prot_F-serratus_M_contig70.18194.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig70.18194.1
Unique Nameprot_F-serratus_M_contig70.18194.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length598
Homology
BLAST of mRNA_F-serratus_M_contig70.18194.1 vs. uniprot
Match: A0A6H5JF85_9PHAE (CID domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF85_9PHAE)

HSP 1 Score: 252 bits (643), Expect = 4.130e-69
Identity = 172/306 (56.21%), Postives = 187/306 (61.11%), Query Frame = 0
Query:    1 MANDDWDGAVPMNKALKALATSVRPISASRVKTAAATALENVKEYKRVVYAIERFIRKAPPQHRIGGCFVIDSVCRQAQSKWGHKDVFTPRFAQRMATETVEMLRRVPDDDKPPVFRVIREWHEKGIFKGLGSFAAGXXXXXXXXXXXXXXASRASTDSSARLSHHSRLRDG------------GTVSLGLPDGDSYSSAYSRHSDGND--------------------------------------PLGASYGGDSSAAGGGQIMGVDGEDEPLSDSRFVPQEPPLPEQDPSAGSD-DVGDVQQQ 255
            MANDDWDGA PMNKALK LATS RPISASRVKTAAA AL+NVKEYKRVV+AIER+IRKA PQHRIGGCFVIDSVCRQA SKWGHKDVFTPRFAQRM+ ETVE LR VPD DKPPVFRVIREWHEKG+FKGL +FA+    XXXXXXXXXXX                                 G + LGL  GD+Y SAY  H+                                          P G + GG      GG++      DEPLSDSRFVPQEPPLP+ D +  S  DVG VQQQ
Sbjct:    1 MANDDWDGAAPMNKALKVLATSSRPISASRVKTAAARALDNVKEYKRVVHAIERYIRKAQPQHRIGGCFVIDSVCRQAHSKWGHKDVFTPRFAQRMS-ETVENLRNVPDGDKPPVFRVIREWHEKGMFKGLEAFASTGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPALMPLPPPTGVIHLGLKAGDTYGSAYPPHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAPAGVANGG-----WGGRL------DEPLSDSRFVPQEPPLPDNDHAVSSGTDVGGVQQQ 294          
BLAST of mRNA_F-serratus_M_contig70.18194.1 vs. uniprot
Match: D8LJK6_ECTSI (CID domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJK6_ECTSI)

HSP 1 Score: 233 bits (594), Expect = 8.490e-69
Identity = 116/136 (85.29%), Postives = 124/136 (91.18%), Query Frame = 0
Query:    1 MANDDWDGAVPMNKALKALATSVRPISASRVKTAAATALENVKEYKRVVYAIERFIRKAPPQHRIGGCFVIDSVCRQAQSKWGHKDVFTPRFAQRMATETVEMLRRVPDDDKPPVFRVIREWHEKGIFKGLGSFAA 136
            M NDDWDGA  M+KALK LATS RPISASRVKTAAA AL+NVKEYKRVV+AIER+IRKA PQHRIGGCFVIDSVCRQAQSKWGHKDVFTPRFAQRM+ ETVE LR VPD DKPPVFRVIREWHEKG+FKGL +FA+
Sbjct:    1 MTNDDWDGAASMHKALKVLATSSRPISASRVKTAAARALDNVKEYKRVVHAIERYIRKAQPQHRIGGCFVIDSVCRQAQSKWGHKDVFTPRFAQRMS-ETVENLRNVPDGDKPPVFRVIREWHEKGMFKGLEAFAS 135          
BLAST of mRNA_F-serratus_M_contig70.18194.1 vs. uniprot
Match: A0A835ZBE3_9STRA (CID domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBE3_9STRA)

HSP 1 Score: 118 bits (296), Expect = 8.780e-25
Identity = 65/125 (52.00%), Postives = 83/125 (66.40%), Query Frame = 0
Query:    9 AVPMNKALKALATSVRPISASRVKTAAATALENVKEYKRVVYAIERFIRKAPPQHRIGGCFVIDSVCRQA--QSKWGHKD---VFTPRFAQRMATETVEMLRRVPDDDKPPVFRVIREWHEKGIF 128
            A  +NKAL  LATS RPISA+RVK AA  A   VKEYKRVV+A+E+F++ A PQ R+G  ++IDS+C+ +      G KD   VF  RF QRM  ET+  LR VP  D+P V RV+  WH +G+F
Sbjct:    3 AAALNKALAYLATSKRPISAARVKEAAKEAQAQVKEYKRVVHAVEKFLKHAKPQQRLGVVYLIDSLCKSSGRPPSAGAKDSGLVFAARFGQRMRGETLPKLREVPSSDRPAVERVVANWHTRGLF 127          
BLAST of mRNA_F-serratus_M_contig70.18194.1 vs. uniprot
Match: A0A397BZL8_9STRA (CID domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BZL8_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 8.730e-16
Identity = 49/124 (39.52%), Postives = 78/124 (62.90%), Query Frame = 0
Query:    6 WDGAVPMNKALKALATSVRPISASRVKTAAATALENVKEYKRVVYAIERFIRKAPPQHRIGGCFVIDSVCRQAQSKWGH-KDVFTPRFAQRMATETVEMLRRVPDDDKPPVFRVIREWHEKGIF 128
            W G   +  AL +LAT+ + +SA+R+K A    ++  KEYKRVV+A+E  + KA  +HR+   ++ID++ R +Q+K+G  KD F  RF   M   T+   R+VPDD K  V +V+ EW ++G++
Sbjct:    4 WKGEEELKGALSSLATA-KGVSANRIKGATVACMKWSKEYKRVVHAVENVMWKADVEHRLAYMYLIDALIRASQTKFGDDKDHFAKRFGLHMH-HTLSACRKVPDDHKSNVKKVVVEWKKRGVY 125          
BLAST of mRNA_F-serratus_M_contig70.18194.1 vs. uniprot
Match: A0A1V9ZH29_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZH29_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 2.720e-15
Identity = 48/123 (39.02%), Postives = 84/123 (68.29%), Query Frame = 0
Query:    7 DGAVPMNKALKALATSVRPISASRVKTAAATALENVKEYKRVVYAIERFIRKAPPQHRIGGCFVIDSVCRQAQSKWG-HKDVFTPRFAQRMATETVEMLRRVPDDDKPPVFRVIREWHEKGIF 128
            +G   + +AL  +AT  +  SA++VKTA+A  L  VK+YKRVV+A+E  + K+  +HR+G  ++ID++ RQ+Q+K+G  KD+F PRF+Q ++  T+  L+++PDD +    R++ +W  + +F
Sbjct:    7 EGEADLKEALAPIATP-KGTSATKVKTASALCLRMVKDYKRVVHAVETLMWKS--EHRLGFLYLIDAIIRQSQAKFGSEKDLFAPRFSQHLS-HTISSLKQLPDDGQEHAHRIVYDWVTRRVF 125          
BLAST of mRNA_F-serratus_M_contig70.18194.1 vs. uniprot
Match: A0A397C522_9STRA (CID domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C522_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 3.110e-15
Identity = 49/124 (39.52%), Postives = 78/124 (62.90%), Query Frame = 0
Query:    6 WDGAVPMNKALKALATSVRPISASRVKTAAATALENVKEYKRVVYAIERFIRKAPPQHRIGGCFVIDSVCRQAQSKWGH-KDVFTPRFAQRMATETVEMLRRVPDDDKPPVFRVIREWHEKGIF 128
            W G   +  AL +LAT+ + +SA+R+K A    ++  KEYKRVV+A+E  + KA  +HR+   ++ID++ R +Q+K+G  KD F  RF   M   T+   R+VPDD K  V +V+ EW ++G++
Sbjct:    4 WKGEEELKGALSSLATA-KGVSANRIKGATVACMKWSKEYKRVVHAVENVMWKADVEHRLAYMYLIDALIRASQTKFGDDKDHFAKRFGLHMH-HTLSACRKVPDDHKSNVKKVVVEWKKRGVY 125          
BLAST of mRNA_F-serratus_M_contig70.18194.1 vs. uniprot
Match: A0A6G0WM24_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WM24_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 4.090e-15
Identity = 50/124 (40.32%), Postives = 79/124 (63.71%), Query Frame = 0
Query:    6 WDGAVPMNKALKALATSVRPISASRVKTAAATALENVKEYKRVVYAIERFIRKAPPQHRIGGCFVIDSVCRQAQSKWGH-KDVFTPRFAQRMATETVEMLRRVPDDDKPPVFRVIREWHEKGIF 128
            W G   + +ALK+LAT+ + ISA+R+K A    ++  KEYKRVV+A+E  + KA  +HR+   ++ID++ R +Q+K+G  KD F  RF   +   T+   R+VPDD K  V RV+ EW ++ ++
Sbjct:    4 WKGEEEVGEALKSLATA-KGISATRIKNACTVLMKWSKEYKRVVHAVEHVLWKADAEHRLAYLYLIDALIRASQAKYGEDKDTFGKRFGIHL-NHTLAACRKVPDDAKGNVKRVVAEWIKRNVY 125          
BLAST of mRNA_F-serratus_M_contig70.18194.1 vs. uniprot
Match: A0A418FAE5_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418FAE5_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.450e-14
Identity = 49/124 (39.52%), Postives = 78/124 (62.90%), Query Frame = 0
Query:    6 WDGAVPMNKALKALATSVRPISASRVKTAAATALENVKEYKRVVYAIERFIRKAPPQHRIGGCFVIDSVCRQAQSKWGH-KDVFTPRFAQRMATETVEMLRRVPDDDKPPVFRVIREWHEKGIF 128
            W G   +  AL +LAT+ + +SA+R+K A    ++  KEYKRVV+A+E  + KA  +HR+   ++ID++ R +Q+K+G  KD F  RF   M   T+   R+VPDD K  V +V+ EW ++G++
Sbjct:    4 WKGEEELKGALSSLATA-KGVSANRIKGATVACMKWSKEYKRVVHAVENVMWKADVEHRLAYMYLIDALIRASQTKFGDDKDHFAKRFGLHMH-HTLSACRKVPDDHKSNVKKVVVEWKKRGVY 125          
BLAST of mRNA_F-serratus_M_contig70.18194.1 vs. uniprot
Match: A0A6G0UTM1_9BILA (Uncharacterized protein n=1 Tax=Halicephalobus sp. NKZ332 TaxID=2598192 RepID=A0A6G0UTM1_9BILA)

HSP 1 Score: 88.2 bits (217), Expect = 1.620e-14
Identity = 44/118 (37.29%), Postives = 69/118 (58.47%), Query Frame = 0
Query:   12 MNKALKALATSVRPISASRVKTAAATALENVKEYKRVVYAIERFIRKAPPQHRIGGCFVIDSVCRQAQSKWGHKDVFTPRFAQRMATETVEMLRRVPDDDKPPVFRVIREWHEKGIFK 129
            + + L  L  S  P    ++      A+ +V+ +K VV+A+E+FI K  P H++ G ++IDS+ RQ+Q K+ HKDVF PRF+  +  +T+E   R P  D+P + RVI  W    IF+
Sbjct:    9 LEELLTGLTESKAPPGKQQIMDVTKQAMASVRHFKHVVHAVEKFIVKCKPTHKLHGFYMIDSIIRQSQKKFKHKDVFKPRFSANLK-QTLENALRCPPKDRPKIVRVINLWRANHIFE 125          
BLAST of mRNA_F-serratus_M_contig70.18194.1 vs. uniprot
Match: W4FDW6_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FDW6_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 2.440e-14
Identity = 49/124 (39.52%), Postives = 78/124 (62.90%), Query Frame = 0
Query:    6 WDGAVPMNKALKALATSVRPISASRVKTAAATALENVKEYKRVVYAIERFIRKAPPQHRIGGCFVIDSVCRQAQSKWGH-KDVFTPRFAQRMATETVEMLRRVPDDDKPPVFRVIREWHEKGIF 128
            W G   +  AL +LAT+ + +SA+R+K A    ++  KEYKRVV+A+E  + KA  +HR+   ++ID++ R +Q+K+G  KD F  RF   M   T+   R+VPDD K  V +V+ EW ++G++
Sbjct:    4 WKGEEELKGALSSLATA-KGVSANRIKGATVACMKWSKEYKRVVHAVENVMWKADVEHRLAYMYLIDALIRASQTKFGDDKDHFAKRFGLHMH-HTLSACRKVPDDHKSNVKKVVVEWKKRGVY 125          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig70.18194.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JF85_9PHAE4.130e-6956.21CID domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LJK6_ECTSI8.490e-6985.29CID domain-containing protein (Fragment) n=1 Tax=E... [more]
A0A835ZBE3_9STRA8.780e-2552.00CID domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A397BZL8_9STRA8.730e-1639.52CID domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A1V9ZH29_9STRA2.720e-1539.02Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A397C522_9STRA3.110e-1539.52CID domain-containing protein n=4 Tax=Aphanomyces ... [more]
A0A6G0WM24_9STRA4.090e-1540.32Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A418FAE5_9STRA1.450e-1439.52Uncharacterized protein n=5 Tax=Aphanomyces astaci... [more]
A0A6G0UTM1_9BILA1.620e-1437.29Uncharacterized protein n=1 Tax=Halicephalobus sp.... [more]
W4FDW6_9STRA2.440e-1439.52Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 326..346
NoneNo IPR availablePANTHERPTHR15921:SF7PROTEIN SCAF8coord: 16..129
NoneNo IPR availablePANTHERPTHR15921PRE-MRNA CLEAVAGE COMPLEX IIcoord: 16..129
IPR006569CID domainSMARTSM00582558neu5coord: 14..132
e-value: 7.0E-7
score: 38.9
IPR008942ENTH/VHSGENE3D1.25.40.90coord: 9..131
e-value: 8.4E-31
score: 108.5
IPR008942ENTH/VHSSUPERFAMILY48464ENTH/VHS domaincoord: 12..125
IPR006903RNA polymerase II-binding domainPFAMPF04818CTD_bindcoord: 64..128
e-value: 1.4E-7
score: 32.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig70contigF-serratus_M_contig70:633468..643509 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig70.18194.1mRNA_F-serratus_M_contig70.18194.1Fucus serratus malemRNAF-serratus_M_contig70 632474..643575 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig70.18194.1 ID=prot_F-serratus_M_contig70.18194.1|Name=mRNA_F-serratus_M_contig70.18194.1|organism=Fucus serratus male|type=polypeptide|length=598bp
MANDDWDGAVPMNKALKALATSVRPISASRVKTAAATALENVKEYKRVVY
AIERFIRKAPPQHRIGGCFVIDSVCRQAQSKWGHKDVFTPRFAQRMATET
VEMLRRVPDDDKPPVFRVIREWHEKGIFKGLGSFAAGGGGITSGSSSRHH
RASRASTDSSARLSHHSRLRDGGTVSLGLPDGDSYSSAYSRHSDGNDPLG
ASYGGDSSAAGGGQIMGVDGEDEPLSDSRFVPQEPPLPEQDPSAGSDDVG
DVQQQEYEPDDETPPPPPPPPPPPGPPPPRPSEEMNGSLGQQTEELQEQP
PQPPIPVGDAGEADRETEEETDWTTQQQQQQGVEEGEEELDEEEGEEKEE
ERPPPPPPPPPKSEGKIMELWTLLNTAQASSVTTSVTPTTAASASTTAAE
CPEEEMSLEEPAPASPAGTDSMVREDETFLPPPPPPPPPPPPPPPATTLP
PQDVRNVVGMHADMRACGDHASAVAGSEANPPPPPPPPLERSSSFPGGGA
EEGNGARAGGVEGHALPPLPPPPPPPPPPPPPDEASEDGPRYDPFAAPSG
GLPPGSRAPQPPLGTRGPPGMVNHQGGPMLRGQHNQYRMPPGGWCLV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006569CID_dom
IPR008942ENTH_VHS
IPR006903RNA_pol_II-bd