prot_F-serratus_M_contig70.18171.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig70.18171.1
Unique Nameprot_F-serratus_M_contig70.18171.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length211
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig70.18171.1 vs. uniprot
Match: D8LRZ3_ECTSI (Katanin p60 ATPase-containing subunit A1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRZ3_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 6.320e-19
Identity = 72/184 (39.13%), Postives = 89/184 (48.37%), Query Frame = 0 
Query:    1 MDIVRGIMEEIAQIASFIGNPSPAAERRSSGGIAFTTGEEGDLATNVISRERRSGPPPHRDAV----GVVNLGDSYSRATTDDDALVADLGFESFQVRVDSDPSQPSDPDVWPLQTPKPLRGALQAVPEAASAAVESSSY--------GSVSRSKRESAAAGAAALAIEKARQSLPAWARLATP 172
            + IV+ I++E+A+  S  G+  P  ERRSSGG+AFT GE GDLA  V SRE +      R ++       N+G +  R          DLG  S  +  D  P    DPDVWP  TP P RG        A+A     S         G V+ SK       AAALA + ARQ LPAWAR  TP
Sbjct:   71 LKIVKDIVKELARTVSLAGSSGPTEERRSSGGVAFTAGEPGDLAVRVSSRENQHQQHHSRGSIIDGRNRQNIGGAVDRL---------DLGLGSLAIDPDG-PVATDDPDVWPPPTPDPSRGGAVLHQAGAAAGGGPGSGLSPGPRFGGGVASSKLVRREVAAAALASDMARQQLPAWARAGTP 244
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig70.18171.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRZ3_ECTSI6.320e-1939.13Katanin p60 ATPase-containing subunit A1 n=1 Tax=E... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig70contigF-serratus_M_contig70:129066..130277 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig70.18171.1mRNA_F-serratus_M_contig70.18171.1Fucus serratus malemRNAF-serratus_M_contig70 129066..133116 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig70.18171.1 ID=prot_F-serratus_M_contig70.18171.1|Name=mRNA_F-serratus_M_contig70.18171.1|organism=Fucus serratus male|type=polypeptide|length=211bp
MDIVRGIMEEIAQIASFIGNPSPAAERRSSGGIAFTTGEEGDLATNVISR
ERRSGPPPHRDAVGVVNLGDSYSRATTDDDALVADLGFESFQVRVDSDPS
QPSDPDVWPLQTPKPLRGALQAVPEAASAAVESSSYGSVSRSKRESAAAG
AAALAIEKARQSLPAWARLATPPPAGEVVHRRSCGGGGGVGSGGGNGLAA
AKGGASRVDAA
back to top