mRNA_F-serratus_M_contig7.18165.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig7.18165.1 vs. uniprot
Match: A0A6H5JG16_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JG16_9PHAE) HSP 1 Score: 274 bits (700), Expect = 1.130e-82 Identity = 158/241 (65.56%), Postives = 181/241 (75.10%), Query Frame = 3
Query: 726 GSTLSRS-GASARLHRRRAR----SSASSDTALRAMAIPPCCALPSVDLLREAYGRRPNFWGDLTPAETRRFYHELLPVSLRASATVS---IDSNGQPFERPFDRVGDVVGLATVVNAFAEE----WECVFGAAETLEEKARLASMARHAAKLYVRERCQLPVRVVTHLYDGLRHLKNHGTFRVAGMTYEELWEKYEKQIRTEDPTLEDEDLKTRICLRILEKSCSTNRVLNSISGCSALN 1412
GS SR+ GAS R RAR SSA+SD+AL AMAIP CALPSVDLLR+AYG R +FWGDLTPAETRRFYHELLPVS+ A + D N ERP GLATVV+ + WE FGAAETLEE+ARLASMARHAA+LYVRERC+LP RVV HLYDGLRHLK HG+FRV G T+ ELW+KYE++IR+EDP+LE EDLKT ICLRILEKSCST+ + N++SGCS LN
Sbjct: 95 GSGASRNDGASPGRRRPRARTGGSSSANSDSALHAMAIPARCALPSVDLLRQAYGPRRHFWGDLTPAETRRFYHELLPVSVYVDAVGAKALCDGN----ERPLGGGMSGGGLATVVDVANRQQGGHWEYFFGAAETLEERARLASMARHAARLYVRERCKLPSRVVAHLYDGLRHLKRHGSFRVTGETWPELWDKYERKIRSEDPSLEGEDLKTAICLRILEKSCSTSEMFNNLSGCSDLN 331
BLAST of mRNA_F-serratus_M_contig7.18165.1 vs. uniprot
Match: A0A835YPF0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPF0_9STRA) HSP 1 Score: 155 bits (392), Expect = 3.410e-39 Identity = 88/202 (43.56%), Postives = 115/202 (56.93%), Query Frame = 3
Query: 795 SDTALRAMAIPPCCALPSVDLLREAYGRRPNFWGDLTPAETRRFYHELLPVSLRASATVSIDSNGQPFERPFDRVGDVVGLATVVNAFAEEWECVFGAAETLEEKARLASMARHAAKLYVRERCQLPVRVVTHLYDGLRHLKNHGTFRVAGMTYEELWEKYEKQIRTE-DPTLEDEDLKTRICLRILEKSCSTNRVLNSISG 1397
S T L A +P + VDLLR YG NFWGDL+ +TR FYH+LLPVSL + D++ A TLEE+AR ASMARHAA+LY RERC LP R+ LYDG RHL+ +GT+ +G T++ELW KYE Q+R E P +E ++ +C RILEKSCSTN++ + ++G
Sbjct: 67 SSTKLAAAVLPDPYPVAEVDLLRRIYGPARNFWGDLSAQQTRAFYHDLLPVSLLQLEQEAADAS---------------------------------APLTLEERARRASMARHAARLYARERCALPSRITAALYDGFRHLQRYGTWNASGQTWDELWAKYEVQVRAELGPQAGEEAIRDGVCWRILEKSCSTNKMFDRLTG 235
BLAST of mRNA_F-serratus_M_contig7.18165.1 vs. uniprot
Match: A0A836C9L0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9L0_9STRA) HSP 1 Score: 141 bits (356), Expect = 3.300e-34 Identity = 83/199 (41.71%), Postives = 111/199 (55.78%), Query Frame = 3
Query: 807 LRAMAIPPCCALPSVDLLREAYG-RRPNFWGDLTPAETRRFYHELLPVSLRASATVSIDSNGQPFERPFDRVGDVVGLATVVNAFAEEWECVFGAAETLEEKARLASMARHAAKLYVRERCQLPVRVVTHLYDGLRHLKNHGTFRVAGMTYEELWEKYEKQIRTE-DPTLEDEDLKTRICLRILEKSCSTNRVLNSISG 1397
L A +P + + LR+ YG RR FWGDL+ +TR FYHELLPVSL+ A D+ L TLEE+AR ASMARHAA+LY RERC LP R+ LYDG RH + +GT+ +G T++ELW KYE Q+R E P ++ ++ +C RILEKSC TN++ + ++G
Sbjct: 80 LSAAVLPDPYPVADLQSLRKVYGPRRNKFWGDLSNKQTRAFYHELLPVSLQFEAD------------------DLCSL-------------------TLEERARRASMARHAARLYARERCALPGRLTAVLYDGFRHFRKYGTWNSSGQTWDELWAKYEGQVRRECGPEASEDAIRDAVCRRILEKSCCTNKMFDRLAG 241
BLAST of mRNA_F-serratus_M_contig7.18165.1 vs. uniprot
Match: A0A7S2V3N8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3N8_9STRA) HSP 1 Score: 128 bits (322), Expect = 9.520e-30 Identity = 68/186 (36.56%), Postives = 103/186 (55.38%), Query Frame = 3
Query: 840 LPSVDLLREAYGRRPNFWGDLTPAETRRFYHELLPVSLRASATVSIDSNGQPFERPFDRVGDVVGLATVVNAFAEEWECVFGAAETLEEKARLASMARHAAKLYVRERCQLPVRVVTHLYDGLRHLKNHGTFRVAGMTYEELWEKYEKQIRTEDPTLEDEDLKTRICLRILEKSCSTNRVLNSISG 1397
L +VD R+ YG ++WGD + +ETR+ YHELLPVS F + G++ LEE+A+ AS ARH+A++Y RERC LP R+V LYDG R ++HG + G+T+E++W KYEK++ E P + ++DL+ + RI++ +C TN V +S +G
Sbjct: 107 LTTVDDFRQTYGHNKHWWGDFSSSETRKLYHELLPVS-------------------FASLDQTHGMS-------------------LEERAKAASAARHSARIYARERCTLPGRIVAQLYDGFRSWRSHGEWNPDGLTWEQIWLKYEKRVLKELPNISNDDLEEEVYRRIIQSACRTNNVFDSATG 254
BLAST of mRNA_F-serratus_M_contig7.18165.1 vs. uniprot
Match: A0A7S2YJQ8_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YJQ8_9STRA) HSP 1 Score: 112 bits (279), Expect = 3.340e-23 Identity = 75/204 (36.76%), Postives = 104/204 (50.98%), Query Frame = 3
Query: 783 SSASSDTALRAMAIPPCCALPSVDLLREAYGRRPN-FWGDLTPAETRRFYHELLPVSLRASATVSIDSNGQPFERPFDRVGDVVGLATVVNAFAEEWECVFGAAETLEEKARLASMARHAAKLYVRERCQLPVRVVTHLYDGLRHLKNHGTFRVAGMTYEELWEKYEKQIRTEDPTLEDEDLKTRICLRILEKSCSTNRVLNSI 1391
S++SS TA A A + +V+ LR+ +GR N FWGDL + TRR Y LLP A E + C ++E L A LA AR AAK Y RER ++P RV L+DG R +G F+ +GM+Y +LWEKY QI ED ++DL +++C +ILEKSC TN+ ++S+
Sbjct: 131 STSSSSTAKEAWA----ASFTTVEALRDTFGRNKNAFWGDLDASTTRRLYKTLLP-----------------------------------RALLELYHCEGASSEDL---APLAYRARVAAKKYARERSEVPARVAASLFDGWRQFCKYGRFQSSGMSYPQLWEKYATQIMEEDDFENEQDLTSKVCYKILEKSCETNQKVDSL 292
BLAST of mRNA_F-serratus_M_contig7.18165.1 vs. uniprot
Match: K8YVG2_NANGC (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YVG2_NANGC) HSP 1 Score: 108 bits (269), Expect = 7.390e-22 Identity = 71/184 (38.59%), Postives = 90/184 (48.91%), Query Frame = 3
Query: 840 LPSVDLLREAYGRRPNFWGDLTPAETRRFYHELLPVSLRASATVSIDSNGQPFERPFDRVGDVVGLATVVNAFAEEWECVFGAAETLEEKARLASMARHAAKLYVRERCQLPVRVVTHLYDGLRHLKNHGTFRVAGMTYEELWEKYEKQIRTE------DPTLEDEDLKTRICLRILEKSCSTN 1373
+ +VD LR +G+ +FWGDL ETR YH+LLP L A D A +E+ ARLAS ARHAA+LY RER LP+R+ LYDG RHL G + GM+YEE+W KYE +I+ E + E+L + RILEKSC TN
Sbjct: 124 ITTVDGLRTRHGQG-SFWGDLNHVETRYVYHQLLPRHLLQDAQAHPD------------------------------------ALAVEDLARLASTARHAARLYARERSSLPLRLAAGLYDGFRHLSTFGRWSWTGMSYEEVWCKYESKIQKELAEEGRAGQVGQEELNRMVAFRILEKSCETN 270
BLAST of mRNA_F-serratus_M_contig7.18165.1 vs. uniprot
Match: W7TMN0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMN0_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.340e-21 Identity = 71/184 (38.59%), Postives = 90/184 (48.91%), Query Frame = 3
Query: 840 LPSVDLLREAYGRRPNFWGDLTPAETRRFYHELLPVSLRASATVSIDSNGQPFERPFDRVGDVVGLATVVNAFAEEWECVFGAAETLEEKARLASMARHAAKLYVRERCQLPVRVVTHLYDGLRHLKNHGTFRVAGMTYEELWEKYEKQIRTE------DPTLEDEDLKTRICLRILEKSCSTN 1373
+ +VD LR +G+ +FWGDL ETR YH+LLP L A D A +E+ ARLAS ARHAA+LY RER LP+R+ LYDG RHL G + GM+YEE+W KYE +I+ E + E+L + RILEKSC TN
Sbjct: 124 ITTVDGLRTRHGQG-SFWGDLNHVETRYVYHQLLPRHLLQDAQAHPD------------------------------------ALAVEDLARLASTARHAARLYARERSSLPLRLAAGLYDGFRHLSTFGRWSWTGMSYEEVWCKYESKIQKELAEEGRAGQVGQEELNRMVAFRILEKSCETN 270
BLAST of mRNA_F-serratus_M_contig7.18165.1 vs. uniprot
Match: A0A7S2A7A3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A7A3_TRICV) HSP 1 Score: 103 bits (258), Expect = 1.730e-20 Identity = 69/183 (37.70%), Postives = 90/183 (49.18%), Query Frame = 3
Query: 849 VDLLREAYGRRPN-FWGDLTPAETRRFYHELLPVSLRASATVSIDSNGQPFERPFDRVGDVVGLATVVNAFAEEWECVFGAAETLEEKARLASMARHAAKLYVRERCQLPVRVVTHLYDGLRHLKNHGTFRVAGMTYEELWEKYEKQIRTE-DPTLEDEDLKTRICLRILEKSCSTNRVLNSI 1391
V LR +G N WGD P TRR YH LLP +L A + I T +E A LA AR+AAK Y RER +P RV + YDG R +++G + GMT+E++WEKYE+QI E +DE+L +ICLRILE+SC TN ++ I
Sbjct: 35 VSTLRHTFGTNRNKLWGDFDPETTRRLYHTLLPRALMALKDLGI--------------------------------------MTEKELAPLAYEARNAAKKYARERSMVPGRVFSMCYDGYRSWRSYGKWNPEGMTWEQVWEKYEQQIVDELSDDHDDEELTRQICLRILERSCKTNPTVDKI 179
BLAST of mRNA_F-serratus_M_contig7.18165.1 vs. uniprot
Match: A0A7S2KET3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KET3_9STRA) HSP 1 Score: 103 bits (258), Expect = 2.890e-20 Identity = 69/188 (36.70%), Postives = 89/188 (47.34%), Query Frame = 3
Query: 849 VDLLREAYGRRPN-FWGDLTPAETRRFYHELLP-VSLRASATVSIDSNGQPFERPFDRVGDVVGLATVVNAFAEEWECVFGAAETLEEKARLASMARHAAKLYVRERCQLPVRVVTHLYDGLRHLKNHGTFRVAGMTYEELWEKYEKQIRTE-------DPTLEDEDLKTRICLRILEKSCSTNRVLN 1385
V LR +G N WGDL R+ YH LLP V L+ T D + E A LA AR AAK Y RERC +P R+ +DG+RH K +G + GM+++E+WEKYE +I+ E DPTL+ EDL +CLRILEKSC TN ++
Sbjct: 143 VSTLRSLFGANRNKLWGDLDNESARKLYHSLLPRVLLKLYQTRDFDISPG-------------------------------------ELAPLAYEARVAAKEYARERCNVPGRIFAMAFDGIRHFKTYGKWSSKGMSWDEIWEKYELEIQEEIMSMHGLDPTLKVEDLTREVCLRILEKSCKTNDAID 293
BLAST of mRNA_F-serratus_M_contig7.18165.1 vs. uniprot
Match: A0A6U0ZDZ1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0ZDZ1_9STRA) HSP 1 Score: 100 bits (250), Expect = 4.420e-20 Identity = 69/204 (33.82%), Postives = 105/204 (51.47%), Query Frame = 3
Query: 846 SVDLLREAYGRRPNFWGDLTPAETRRFYHELLPVSLRASATVSIDSNGQPFERPFDRVGDVVGLATVVNAFAEEWECVFGAAETLEEKARLASMARHAAKLYVRERCQLPVRVVTHLYDGLRHLKNHGTFRVAGMTYEELWEKYEKQIRTE--DPTLEDEDLKTRICLRILEKSCSTNRVLNSIS-GCSALNVDGDTSSGGREK 1448
+V++LR+ YG R N+WGDL+ +TR Y LLP + + D D+ L+++A +ASMAR+AAK+Y RERC++P RV + YD R+ G + GMT +++W KYE++I++E + ED+ K+ + RIL KSCSTN ++ ++ G L GD S EK
Sbjct: 104 TVNILRQEYGERANWWGDLSSRQTRLLYQRLLPRVILSE----------------DEFQDL----------------------PLKDRAYIASMARYAAKIYARERCRVPGRVAANFYDATRYAIRTGRWSWTGMTVDDIWNKYEREIKSELGEDVTEDKLYKS-LYERILSKSCSTNPFIDQLTLGPGKLRDLGDGDSSTEEK 268 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7.18165.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig7.18165.1 >prot_F-serratus_M_contig7.18165.1 ID=prot_F-serratus_M_contig7.18165.1|Name=mRNA_F-serratus_M_contig7.18165.1|organism=Fucus serratus male|type=polypeptide|length=454bp MLFILILLFFPCALVGAFVTADEHDLTITAFQTAGHFFFEPLTGAYRSRSback to top mRNA from alignment at F-serratus_M_contig7:1613127..1619745+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig7.18165.1 ID=mRNA_F-serratus_M_contig7.18165.1|Name=mRNA_F-serratus_M_contig7.18165.1|organism=Fucus serratus male|type=mRNA|length=6619bp|location=Sequence derived from alignment at F-serratus_M_contig7:1613127..1619745+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig7:1613127..1619745+ >mRNA_F-serratus_M_contig7.18165.1 ID=mRNA_F-serratus_M_contig7.18165.1|Name=mRNA_F-serratus_M_contig7.18165.1|organism=Fucus serratus male|type=CDS|length=2724bp|location=Sequence derived from alignment at F-serratus_M_contig7:1613127..1619745+ (Fucus serratus male)back to top |