFVQQDNAPAHNIANDPDIVAAGTADGWNIKLLNQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVKRAFTEQESEALGRVWTTYQSVLEKIMLAKGDNDFKMPHLHKKTANRRGAPIPRALP 741
            NF GK+GIF FT Q  AQRNSR+RAAGT  T  VEVTKEV+K K++++VFPAIKA+WPGG G  +++Q DN P+H I  DPD+VAAG ADGW+I+L+NQP NSPDTNILDLGFFN++QSLQDR T  TVDE I EVKRAF EQ      +VW + Q++L+ I+LAKG+N FK+PHL K  A   G  IP+ LP
Sbjct:   87 NFTGKLGIFQFTVQRAAQRNSRNRAAGTMETKCVEVTKEVFKRKVVDEVFPAIKARWPGGRGRTIYIQLDNKPSHRINADPDVVAAGIADGWDIRLINQPSNSPDTNILDLGFFNAVQSLQDRNTPRTVDEFITEVKRAFEEQSPSTHDKVWVSLQAILQ-IILAKGNNTFKLPHLKKDNAANSGRSIPKELP 278          
BLAST of mRNA_F-serratus_M_contig1008.182.1 vs. uniprot
Match: A0A6H5KWV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWV2_9PHAE)

HSP 1 Score: 239 bits (610), Expect = 6.380e-72
Identity = 125/203 (61.58%), Postives = 152/203 (74.88%), Query Frame = 1
Query:    4 VDEEWFFIKKQGQRYYLGQGEELPTHRVQHKSHIKKVMFLAAVARPRRNTVANRNFDGKIGIFPFTRQVQAQRNSRHRAAGTWVTTMVEVTKEVYKAKMLEDVFPAIKAQWPGGPGEVFVQQDNAPAHNIANDPDIVAAGTADGWNIKLLNQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVKRAFTEQESEALGR 612
            +DE+WF+I KQGQRYY  +GE LP  +VQHKSH+ KVMFLAAVARPR ++  +R FDGKIGI+PFT Q  AQRN R+ AAGT VT  VEV + +YK K+  +VFP I+A++P  P  +F QQ+NAP H    DPD+VAA       I+L+NQPPNSPD NILDLGFFNSIQSLQDRTT  TV+EL+ EV+RA   Q+ E LGR
Sbjct:   60 LDEKWFYICKQGQRYYFYEGEHLPIRKVQHKSHVIKVMFLAAVARPRYDSSRSRQFDGKIGIYPFTVQRAAQRNGRNMAAGTMVTHSVEVNRTLYK-KLNNNVFPDIRAKFPSSP-IIFAQQENAPGHRAMEDPDVVAAAGQGAGRIELVNQPPNSPDCNILDLGFFNSIQSLQDRTTPTTVEELVAEVERALWAQKPETLGR 260          
BLAST of mRNA_F-serratus_M_contig1008.182.1 vs. uniprot
Match: A0A6A5AA16_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AA16_9STRA)

HSP 1 Score: 226 bits (576), Expect = 3.650e-68
Identity = 112/232 (48.28%), Postives = 158/232 (68.10%), Query Frame = 1
Query:    4 VDEEWFFIKKQGQRYYLGQGEELPTHRVQHKSHIKKVMFLAAVARPRRNTVANRNFDGKIGIFPFTRQVQAQRNSRHRAAGTWVTTMVEVTKEVYKAKMLEDVFPAIKAQWPGGPGE-VFVQQDNAPAHNIANDPDIVAAGTADGWNIKLLNQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVKRAFTEQESEALGRVWTTYQSVLEKIMLAKGDNDFKMPHLHK 696
            +DE+WF+I +  +R+YL   E  P  + Q K HI KVMFL AVARPR ++   + +DGK+G++PF     A+R S++R  GT VT  + VTK VY+  +++ V PAI+AQWPG  G  ++VQQDNA  H   +DP+++AAG  +GWNI+L+ QP  SPD N+LDLGFFN+IQSLQ +TT  T+D+LI+ V+ AF       L + + T Q V+E+ M + GDN +K+PHL K
Sbjct:  172 IDEKWFYITQVNRRFYLWHDEPTPQRKAQSKRHITKVMFLCAVARPRHDSAHRKMWDGKVGLWPFVETQLAKRRSKNRDRGTPVTVPMTVTKPVYRRFLVDKVIPAIQAQWPGRRGATIYVQQDNAKPHVAVDDPEVLAAGRKEGWNIQLMAQPAQSPDFNVLDLGFFNAIQSLQHQTTARTIDDLIKCVEDAFENLAWRVLDKTFMTLQKVMEEAMRSSGDNVYKLPHLKK 403          
BLAST of mRNA_F-serratus_M_contig1008.182.1 vs. uniprot
Match: A0A6A4Z9D8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z9D8_9STRA)

HSP 1 Score: 221 bits (564), Expect = 1.210e-67
Identity = 111/248 (44.76%), Postives = 160/248 (64.52%), Query Frame = 1
Query:    4 VDEEWFFIKKQGQRYYLGQGEELPTHRVQHKSHIKKVMFLAAVARPRRNTVANRNFDGKIGIFPFTRQVQAQRNSRHRAAGTWVTTMVEVTKEVYKAKMLEDVFPAIKAQWPGGP-GEVFVQQDNAPAHNIANDPDIVAAGTADGWNIKLLNQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVKRAFTEQESEALGRVWTTYQSVLEKIMLAKGDNDFKMPHLHKKTANRRGAPIPRALPC 744
            +DE+WF++ KQ +RYYL   E +PT + + K HI KVMFL AVARPR +    R +DG+IG++PF +   A R+S++R  G  VT    VT++VY++ +++ V PA++++WP     ++++QQDNA  H   NDP +VAAG   GW I L +QP  SPD N+LDLG+FN+IQSLQ +    T+D+L+  V ++F E E   L + + T Q V+E I    GDNDFK+PH  K    + G P+P  L C
Sbjct:   47 IDEKWFYVTKQNRRYYLWSDEAVPTRKCRSKKHITKVMFLTAVARPRYDARNKRMWDGRIGMWPFVKTRPALRSSKNRKRGDDVTEPFTVTRDVYRSFLIDKVIPAVRSKWPSSKKNQIWIQQDNAKPHVSVNDPAVVAAGRQGGWTISLCSQPAQSPDLNVLDLGYFNAIQSLQHQMATYTLDDLVVAVVKSFEELECTVLDKTFMTLQKVMECIFKMGGDNDFKLPHQKKHGLVKEG-PLPTRLEC 293          
BLAST of mRNA_F-serratus_M_contig1008.182.1 vs. uniprot
Match: UPI0007F012D1 (uncharacterized protein LOC108203813 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F012D1)

HSP 1 Score: 221 bits (562), Expect = 3.210e-67
Identity = 119/248 (47.98%), Postives = 160/248 (64.52%), Query Frame = 1
Query:    4 VDEEWFFIKKQGQRYYLGQGEELPTHRVQHKSHIKKVMFLAAVARPRRNTVANRNFDGKIGIFPFTRQVQAQRNSRHRAAGTWVTTMVE-VTKEVYKAKMLEDVFPAIKAQWPGGPGEVFVQQDNAPAHNIANDPDIVAAGTADGWNIKLLNQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVKRAFTEQESEALGRVWTTYQSVLEKIMLAKGDNDFKMPHLHKKTANRRGAPIPRALPC 744
            +DE+WF++ K   +YYL   E  PT RV+ K  I K MFLAAVARPR        F GKIGIFPFT    A+RNS++R AGT VT + E +TKE  K+ ++E V PAI A+WP G   + +QQDNA  H   N+ + + A + DG++I+L+ QPPNSPD N+LDLGFF SIQ LQ      T++EL+  VK++F E   E L RV+ T Q+ +++IM  KGDND+K+PH+ K    R G  +P  + C
Sbjct:  105 IDEKWFYMCKTTTKYYLVHDEPEPTRRVKSKRFITKAMFLAAVARPRNG------FSGKIGIFPFTFIEPAKRNSKNRVAGTMVTKVDESITKEKVKSCLIEKVIPAIHAKWPQGMRTIIIQQDNAKPHIDCNNAEFMQAASKDGFDIRLICQPPNSPDLNVLDLGFFRSIQDLQHEKAPTTIEELVAAVKQSFDEYPVEKLNRVFLTQQTCMKEIMKFKGDNDYKIPHMGKDRLEREGT-LPLQIRC 345          
BLAST of mRNA_F-serratus_M_contig1008.182.1 vs. uniprot
Match: UPI000B906F28 (uncharacterized protein LOC110892967 n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI000B906F28)

HSP 1 Score: 218 bits (555), Expect = 3.370e-67
Identity = 112/249 (44.98%), Postives = 164/249 (65.86%), Query Frame = 1
Query:    4 VDEEWFFIKKQGQRYYLGQGEELPTHRVQHKSHIKKVMFLAAVARPRRNTVANRNFDGKIGIFPFTRQVQAQRNSRHRAAGTWVTT-MVEVTKEVYKAKMLEDVFPAIKAQWPGG-PGEVFVQQDNAPAHNIANDPDIVAAGTADGWNIKLLNQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVKRAFTEQESEALGRVWTTYQSVLEKIMLAKGDNDFKMPHLHKKTANRRGAPIPRALPC 744
            +DE+WF++ K  +RYYL  GE+ P    + K  I KVMFLAAVARPR +T  N  F GKIGIFPFT+   A+R+S++R AGT  T  ++ V KEV ++ +++ V PAI+ +WP G  G +F+QQDNA  HN  +D   +   + DG++I+L  QPPNSPD N+LDLGFF++IQSLQ++  L ++DEL+  V+ +F +  S  L  V+ T Q+ +++IM   G N ++ PH+ K    R+G  +P  + C
Sbjct:   20 IDEKWFYLSKPSKRYYLLPGEDEPLRTCKSKKFITKVMFLAAVARPRFDTSGNERFSGKIGIFPFTKLEPAKRSSKNRVAGTLETKPILSVIKEVTRSWLIDKVLPAIRDKWPQGHTGPIFIQQDNAKPHNNIDDEQFIQEASRDGFDIRLRFQPPNSPDLNVLDLGFFHAIQSLQEQEVLGSIDELVHAVQTSFEKLSSHELNNVFLTLQACMKEIMKVHGSNHYQTPHIGKGKLERQGK-LPLQIEC 267          
BLAST of mRNA_F-serratus_M_contig1008.182.1 vs. uniprot
Match: A0A485LD71_9STRA (Aste57867_19703 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LD71_9STRA)

HSP 1 Score: 217 bits (553), Expect = 2.110e-66
Identity = 111/240 (46.25%), Postives = 154/240 (64.17%), Query Frame = 1
Query:    4 VDEEWFFIKKQGQRYYLGQGEELPTHRVQHKSHIKKVMFLAAVARPRRNTVANRNFDGKIGIFPFTRQVQAQRNSRHRAAGTWVTTMVEVTKEVYKAKMLEDVFPAIKAQWPGGPGE-VFVQQDNAPAHNIANDPDIVAAGTADGWNIKLLNQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVKRAFTEQESEALGRVWTTYQSVLEKIMLAKGDNDFKMPHLHKKTANRRGA 720
            +DE+WFF+ +  +RYYL   EELP  +   K HI KVMFL AVARPR +   +R +DGKIG +PF     AQR S++R  G  +T  + VTK+VY+  +++ V PAIK+QWPG     +++QQDNA  H   +D  + +AG  DGW+IKL  QP  SPD N+LDLGFFN+IQSLQ R+   T+DEL+  V +AF E E   L + + T Q V+E+ +   G+N + +PH+ K    R G+
Sbjct:    7 IDEKWFFLTQINRRYYLWPDEELPVRKCNSKRHIVKVMFLTAVARPRWDFKRHRMWDGKIGTWPFIEHTVAQRRSKNRDKGAPITKPLNVTKKVYRQYLIDKVIPAIKSQWPGQHRHTIYLQQDNAKPHVAVSDSAVCSAGHEDGWDIKLTAQPAMSPDFNVLDLGFFNAIQSLQHRSLTQTIDELVVAVHKAFNELEWRVLDKTFMTLQKVMEESLKQNGNNAYLLPHIQKDKLAREGS 246          
BLAST of mRNA_F-serratus_M_contig1008.182.1 vs. uniprot
Match: A0A6P6X993_COFAR (uncharacterized protein LOC113741020 n=2 Tax=Coffea TaxID=13442 RepID=A0A6P6X993_COFAR)

HSP 1 Score: 216 bits (549), Expect = 1.030e-65
Identity = 114/250 (45.60%), Postives = 167/250 (66.80%), Query Frame = 1
Query:    4 VDEEWFFIKKQGQRYYLGQGEELPTHRVQHKSHIKKVMFLAAVARPRRNTVANRNFDGKIGIFPFTRQVQAQRNSRHRAAGTWVTT-MVEVTKEVYKAKMLEDVFPAIKAQWPGGP--GEVFVQQDNAPAHNIANDPDIVAAGTADGWNIKLLNQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVKRAFTEQESEALGRVWTTYQSVLEKIMLAKGDNDFKMPHLHKKTANRRGAPIPRALPC 744
            +DE+WF++ K+ ++YYL   EE P    + K  I KVMFLAAVARPR +   N++FDGKIGIFPF  +  A+RNS++R AGT  T  ++ VTKEVY+  ++++V PAI+A+WP       +F+QQDNA  H    D + + A T +G++I+L  QPPNSPD N+LDLG+F +IQSLQ +   N++DELI  V+++F E  SE+L  V+ T Q  + ++M   G N++K+PH+ K+   R G  +P  + C
Sbjct:   64 IDEKWFYMTKESEKYYLHPEEEHPMRTCRSKKFIVKVMFLAAVARPRFDCSRNKHFDGKIGIFPFAFKEPAKRNSKNRVAGTLETKPILSVTKEVYRRCLIDNVLPAIRAKWPQSDVISPIFIQQDNAKPHIDPMDVEFIEAATREGFDIRLSFQPPNSPDMNVLDLGYFRAIQSLQHQEAPNSIDELISAVEKSFDELSSESLNNVFLTLQLCMLEVMKNCGGNNYKVPHIGKQRLIRDGN-LPLQIGC 312          
BLAST of mRNA_F-serratus_M_contig1008.182.1 vs. uniprot
Match: A0A6P6VBP7_COFAR (uncharacterized protein LOC113715216 n=4 Tax=Coffea TaxID=13442 RepID=A0A6P6VBP7_COFAR)

HSP 1 Score: 216 bits (549), Expect = 1.690e-65
Identity = 114/250 (45.60%), Postives = 167/250 (66.80%), Query Frame = 1
Query:    4 VDEEWFFIKKQGQRYYLGQGEELPTHRVQHKSHIKKVMFLAAVARPRRNTVANRNFDGKIGIFPFTRQVQAQRNSRHRAAGTWVTT-MVEVTKEVYKAKMLEDVFPAIKAQWPGGP--GEVFVQQDNAPAHNIANDPDIVAAGTADGWNIKLLNQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVKRAFTEQESEALGRVWTTYQSVLEKIMLAKGDNDFKMPHLHKKTANRRGAPIPRALPC 744
            +DE+WF++ K+ ++YYL   EE P    + K  I KVMFLAAVARPR +   N++FDGKIGIFPF  +  A+RNS++R AGT  T  ++ VTKEVY+  ++++V PAI+A+WP       +F+QQDNA  H    D + + A T +G++I+L  QPPNSPD N+LDLG+F +IQSLQ +   N++DELI  V+++F E  SE+L  V+ T Q  + ++M   G N++K+PH+ K+   R G  +P  + C
Sbjct:   81 IDEKWFYMTKESEKYYLHPEEEHPMRTCRSKKFIVKVMFLAAVARPRFDCSRNKHFDGKIGIFPFAFKEPAKRNSKNRVAGTLETKPILSVTKEVYRRCLIDNVLPAIRAKWPQSDVISPIFIQQDNAKPHIDPMDVEFIEAATREGFDIRLSFQPPNSPDMNVLDLGYFRAIQSLQHQEAPNSIDELISAVEKSFDELSSESLNNVFLTLQLCMLEVMKNCGGNNYKVPHIGKQRLIRDGN-LPLQIGC 329          
BLAST of mRNA_F-serratus_M_contig1008.182.1 vs. uniprot
Match: UPI000CD873B3 (uncharacterized protein LOC111883545 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD873B3)

HSP 1 Score: 218 bits (556), Expect = 1.750e-65
Identity = 114/249 (45.78%), Postives = 165/249 (66.27%), Query Frame = 1
Query:    4 VDEEWFFIKKQGQRYYLGQGEELPTHRVQHKSHIKKVMFLAAVARPRRNTVANRNFDGKIGIFPFTRQVQAQRNSRHRAAGTWVTT-MVEVTKEVYKAKMLEDVFPAIKAQWPGGP-GEVFVQQDNAPAHNIANDPDIVAAGTADGWNIKLLNQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVKRAFTEQESEALGRVWTTYQSVLEKIMLAKGDNDFKMPHLHKKTANRRGAPIPRALPC 744
            +DE+WF++ K  +RYYL  GE+ P    Q K  I KVMFLAAVARPR +   N  F GKIGI+PFTR   A+R+S++R AGT  T  ++ VTKEV ++ ++E V P I+A+WP    G +F+QQDNA  H   ND + + A + DG++I+L  QP NSPD N+LDLGFF +IQSLQ++  L T+DEL+  V+ AF + +S+ L  V+ T Q+ + +I+  +G N++++PH+ K    R G  +P  + C
Sbjct:  173 IDEKWFYMSKPSRRYYLVPGEDEPLRTCQSKKFITKVMFLAAVARPRFDASGNEVFSGKIGIYPFTRLEPAKRSSKNRVAGTLETKPILSVTKEVTRSWLIEKVLPDIRAKWPRSHVGPIFIQQDNAKPHIDVNDNEFLEAASQDGFDIRLNFQPSNSPDLNVLDLGFFRAIQSLQEQEALGTIDELVHAVQTAFEKMQSQQLNNVFLTLQTCMREIIKVQGGNNYQIPHIGKNRLEREGN-LPLRIGC 420          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1008.182.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JGY9_9PHAE7.240e-7662.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KWV2_9PHAE6.380e-7261.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6A5AA16_9STRA3.650e-6848.28Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A6A4Z9D8_9STRA1.210e-6744.76Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
UPI0007F012D13.210e-6747.98uncharacterized protein LOC108203813 n=1 Tax=Daucu... [more]
UPI000B906F283.370e-6744.98uncharacterized protein LOC110892967 n=1 Tax=Helia... [more]
A0A485LD71_9STRA2.110e-6646.25Aste57867_19703 protein n=2 Tax=Aphanomyces stella... [more]
A0A6P6X993_COFAR1.030e-6545.60uncharacterized protein LOC113741020 n=2 Tax=Coffe... [more]
A0A6P6VBP7_COFAR1.690e-6545.60uncharacterized protein LOC113715216 n=4 Tax=Coffe... [more]
UPI000CD873B31.750e-6545.78uncharacterized protein LOC111883545 n=1 Tax=Lactu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1008contigF-serratus_M_contig1008:304024..304767 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score214.5
Seed ortholog evalue5.4e-53
Seed eggNOG ortholog157072.XP_008866696.1
Hectar predicted targeting categoryother localisation
EggNOG OGs2CMKC@1,2QQNW@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size744
Cds size744
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928803.5285366-CDS-F-serratus_M_contig1008:304023..3047671622928803.5285366-CDS-F-serratus_M_contig1008:304023..304767Fucus serratus maleCDSF-serratus_M_contig1008 304024..304767 +
1690962579.605756-CDS-F-serratus_M_contig1008:304023..3047671690962579.605756-CDS-F-serratus_M_contig1008:304023..304767Fucus serratus maleCDSF-serratus_M_contig1008 304024..304767 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1008.182.1prot_F-serratus_M_contig1008.182.1Fucus serratus malepolypeptideF-serratus_M_contig1008 304024..304767 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1008.182.1

>prot_F-serratus_M_contig1008.182.1 ID=prot_F-serratus_M_contig1008.182.1|Name=mRNA_F-serratus_M_contig1008.182.1|organism=Fucus serratus male|type=polypeptide|length=248bp
MVDEEWFFIKKQGQRYYLGQGEELPTHRVQHKSHIKKVMFLAAVARPRRN
TVANRNFDGKIGIFPFTRQVQAQRNSRHRAAGTWVTTMVEVTKEVYKAKM
LEDVFPAIKAQWPGGPGEVFVQQDNAPAHNIANDPDIVAAGTADGWNIKL
LNQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVKRAFTEQESE
ALGRVWTTYQSVLEKIMLAKGDNDFKMPHLHKKTANRRGAPIPRALPC
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mRNA from alignment at F-serratus_M_contig1008:304024..304767+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1008.182.1 ID=mRNA_F-serratus_M_contig1008.182.1|Name=mRNA_F-serratus_M_contig1008.182.1|organism=Fucus serratus male|type=mRNA|length=744bp|location=Sequence derived from alignment at F-serratus_M_contig1008:304024..304767+ (Fucus serratus male)
ATGGTGGACGAGGAATGGTTCTTTATCAAGAAACAGGGCCAGAGGTACTA CCTGGGGCAAGGTGAGGAACTACCCACGCACAGAGTTCAGCACAAGTCCC ACATCAAGAAGGTCATGTTCCTGGCAGCTGTGGCGCGACCGCGTAGAAAC ACTGTGGCGAACCGCAACTTTGACGGCAAGATCGGCATCTTCCCGTTCAC CAGGCAAGTGCAGGCCCAACGAAACAGCAGGCACAGGGCTGCGGGTACGT GGGTGACAACGATGGTGGAGGTCACGAAGGAGGTTTACAAGGCGAAGATG CTGGAGGATGTCTTCCCTGCCATCAAGGCTCAGTGGCCAGGAGGGCCCGG AGAAGTATTCGTCCAGCAGGACAACGCTCCGGCACACAACATCGCTAACG ACCCGGACATTGTGGCGGCGGGTACTGCTGACGGTTGGAACATCAAGCTG TTGAACCAGCCGCCCAACAGCCCTGACACTAACATCCTGGACTTGGGGTT TTTCAACTCAATTCAGTCCCTCCAGGATCGGACTACGCTCAACACGGTGG ACGAGCTCATCGAGGAGGTAAAGAGGGCTTTCACCGAGCAGGAGTCTGAA GCCCTTGGCAGGGTTTGGACGACCTACCAGTCCGTCCTGGAGAAAATCAT GCTGGCGAAAGGCGACAACGACTTCAAGATGCCCCACCTGCACAAGAAGA CGGCGAACCGTCGCGGTGCGCCGATTCCGCGTGCCTTGCCGTGC
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Coding sequence (CDS) from alignment at F-serratus_M_contig1008:304024..304767+

>mRNA_F-serratus_M_contig1008.182.1 ID=mRNA_F-serratus_M_contig1008.182.1|Name=mRNA_F-serratus_M_contig1008.182.1|organism=Fucus serratus male|type=CDS|length=1488bp|location=Sequence derived from alignment at F-serratus_M_contig1008:304024..304767+ (Fucus serratus male)
ATGGTGGACGAGGAATGGTTCTTTATCAAGAAACAGGGCCAGAGGTACTA
CCTGGGGCAAGGTGAGGAACTACCCACGCACAGAGTTCAGCACAAGTCCC
ACATCAAGAAGGTCATGTTCCTGGCAGCTGTGGCGCGACCGCGTAGAAAC
ACTGTGGCGAACCGCAACTTTGACGGCAAGATCGGCATCTTCCCGTTCAC
CAGGCAAGTGCAGGCCCAACGAAACAGCAGGCACAGGGCTGCGGGTACGT
GGGTGACAACGATGGTGGAGGTCACGAAGGAGGTTTACAAGGCGAAGATG
CTGGAGGATGTCTTCCCTGCCATCAAGGCTCAGTGGCCAGGAGGGCCCGG
AGAAGTATTCGTCCAGCAGGACAACGCTCCGGCACACAACATCGCTAACG
ACCCGGACATTGTGGCGGCGGGTACTGCTGACGGTTGGAACATCAAGCTG
TTGAACCAGCCGCCCAACAGCCCTGACACTAACATCCTGGACTTGGGGTT
TTTCAACTCAATTCAGTCCCTCCAGGATCGGACTACGCTCAACACGGTGG
ACGAGCTCATCGAGGAGGTAAAGAGGGCTTTCACCGAGCAGGAGTCTGAA
GCCCTTGGCAGGGTTTGGACGACCTACCAGTCCGTCCTGGAGAAAATCAT
GCTGGCGAAAGGCGACAACGACTTCAAGATGCCCCACCTGCACAAGAAGA
CGGCGAACCGTCGCGGTGCGCCGATTCCGCGTGCCTTGCCGTGCATGGTG
GACGAGGAATGGTTCTTTATCAAGAAACAGGGCCAGAGGTACTACCTGGG
GCAAGGTGAGGAACTACCCACGCACAGAGTTCAGCACAAGTCCCACATCA
AGAAGGTCATGTTCCTGGCAGCTGTGGCGCGACCGCGTAGAAACACTGTG
GCGAACCGCAACTTTGACGGCAAGATCGGCATCTTCCCGTTCACCAGGCA
AGTGCAGGCCCAACGAAACAGCAGGCACAGGGCTGCGGGTACGTGGGTGA
CAACGATGGTGGAGGTCACGAAGGAGGTTTACAAGGCGAAGATGCTGGAG
GATGTCTTCCCTGCCATCAAGGCTCAGTGGCCAGGAGGGCCCGGAGAAGT
ATTCGTCCAGCAGGACAACGCTCCGGCACACAACATCGCTAACGACCCGG
ACATTGTGGCGGCGGGTACTGCTGACGGTTGGAACATCAAGCTGTTGAAC
CAGCCGCCCAACAGCCCTGACACTAACATCCTGGACTTGGGGTTTTTCAA
CTCAATTCAGTCCCTCCAGGATCGGACTACGCTCAACACGGTGGACGAGC
TCATCGAGGAGGTAAAGAGGGCTTTCACCGAGCAGGAGTCTGAAGCCCTT
GGCAGGGTTTGGACGACCTACCAGTCCGTCCTGGAGAAAATCATGCTGGC
GAAAGGCGACAACGACTTCAAGATGCCCCACCTGCACAAGAAGACGGCGA
ACCGTCGCGGTGCGCCGATTCCGCGTGCCTTGCCGTGC
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