mRNA_F-serratus_M_contig70.18185.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig70.18185.1
Unique NamemRNA_F-serratus_M_contig70.18185.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig70.18185.1 vs. uniprot
Match: A0A6H5JV04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV04_9PHAE)

HSP 1 Score: 356 bits (914), Expect = 1.180e-111
Identity = 210/438 (47.95%), Postives = 280/438 (63.93%), Query Frame = 2
Query:  278 LPFAARHFFPVGRVQLRETVRQLYSDGRKTPWEANKRPGKAWVQDFLKRHPRVSGLITRIYGTNRITENEEPCIRRFYEVWGEYVKTEDPKADHLHNTDETDTTTLSTKTEKAFAEAGQKVVGSMRSNSREN---VTSLWSPPSAMAP----RGSQLSSSRGSVCKRIGRRRRTDHRVRGTPRRTLRSCSTVFVNYLNDFHKQHGERGLLDGKPNVLVLDGHASHVCYDVIKLDIELDIVLFQLPSHTSHITQPLNI----APKRR*SKCSRPTHSNTEGRCR*SAT*PA*SGGLGERSFSPHQNKASFAGAGLWPADMDRAMVPLQGTGKRKPRPTDRPLLADVPIAASQKQLEEDLGKRALRRLRAGGHSIEGPRVGTVMLGGILRQRKRAKKLLTTRAAAGVPDGGILTSKEILDAYAERERANKAAEEAKAEKA 1558
            L +A R+   V R+ L ETVR L  D RKTPW+  K PGK W+  FL+RHPRV    TRIY  NR+T+  EP I  FY  W   ++   P+ADH+HNTDET TT    KT KA+ +AGQKVV S+R+NSREN   VT++ +  S  AP    +G +L        ++ G     D R   T    ++    VF+ YL DFH+Q  +RGL+DGKP++L+LDGHASHV  +VI+L +EL+IVLFQLPSHTSHITQPL++    A KR  +K     +  + G        P         +F+  +N++SFAGAGLWP +M+RAM  L+GT KR    T RP L DVPIA   +QLE+D+G+R +R+L+A GH   G RV TVMLG ++RQRKRAKK+ T+R + G+PDGG +T+++ L   AE+ERA+K   +AKAE+A
Sbjct:   70 LLYAGRNCLAVSRLHLLETVRLLCLD-RKTPWDPEKGPGKDWLAGFLERHPRVRERTTRIYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPD--WFAEKNGP---PDARYTCTDSSFMQG--NVFIKYLKDFHQQLCKRGLIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRLRGTAKRNENQTGRPPLKDVPIAVGNEQLEQDIGERGMRQLKAAGHLTTGLRVSTVMLGSVIRQRKRAKKMATSRGSLGLPDGGNITAEDFLAKVAEKERADKEESDAKAERA 499          
BLAST of mRNA_F-serratus_M_contig70.18185.1 vs. uniprot
Match: B2KWI5_ECTSI (Transposase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=B2KWI5_ECTSI)

HSP 1 Score: 350 bits (897), Expect = 8.960e-109
Identity = 219/483 (45.34%), Postives = 294/483 (60.87%), Query Frame = 2
Query:  278 LPFAARHFFPVGRVQLRETVRQLYSDGRKTPWEANKRPGKAWVQDFLKRHPRVSGLITRIYGTNRITENEEPCIRRFYEVWGEYVKTEDPKADHLHNTDETDTTTLSTKTEKAFAEAGQKVVGSMRSNSRENVT---SLWSPPSAMAP----RGSQLSSSRGSVCKRIGRRRRTDHRVRGTPRRTLRSCSTVFVNYLNDFHKQHGERGLLDGKPNVLVLDGHASHVCYDVIKLDIELDIVLFQLPSHTSHITQPLNIAP----KRR*SKCSRPTHSNTEGRCR*SAT*PA*S---GGLGE---RSFSPHQNKASFAGAGLWPADMDRAMVPLQGTGKRKPRPTDRPLLADVPIAASQKQLEEDLGKRALRRLRAGGHSIEGPRVGTVMLGGILRQRKRAKKLLTTRAAAGVPDGGILTSKEILDAYAERERANKAAEEAKAEKAXXREQKRADKETASLAWQASRRGRGEASGVRLGCERIEG 1675
            L +AARHF  + R  L+E VRQL +DGR  PW+A   PG++W+  F KRHP +S    RIY  NRI  ++E  ++ FY+ +GE+V  E   ADHL NTDET +T+  TKT KA AE+GQKVVG+MRSNSRE VT   ++ +  + +AP    +G +L +         GR    + R+  T    ++   TVFVNY+ DFH+Q  +RGL++G P+VLVLDGHASHV Y+VIKL  +L+IVL+Q+PSH+SH+ QPL++      KR  +K      +   GR       PA S   G LG+   RSFS  QN +SFAGAGLWP D +RAM  LQG GKRK R   RP + D+ +A S K L ++LG R +R L+  G  ++G  + TVMLG  ++ +K+ KKL  TR + G+P+GG +T  +++  Y E ER    AEEA  EK   RE KRA +E ASL   A+R GRG            EG
Sbjct:   71 LLYAARHFIGIDRTALQEHVRQLCNDGRDIPWDAAVGPGRSWLDGFFKRHPALSERSARIYEANRIMSDDETRLQTFYKDFGEFVDKEKIPADHLWNTDETGSTSQGTKTMKAIAESGQKVVGAMRSNSRETVTVVVTISAAGATLAPWIIYKGQRLQADWVK-----GRNGPPNARLAVTDSSFMQG--TVFVNYIRDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVIKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKREITKVLSAFPARNGGRV------PAKSDMLGILGDAWLRSFSEQQNISSFAGAGLWPVDGERAMGRLQGVGKRKERSGARPPVEDITVAISDKNLADNLGPRTVRELQQKGQCVKGILINTVMLGAFVKAKKKQKKLAITRKSQGLPEGGAITCDDVMHKYLEDERQKVEAEEALKEKKMAREIKRAAREAASLKQGANRAGRGHXXXXXXXXXXXEG 540          
BLAST of mRNA_F-serratus_M_contig70.18185.1 vs. uniprot
Match: A0A6H5JJ12_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ12_9PHAE)

HSP 1 Score: 354 bits (908), Expect = 3.030e-108
Identity = 209/438 (47.72%), Postives = 279/438 (63.70%), Query Frame = 2
Query:  278 LPFAARHFFPVGRVQLRETVRQLYSDGRKTPWEANKRPGKAWVQDFLKRHPRVSGLITRIYGTNRITENEEPCIRRFYEVWGEYVKTEDPKADHLHNTDETDTTTLSTKTEKAFAEAGQKVVGSMRSNSREN---VTSLWSPPSAMAP----RGSQLSSSRGSVCKRIGRRRRTDHRVRGTPRRTLRSCSTVFVNYLNDFHKQHGERGLLDGKPNVLVLDGHASHVCYDVIKLDIELDIVLFQLPSHTSHITQPLNI----APKRR*SKCSRPTHSNTEGRCR*SAT*PA*SGGLGERSFSPHQNKASFAGAGLWPADMDRAMVPLQGTGKRKPRPTDRPLLADVPIAASQKQLEEDLGKRALRRLRAGGHSIEGPRVGTVMLGGILRQRKRAKKLLTTRAAAGVPDGGILTSKEILDAYAERERANKAAEEAKAEKA 1558
            L +A R+   V R+ L ETVR L  D RKTPW+  K PGK W+  FL+RHPRV    TRIY  NR+T+  EP I  FY  W   ++   P+ADH+HNTDET TT    KT KA+ +AGQKVV S+R+NSREN   VT++ +  S  AP    +G +L        ++ G     D R   T    ++    VF+ YL DFH+Q  +RGL+DGKP++L+LDGHASHV  +VI+L +EL+IVLFQLPSHTSHITQPL++    A KR  +K     +  + G        P         +F+  +N++SFAGAGLWP +M+RAM  L+GT KR    T RP L DVPIA   +QLE+D+G+R +R+L+A GH   G RV TVMLG ++RQRKRAKK+ T+R + G+PDG  +T+++ L   AE+ERA+K   +AKAE+A
Sbjct:  311 LLYAGRNCLAVSRLHLLETVRLLCLD-RKTPWDPEKGPGKDWLAGFLERHPRVRERTTRIYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPD--WFAEKNGP---PDARYTCTDSSFMQG--NVFIKYLKDFHQQLCKRGLIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRLRGTAKRNENQTGRPPLKDVPIAVGNEQLEQDIGERGMRQLKAAGHLTTGLRVSTVMLGSVIRQRKRAKKMATSRGSLGLPDGANITAEDFLAKVAEKERADKEESDAKAERA 740          
BLAST of mRNA_F-serratus_M_contig70.18185.1 vs. uniprot
Match: A0A6H5L2E0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E0_9PHAE)

HSP 1 Score: 336 bits (861), Expect = 6.260e-106
Identity = 205/459 (44.66%), Postives = 277/459 (60.35%), Query Frame = 2
Query:  278 LPFAARHFFPVGRVQLRETVRQLYSDGRKTPWEANKRPGKAWVQDFLKRHPRVSGLITRIYGTNRITENEEPCIRRFYEVWGEYVKTEDPKADHLHNTDETDTTTLSTKTEKAFAEAGQKVVGSMRSNSRENVTS-LWSPPSAMAPRGSQLSSSRGSVCKRIGRRRRTD-HRVRGTPRRTLRSCS-------TVFVNYLNDFHKQHGERGLLDGKPNVLVLDGHASHVCYDVIKLDIELDIVLFQLPSHTSHITQPLNIAP----KRR*SKCSRPTHSNTEGRCR*SAT*PA*SGGLGERSFSPHQNKASFAGAGLWPADMDRAMVPLQGTGKRKPRPTDRPLLADVPIAASQKQLEEDLGKRALRRLRAGGHSIEGPRVGTVMLGGILRQRKRAKKLLTTRAAAGVPDGGILTSKEILDAYAERERANKAAEEAKAEKAXXREQKRADKETASLAWQA 1615
            L FAAR+F  V RV LR+ VR+L +DGR+  W+ ++ PGK W+  FL+RHPRV+   TRIY  NR+TE+EEP + +F+E W   +    P A+H+HNTDET                     G  R  +  NV + + +    +AP           + K  G+R +TD    R  P     +C+        VF+ YL DFHKQ G+RGLLDGKP++L+LDGHASHV  +V KL + L I+ FQLPSHTSHITQPL++      K+  ++     + N+ G        P       + SF+P  NK+SFAGAGLWP + +RA+  L+GT  +K R  +RP L DVPIAA  +QLE D+G+RALR L+  GH++ G R GTV+L G+L QRK AKK+ T+R + G+PDGG +T+ E LDA AE+ERA+KA  +AKA +A  RE+KRA K  A L  QA
Sbjct:   49 LLFAARNFLAVDRVHLRDAVRRLCNDGRRIIWDPDEGPGKDWLAGFLRRHPRVAERSTRIYEANRMTEDEEPRMVQFHERWAALLDEVKPAANHVHNTDET--------------------AGCSREPAATNVVANISADDHTLAPT---------IIFK--GQRLQTDWFAERNGPEGARYTCTGSSFMQGDVFIAYLKDFHKQLGDRGLLDGKPHILLLDGHASHVSVEVSKLAMNLKIISFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGSLPLKRDMPGVIADAWKLSFAPEINKSSFAGAGLWPVNKERALGQLKGTANKKERRDERPPLQDVPIAALNEQLEIDIGERALRVLKGQGHTVTGIREGTVLLDGLLTQRKHAKKMATSRGSLGLPDGGNITAPEFLDAVAEKERADKAESDAKAARAKVREEKRATKAAAELLRQA 476          
BLAST of mRNA_F-serratus_M_contig70.18185.1 vs. uniprot
Match: A0A6H5KHG4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG4_9PHAE)

HSP 1 Score: 323 bits (828), Expect = 3.680e-101
Identity = 200/430 (46.51%), Postives = 251/430 (58.37%), Query Frame = 2
Query:  278 LPFAARHFFPVGRVQLRETVRQLYSDGRKTPWEANKRPGKAWVQDFLKRHPRVSGLITRIYGTNRITENEEPCIRRFYEVWGEYVKTEDPKADHLHNTDETDTTTLSTKTEKAFAEAGQKVVGSMRSNSRENVTSL---------WSPPSAMAPRGSQLSSSRGSVCKRIGRRRRTDHRVRGTPRRTLRSCSTVFVNYLNDFHKQHGERGLLDGKPNVLVLDGHASHVCYDVIKLDIELDIVLFQLPSHTSHITQPLNIAP----KRR*SKCSRPTHSNTEGRCR*SAT*PA*SGGLGERSFSPHQNKASFAGAGLWPADMDRAMVPLQGTGKRKPRPTDRPLLADVPIAASQKQLEEDLGKRALRRLRAGGHSIEGPRVGTVMLGGILRQRKRAKKLLTTRAAAGVPDGGILTSKEILDAYAERERANK 1528
            L +A RH   VGR+ L ET RQL +DGR   W+  KRPGK W+  FLKRHPRVS   TRIY +NRITE++EP    +Y+ W        P+ADH+HNTDET TT   TKT KAFAE GQKVV SMRSNSREN T +         W+P      +  QL        +R G +   D R   T    ++    VF+ YL DF+KQ  +RG+LDGKP++LVL GHAS V Y+VIKL +EL+I+LFQLPSHTSHITQPL++      K+  +K  +  +    G        P+      +RSF+P +NKASF GAGLWP                                     LEE +G+R LR+L+AGG +I G +VGTVMLGG+L QRKRAKKL T+R + G+PDGG + S+E L A   RERA K
Sbjct:    8 LLYAGRHCLAVGRLHLLETDRQLCNDGRSITWDPGKRPGKDWLAGFLKRHPRVSERTTRIYESNRITEDKEPRNVEYYKKWAALFDEHKPEADHVHNTDETGTTPQGTKTMKAFAEVGQKVVESMRSNSRENATVVTTISTNGVTWAPTIIFKGQRLQLD----WFAERNGPK---DARYTCTDSSFMQG--DVFIKYLKDFYKQLDDRGVLDGKPHILVLGGHASLVSYEVIKLAMELNIILFQLPSHTSHITQPLDVVAFGTFKKEVTKVLQDYYHANGGSLPLKRDVPSVIAAAWQRSFTPERNKASFGGAGLWP-------------------------------------LEEAIGERVLRQLKAGGQTITGLKVGTVMLGGLLTQRKRAKKLTTSRGSLGLPDGGNINSEEFL-AKVNRERARK 390          
BLAST of mRNA_F-serratus_M_contig70.18185.1 vs. uniprot
Match: A0A6H5JGP6_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGP6_9PHAE)

HSP 1 Score: 323 bits (828), Expect = 9.370e-100
Identity = 214/534 (40.07%), Postives = 291/534 (54.49%), Query Frame = 2
Query:  278 LPFAARHFFPVGRVQLRETVRQLYSDGRKTPWEANKRPGKAWVQDFLKRHPRVSGLITRIYGTNRITENEEPCIRRFYEVWGEYVKTEDPKADHLHNTDETDTTTLSTKTEKAFAEAGQKVVGSMRSNSRENVT---SLWSPPSAMAP----RGSQLSSSRGSVCKRIGRRRRTDHRVRGTPRRTLRSCSTVFVNYLNDFHKQHGERGLLDGKPNVLVLDGHASHVCYDVIKLDIELDIVLFQLPSHTSHITQPLNIAP----KRR*SKCSRPTHSNTEGRC---------------------------------------------------R*SAT*PA*S---GGLGE---RSFSPHQNKASFAGAGLWPADMDRAMVPLQGTGKRKPRPTDRPLLADVPIAASQKQLEEDLGKRALRRLRAGGHSIEGPRVGTVMLGGILRQRKRAKKLLTTRAAAGVPDGGILTSKEILDAYAERERANKAAEEAKAEKAXXREQKRADKETASLAWQASRRGRGEASGVRLGCERIEG 1675
            L +AARHF  + R  L+E VRQL +DGR  PW+A   PG++W+  F KRHP +S    RIY  NRI  ++E  ++ FY+ +GE+V  E   ADHL NTDET +T   TKT K  AE+GQKVVG++ S SRENVT   ++ +  + +AP    +G +L +         GR    + R+  T    ++    VFVNY+ DFH+Q  +RGL++G P+VLVLDGHASHV Y+V+KL  +L+IVL+Q+PSH+SH+ QPL++      KR   K      +   GR                                                    R   T PA S   G LG+   RSFS  QN +SFAGAGLWP D +RAM  LQG GKRK R   RP + D+ +A S K L ++LG R +R L+  G  ++G  + TVM+G  ++ +K+ KKL  TR + G+P+GG++T  +++  Y   ER    AEEA  EK   RE KRA +E ASL   A+R GRG            EG
Sbjct:   30 LLYAARHFIGIDRAALQEHVRQLCNDGRDIPWDAAVGPGRSWLDGFFKRHPALSECSARIYEANRIMSDDETRLQTFYKDFGEFVDKEKIPADHLWNTDETGSTPQGTKTMKVIAESGQKVVGAIHSKSRENVTVVVTISTVGATLAPWIIYKGQRLQADWAK-----GRNAPPNARLAVTNSSFMQGI--VFVNYIRDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVVKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKREIPKVLSAFQARNGGRVPAKSDMLGLLGDAWLRSFSEEQNISSFAGAGLWLVDGERAMGQLQGWRFPTRILPTVPAKSDMLGILGDAWLRSFSEEQNISSFAGAGLWPVDGERAMGRLQGVGKRKERSGARPPVEDITVAISDKDLADNLGPRTVRELQQKGQCVKGILINTVMVGAFVKAKKKQKKLAITRKSQGLPEGGVITCDDVMQKYLADERQKVEAEEALKEKRLAREIKRAAREDASLEQGANRAGRGHXXXXXXXXXXXEG 556          
BLAST of mRNA_F-serratus_M_contig70.18185.1 vs. uniprot
Match: A0A6H5JK80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK80_9PHAE)

HSP 1 Score: 324 bits (831), Expect = 1.090e-99
Identity = 209/491 (42.57%), Postives = 290/491 (59.06%), Query Frame = 2
Query:  278 LPFAARHFFPVGRVQLRETVRQLYSDGRKTPWEANKRPGKAWVQDFLKRHPRVSGLITRIYGTNRITENEEPCIRRFYEVWGEYVKTED-PKADHLHNTDETD-------TTTLSTKTEKAFAEAGQKVVGSMRSNSRENVT---SLWSPPSAMAP----RGSQLSSSRGSVCKRIGRRRRTDHRVRGTPRRTLRSCSTVFVNYLNDFHKQHGERGLLDGKPNVLVLDGHASHVCYDVIKLDIELDIVLFQLPSHTSHITQPLNIAP----KRR*SKCSRPTHSNTEGRCR*SAT*PA*S---GGLGE---RSFSPHQNKASFAGAGLWPADMDRAMVPLQGTGKRKPRPTDRPLLADVPIAASQKQLEEDLGKRALRRLRAGGHSIEGPRVGTVMLGGILRQRKRAKKLLTTRAAAGVPDGGILTSKEILDAYAERERANKAAEEAKAEKAXXREQKRADKETASLAWQASRRGRGEASGVRLGCERIEG 1675
            L +AARHF  + R  L+E VRQL +DGR   W+A   PG++W+  F KRHP +S    RIY  NRI  ++E C++ FY+ +GE+V  E+ P        + TD       +T   TKT K  AE+GQKVVG+MRSNSR+NVT   ++ +  + +AP    +G ++ +         GR    + R+  T    ++   TVFVNY+ DFH+Q  +RGL++G P+VLVLDGHASHV Y+V+KL  +L+IVL+Q+PSH+SH+ QPL++      K   +K      +   GR       PA S   G LG+   RSFS  QN +SFAGAGLWP D +RAM  LQG GKRK R   RP + D+ +A S K L ++LG R +R L+  G  ++G  + TVMLG  ++ +K+ KKL  TR + G+P+GG++T  +++  Y E ER    AEEA  EK+  RE KRA +E ASL   A+R GRG            EG
Sbjct:   71 LLYAARHFIGIDRTALQEHVRQLCNDGRDISWDAAVGPGRSWLDGFFKRHPALSERSARIYEANRIMSDDETCLQTFYKDFGEFVDKENIPTCGTQMRQEYTDLERAVPGSTPQGTKTMKVIAESGQKVVGAMRSNSRDNVTVVVTISAAGATLAPWIIYKGQRMQADWVK-----GRNGPPNARLAVTDSSFMQG--TVFVNYIRDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVVKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKWEITKVLSAFPARNGGRV------PAKSDMLGILGDAWLRSFSEEQNISSFAGAGLWPVDGERAMGRLQGVGKRKERSGARPPVEDITVAISDKDLADNLGPRTVRELQQKGQCVKGILINTVMLGAFVKAKKKQKKLAITRKSQGLPEGGVITCDDVMPKYLEDERQKVEAEEALKEKSMAREIKRAAREDASLEQGANRAGRGHXXXXXXXXXXXEG 548          
BLAST of mRNA_F-serratus_M_contig70.18185.1 vs. uniprot
Match: A0A6H5JE68_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE68_9PHAE)

HSP 1 Score: 311 bits (798), Expect = 3.590e-96
Identity = 206/483 (42.65%), Postives = 259/483 (53.62%), Query Frame = 2
Query:  413 FLKRHPRVSGLITRIYGTNRITENEEPCIRRFYEVWGEYVKTEDPKADHLHNTDETDTTTLSTKTEKAFAEAGQKVVGSMRSNSRENVT---------SLWSPPS------------------------------------------------AMAPRG-------------------------SQLSSSRGSVCKRI----------------GRRRRTD-HRVRGTPRRTLRSCST-------VFVNYLNDFHKQHGERGLLDGKPNVLVLDGHASHVCYDVIKLDIELDIVLFQLPSHTSHITQPLNIAP----KRR*SKCSRPTHSNTEGRCR*SAT*PA*SGGLGERSFSPHQNKASFAGAGLWPADMDRAMVP-LQGTGKRKPRPTDRPLLADVPIAASQKQLEEDLGKRALRRLRAGGHSIEGPRVGTVMLGGILRQRKRAKKLLTTRAAAGVPDGGILTSKEILDAYAERERANK 1528
            FLKRHPRVS   TRIY +NRITE++EP I  FY+ W  ++    P+ADH+HNTDET TT   TKT KAFAEA QKVV SM SNSREN T         + W+P +                                                A  PR                          S LS+SR +                     G++ + D    R  P+    +C+        VF+ YL DFHKQ  +RG+LD KP++LVLDGHASHV Y+VIKL +E++I+LFQLPSHTSHITQPL++      K+  +K  +  +    G        P        RSF+P ++KASF GA LWP DMDRA+ P LQGT KRK  PT RP L DVPIA + +QLEE +G R LR+L+AGG +I GP+VGTVMLGG+L QRKRAKKL T+R + G+PDGG   S+E L     +ERA+K
Sbjct:    5 FLKRHPRVSERTTRIYESNRITEDKEPRIVEFYKKWAAFLDEHKPEADHVHNTDETGTTLQGTKTMKAFAEAEQKVVESMLSNSRENTTVVTTNSANGATWAPTTIFKGQQLQPDWFAERNGPKDARYTCANSSFMQGDVFIKYLKDXLYLTCAARPRTCSMWTTLQGTKTMKAFAEAEQKVVESMLSNSRENTTVVTTNSANGATWAPTTIFKGQQLQPDWFAERNGPKDARYTCANSSFMQGDVFIKYLKDFHKQLDDRGVLDRKPHILVLDGHASHVSYEVIKLAMEVNIILFQLPSHTSHITQPLDVVAFGTFKKEVTKVLQDYYHANGGLLSLKRDVPGVIAAAWRRSFTPERSKASFGGAALWPVDMDRALPPGLQGTAKRKEGPTGRPPLEDVPIAMTHEQLEEAIGARGLRQLKAGGRTIIGPKVGTVMLGGLLTQRKRAKKLATSRGSLGLPDGGNTNSEEFLAKVDAKERADK 487          
BLAST of mRNA_F-serratus_M_contig70.18185.1 vs. uniprot
Match: A0A6H5JFM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFM5_9PHAE)

HSP 1 Score: 308 bits (789), Expect = 3.100e-95
Identity = 184/409 (44.99%), Postives = 237/409 (57.95%), Query Frame = 2
Query:  278 LPFAARHFFPVGRVQLRETVRQLYSDGRKTPWEANKRPGKAWVQDFLKRHPRVSGLITRIYGTNRITENEEPCIRRFYEVWGEYVKTEDPKADHLHNTDETDTTTLSTKTEKAFAEAGQKVVGSMRSNSRENVTSL---------WSPPSAMAPRGSQLSSSRGSVCKRIGRRRRTDHRV-RGTPRRTLRSCST-------VFVNYLNDFHKQHGERGLLDGKPNVLVLDGHASHVCYDVIKLDIELDIVLFQLPSHTSHITQPLNIAPKRR*SKCSRPTHSNTEGRCR*SAT*PA*SGGLGERSFSPHQNKASFAGAGLWPADMDRAMVPLQGTGKRKPRPTDRPLLADVPIAASQKQLEEDLGKRALRRLRAGGHSIEGPRVGTVMLGGILRQRKRAKKLLTTRAAA 1453
            L FAAR+F  VGRV LR+ VR+L +DGR+ PW+  K PGK W+  F +RHPRV+   TRIY  NRITE+EEP + +FYE W   +    P+A+H+HNTDET TT   TKT KAFAE+GQKVVGSMR+NSREN T +         W+P                      G+R + D  V R  P     +C+        VF+NYL DFHKQ G+RGLLDGKP++L+LDGHASHV  +VIKL + L I+LFQLPSHTSHITQPL++                                 +   SF    NK+ FAGA LWP + +RA+  L+GT K+K R  +R  L D+PIAA  +Q E+D+G RALR LR  GH++ G           +R R+RA + L  + +A
Sbjct:   70 LLFAARNFLAVGRVHLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFRRRHPRVAERSTRIYEANRITEDEEPRMVQFYERWAALLDEFKPEANHVHNTDETGTTPQGTKTTKAFAESGQKVVGSMRANSRENTTVVATISADGHTWAPTIIFK-----------------GQRLQADCFVERNGPEGARHTCTDSSFMQGDVFMNYLKDFHKQLGDRGLLDGKPHILLLDGHASHVSVEVIKLAMNLKIILFQLPSHTSHITQPLDV---------------------------------VAFGSFKKSINKSLFAGASLWPVNKERALGRLKGTAKKKERRDERTPLQDIPIAAHNEQPEKDIGVRALRVLRGQGHTVTG-----------IRTRRRATRRLRGQKSA 417          
BLAST of mRNA_F-serratus_M_contig70.18185.1 vs. uniprot
Match: A0A6H5JYX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX7_9PHAE)

HSP 1 Score: 298 bits (763), Expect = 3.290e-91
Identity = 180/421 (42.76%), Postives = 244/421 (57.96%), Query Frame = 2
Query:  278 LPFAARHFFPVGRVQLRETVRQLYSDGRKTPWEANKRPGKAWVQDFLKRHPRVSGLITRIYGTNRITENEEPCIRRFYEVWGEYVKTEDPKADHLHNTDETDTTTLSTKTEKAFAEAGQKVVGSMRSNSREN---VTSLWSPPSAMAP----RGSQLSSSRGSVCKRIGRRRRTDHRVRGTP------RRTLRSCSTVFVNYLNDFHKQHGERGLLDGKPNVLVLDGHASHVCYDVIKLDIELDIVLFQLPSHTSHITQPLNIAP----KRR*SKCSRPTHSNTEGRCR*SAT*PA*SGGLGERSFSPHQNKASFAGAGLWPADMDRAMVPLQGTGKRKPRPTDRPLLADVPIAASQKQLEEDLGKRALRRLRAGGHSIEGPRVGTVMLGGILRQRKRAKKLLTTRAAAGVPDGGILTSKE 1489
            L +A R+F P+    L E VRQL +DGR  PW  +K PG++W++ FL RH R+S  + RIY +NR+T  E+  + +FY+ WG+++    P ADH+ NTDE+  T   T+ ++  AE GQ VV  MRS SREN   VT++ +  + +AP    +G + +    +              + G P        +   C  VF+ Y+ +FHKQ G+R LLDGKP+VLVLDGHASHV  DVIKL I L+I L QLPSH SHITQPL++A     K+  +K  +   +   G            G     SF+P  NKASFAGAGLWP D +RA+  L    KRK   TDRP L DVPIA + ++LEE +G R +R LRA GH+I G RV TV+LG  L  + +  K    RA  G P+G +L++ E
Sbjct:   85 LLYAGRNFIPLTTADLTERVRQLCNDGRPIPWTPDKGPGRSWLEGFLGRHERISLRLARIYESNRVTSAEDERLHKFYDFWGQFIDEHQPAADHVWNTDESGGTVQGTQGQRVMAERGQPVVAQMRSTSRENCTIVTTINAAGAVLAPTIIFKGQRFNGDWVAD-------------LNGPPGAYYDCTESSFMCGEVFIKYIKNFHKQLGDRNLLDGKPHVLVLDGHASHVTLDVIKLAISLNIHLVQLPSHMSHITQPLDVAGFGCFKKELAKVIQAFPARNGGALPRKRDMAGMIGLAWGSSFTPEINKASFAGAGLWPVDRERALSRLLRP-KRKVTETDRPPLEDVPIAVTNERLEELIGDRGVRALRAKGHTITGLRVSTVVLGNFLPNKNKRPKGPPKRANLGRPEGNLLSAPE 491          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig70.18185.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JV04_9PHAE1.180e-11147.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
B2KWI5_ECTSI8.960e-10945.34Transposase n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5JJ12_9PHAE3.030e-10847.72Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L2E0_9PHAE6.260e-10644.66DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KHG4_9PHAE3.680e-10146.51DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JGP6_9PHAE9.370e-10040.07DDE-1 domain-containing protein (Fragment) n=1 Tax... [more]
A0A6H5JK80_9PHAE1.090e-9942.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JE68_9PHAE3.590e-9642.65DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JFM5_9PHAE3.100e-9544.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYX7_9PHAE3.290e-9142.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig70contigF-serratus_M_contig70:434525..436645 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size1709
Cds size507
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig70.18185.1prot_F-serratus_M_contig70.18185.1Fucus serratus malepolypeptideF-serratus_M_contig70 436135..436641 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932154.0634668-UTR-F-serratus_M_contig70:434524..4351051622932154.0634668-UTR-F-serratus_M_contig70:434524..435105Fucus serratus maleUTRF-serratus_M_contig70 434525..435105 +
1690964173.3568556-UTR-F-serratus_M_contig70:434524..4351051690964173.3568556-UTR-F-serratus_M_contig70:434524..435105Fucus serratus maleUTRF-serratus_M_contig70 434525..435105 +
1622932154.0811768-UTR-F-serratus_M_contig70:435517..4361341622932154.0811768-UTR-F-serratus_M_contig70:435517..436134Fucus serratus maleUTRF-serratus_M_contig70 435518..436134 +
1690964173.3696766-UTR-F-serratus_M_contig70:435517..4361341690964173.3696766-UTR-F-serratus_M_contig70:435517..436134Fucus serratus maleUTRF-serratus_M_contig70 435518..436134 +
1622932154.1152067-UTR-F-serratus_M_contig70:436641..4366451622932154.1152067-UTR-F-serratus_M_contig70:436641..436645Fucus serratus maleUTRF-serratus_M_contig70 436642..436645 +
1690964173.4067266-UTR-F-serratus_M_contig70:436641..4366451690964173.4067266-UTR-F-serratus_M_contig70:436641..436645Fucus serratus maleUTRF-serratus_M_contig70 436642..436645 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932154.0971928-CDS-F-serratus_M_contig70:436134..4366411622932154.0971928-CDS-F-serratus_M_contig70:436134..436641Fucus serratus maleCDSF-serratus_M_contig70 436135..436641 +
1690964173.3946354-CDS-F-serratus_M_contig70:436134..4366411690964173.3946354-CDS-F-serratus_M_contig70:436134..436641Fucus serratus maleCDSF-serratus_M_contig70 436135..436641 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig70.18185.1

>prot_F-serratus_M_contig70.18185.1 ID=prot_F-serratus_M_contig70.18185.1|Name=mRNA_F-serratus_M_contig70.18185.1|organism=Fucus serratus male|type=polypeptide|length=169bp
MDRAMVPLQGTGKRKPRPTDRPLLADVPIAASQKQLEEDLGKRALRRLRA
GGHSIEGPRVGTVMLGGILRQRKRAKKLLTTRAAAGVPDGGILTSKEILD
AYAERERANKAAEEAKAEKAKAREQKRADKETASLAWQASRRGRGEASGV
RLGCERIEGGKEGGAHCW*
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mRNA from alignment at F-serratus_M_contig70:434525..436645+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig70.18185.1 ID=mRNA_F-serratus_M_contig70.18185.1|Name=mRNA_F-serratus_M_contig70.18185.1|organism=Fucus serratus male|type=mRNA|length=2121bp|location=Sequence derived from alignment at F-serratus_M_contig70:434525..436645+ (Fucus serratus male)
TATCAATCTGACCATTCAACCACCAGCTACAGCAGCATAGCCACTACCAC TGCAACGCGGGCCAGCTTGGTCTTTTCGTCGTTCCTGCTGCTAAGCATGG CCTGACATAGGATGGACACAGAGCAGGCTAAAGGTTGTCAGTTAGGTCTG CTGCTGCTCGGTTTCAGGTGGGCAAAAGCACGATCACACGCCGCCTGAGC GGCGAGGTGGCCATGGATGGCAAGGTCGGCCCGGGGACTGCCATGACCGA ACAAGAGGAGAGTACGGTGGAAGATATTTGCCATTCGCTGCTCGTCACTT CTTCCCTGTGGGTCGGGTACAACTGAGAGAGACCGTGAGGCAGCTCTACA GCGATGGCCGCAAGACCCCTTGGGAAGCCAACAAACGCCCGGGGAAGGCG TGGGTTCAGGACTTCCTCAAGAGGCACCCGAGGGTGTCGGGGCTAATCAC CCGCATCTACGGGACCAATCGAATCACCGAGAACGAGGAGCCGTGCATCC GAAGGTTCTACGAGGTGTGGGGAGAGTACGTCAAGACGGAGGACCCGAAG GCCGACCATCTGCACAACACGGATGAGACAGGTGTGAGGATTGACAAGTA GACTATTAATAGTCTAATAATAGTGTTGTTTCAGTAGAAGCTGTATTGTG TGGGGTCCTGTGCAAAGTACCATCAACATTGCAAGATGTCACGATCAGGC AGAGTTATGTCCCTGCGCCGAAATATATTCTTTGTTTTGTAGTCTGCAGA GACCGCGATCTTTTGCGTACCACACACAGCTGCCGTGCGCTGGCTAGAGT ATAGAGTATAGACTGGTATACAGCAGTAGGCTAGTCTCCAGACATGAAAA GAACGCGGCTCCTAAGAAACAGCTGTGTCGCATGATGCCGGCAAGACTTA GTGTGTTCCGCACTGCTGCATGCCATCTGCACTAACTGTCCATCCGCCCT GATCCCGGATGCGCGCTTTTCCCACCACGTCAATTGGTTCTAGATACTAC CACGCTAAGTACGAAGACGGAGAAGGCGTTTGCGGAAGCTGGGCAAAAAG TGGTGGGTTCGATGCGCTCCAACTCCCGAGAGAACGTCACGTCACTGTGG TCACCACCATCAGCGATGGCACCACGTGGAAGCCAACTATCATCTTCAAG GGGCAGCGTGTGCAAGCGGATTGGACGTCGGAGGAGAACGGACCACCGGG TGCGAGGTACACCGCGACGCACTCTTCGTTCATGCAGCACCGTGTTCGTC AACTACCTCAATGACTTTCACAAGCAGCACGGCGAGCGAGGCTTGCTCGA CGGAAAACCGAATGTTCTCGTGCTCGATGGCCACGCCTCGCACGTGTGCT ACGACGTCATTAAGTTGGACATCGAGCTCGACATCGTCCTCTTCCAGCTG CCCTCCCACACGTCACACATCACCCAGCCCTTGAACATCGCTCCAAAAAG GAGGTGATCAAAGTGCTCACGGCCTACCCATTCAAACACGGAGGGACGTT GCCGCTGAAGCGCGACATGACCGGCGTGATCGGGGGGGCTTGGAGAAAGG AGCTTTTCGCCGCACCAGAACAAAGCATCATTCGCCGGGGCGGGTCTATG GCCGGCGGATATGGACCGGGCGATGGTACCGCTCCAGGGCACGGGGAAGA GGAAGCCGCGGCCAACCGATCGCCCACTCCTAGCGGACGTCCCCATCGCT GCCTCCCAAAAGCAGCTGGAAGAAGACCTTGGCAAGCGTGCCCTCCGCCG GCTGAGGGCAGGTGGGCATAGCATCGAGGGGCCCCGTGTCGGCACGGTGA TGCTCGGCGGGATCCTGCGTCAGAGGAAGCGCGCCAAAAAGCTGCTGACC ACGCGGGCCGCGGCGGGCGTTCCCGACGGGGGCATACTCACCTCGAAAGA AATACTGGATGCTTACGCGGAGAGAGAGCGCGCAAACAAGGCGGCCGAGG AAGCTAAAGCGGAGAAGGCGAAGGCGCGCGAACAGAAGAGAGCAGACAAG GAGACCGCGAGCCTGGCATGGCAAGCGAGCAGAAGAGGACGGGGAGAAGC GAGCGGGGTGCGCTTGGGGTGCGAGCGCATCGAGGGAGGAAAGGAGGGAG GGGCGCACTGTTGGTGATGGG
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Coding sequence (CDS) from alignment at F-serratus_M_contig70:434525..436645+

>mRNA_F-serratus_M_contig70.18185.1 ID=mRNA_F-serratus_M_contig70.18185.1|Name=mRNA_F-serratus_M_contig70.18185.1|organism=Fucus serratus male|type=CDS|length=1014bp|location=Sequence derived from alignment at F-serratus_M_contig70:434525..436645+ (Fucus serratus male)
ATGGACCGGGCGATGGTACCGCTCCAGGGCACGGGGAAGAGGAAGCCGCG
GCCAACCGATCGCCCACTCCTAGCGGACGTCCCCATCGCTGCCTCCCAAA
AGCAGCTGGAAGAAGACCTTGGCAAGCGTGCCCTCCGCCGGCTGAGGGCA
GGTGGGCATAGCATCGAGGGGCCCCGTGTCGGCACGGTGATGCTCGGCGG
GATCCTGCGTCAGAGGAAGCGCGCCAAAAAGCTGCTGACCACGCGGGCCG
CGGCGGGCGTTCCCGACGGGGGCATACTCACCTCGAAAGAAATACTGGAT
GCTTACGCGGAGAGAGAGCGCGCAAACAAGGCGGCCGAGGAAGCTAAAGC
GGAGAAGGCGAAGGCGCGCGAACAGAAGAGAGCAGACAAGGAGACCGCGA
GCCTGGCATGGCAAGCGAGCAGAAGAGGACGGGGAGAAGCGAGCGGGGTG
CGCTTGGGGTGCGAGCGCATCGAGGGAGGAAAGGAGGGAGGGGCGCACTG
TTGGTGAATGGACCGGGCGATGGTACCGCTCCAGGGCACGGGGAAGAGGA
AGCCGCGGCCAACCGATCGCCCACTCCTAGCGGACGTCCCCATCGCTGCC
TCCCAAAAGCAGCTGGAAGAAGACCTTGGCAAGCGTGCCCTCCGCCGGCT
GAGGGCAGGTGGGCATAGCATCGAGGGGCCCCGTGTCGGCACGGTGATGC
TCGGCGGGATCCTGCGTCAGAGGAAGCGCGCCAAAAAGCTGCTGACCACG
CGGGCCGCGGCGGGCGTTCCCGACGGGGGCATACTCACCTCGAAAGAAAT
ACTGGATGCTTACGCGGAGAGAGAGCGCGCAAACAAGGCGGCCGAGGAAG
CTAAAGCGGAGAAGGCGAAGGCGCGCGAACAGAAGAGAGCAGACAAGGAG
ACCGCGAGCCTGGCATGGCAAGCGAGCAGAAGAGGACGGGGAGAAGCGAG
CGGGGTGCGCTTGGGGTGCGAGCGCATCGAGGGAGGAAAGGAGGGAGGGG
CGCACTGTTGGTGA
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