mRNA_F-serratus_M_contig124.1829.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig124.1829.1
Unique NamemRNA_F-serratus_M_contig124.1829.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig124.1829.1 vs. uniprot
Match: D7G688_ECTSI (ADP,ATP carrier protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G688_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 3.490e-39
Identity = 79/92 (85.87%), Postives = 82/92 (89.13%), Query Frame = 2 
Query:  215 GLIRLRDAVFPIYGCQEISKFLALGAIQFFIIFVLTLTRDLKDTLIITSCGAEAISFLKVYGVLPAVTVFFLCYSKISNLLSKRALFYVTAL 490
            GL RLRDA+FPIYG +E  KFLALG IQFFIIFVLTLTRDLKDTLIITSCGAEAISFLKVYGVLPA TVF L YSK+S LLSKRALFY TAL
Sbjct:    8 GLGRLRDALFPIYGGEETGKFLALGGIQFFIIFVLTLTRDLKDTLIITSCGAEAISFLKVYGVLPAATVFMLAYSKVSTLLSKRALFYATAL 99
[Close]
BLAST of mRNA_F-serratus_M_contig124.1829.1 vs. uniprot
Match: A0A7S1Z3I4_9STRA (ADP,ATP carrier protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z3I4_9STRA)

HSP 1 Score: 117 bits (293), Expect = 6.980e-31
Identity = 55/91 (60.44%), Postives = 75/91 (82.42%), Query Frame = 2 
Query:  218 LIRLRDAVFPIYGCQEISKFLALGAIQFFIIFVLTLTRDLKDTLIITSCGAEAISFLKVYGVLPAVTVFFLCYSKISNLLSKRALFYVTAL 490
            L ++RDAVFPIYG  E++ FL LG+++FFIIF+LTLTRD KDTL++T CGAEAI+FLKVYGVLPA T F   +++ S++ S++ LFY+T +
Sbjct:    3 LAKVRDAVFPIYGKDEMNLFLLLGSLKFFIIFILTLTRDTKDTLVVTQCGAEAIAFLKVYGVLPAATAFIAAFAQASSVYSRQKLFYITCI 93
[Close]
BLAST of mRNA_F-serratus_M_contig124.1829.1 vs. uniprot
Match: A0A1Z5KN04_FISSO (ADP,ATP carrier protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KN04_FISSO)

HSP 1 Score: 124 bits (310), Expect = 5.360e-30
Identity = 60/91 (65.93%), Postives = 72/91 (79.12%), Query Frame = 2 
Query:  218 LIRLRDAVFPIYGCQEISKFLALGAIQFFIIFVLTLTRDLKDTLIITSCGAEAISFLKVYGVLPAVTVFFLCYSKISNLLSKRALFYVTAL 490
            L R R AVFPIYG  EI+KFL +GAI+FF+I  LTLTRD KDTLI+T CGAEAI+FLK+YGVLPA T F   YSK+SN + K+ LFY+T +
Sbjct:   77 LSRARQAVFPIYGSHEITKFLLIGAIKFFVILALTLTRDTKDTLIVTQCGAEAIAFLKIYGVLPAATAFIALYSKLSNSVGKKTLFYITCI 167
[Close]
BLAST of mRNA_F-serratus_M_contig124.1829.1 vs. uniprot
Match: B7FWL8_PHATC (ADP,ATP carrier protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FWL8_PHATC)

HSP 1 Score: 122 bits (307), Expect = 1.410e-29
Identity = 60/93 (64.52%), Postives = 74/93 (79.57%), Query Frame = 2 
Query:  212 GGLIRLRDAVFPIYGCQEISKFLALGAIQFFIIFVLTLTRDLKDTLIITSCGAEAISFLKVYGVLPAVTVFFLCYSKISNLLSKRALFYVTAL 490
            G L ++R AVFPIYG QE++KFL +G+I+FFII  LTLTRD KDTLI+T CGAEAI+FLK+YGVLPA T F   YSK+SN + K+ LFY T +
Sbjct:   80 GALRKVRQAVFPIYGNQEVTKFLLIGSIKFFIILALTLTRDTKDTLIVTQCGAEAIAFLKIYGVLPAATAFIALYSKMSNAMGKKMLFYSTCI 172
[Close]
BLAST of mRNA_F-serratus_M_contig124.1829.1 vs. uniprot
Match: A0A7S2P7Y9_9STRA (ADP,ATP carrier protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P7Y9_9STRA)

HSP 1 Score: 122 bits (305), Expect = 1.770e-29
Identity = 60/89 (67.42%), Postives = 73/89 (82.02%), Query Frame = 2 
Query:  224 RLRDAVFPIYGCQEISKFLALGAIQFFIIFVLTLTRDLKDTLIITSCGAEAISFLKVYGVLPAVTVFFLCYSKISNLLSKRALFYVTAL 490
            +LRDA+FP+YG  EI KFL LG+++FFII VLTLTRD KDTLI+T CGAEAI+FLK+YGVLP+   F   YSK SN+LSK+ALFY T +
Sbjct:   21 KLRDAIFPVYGRNEIIKFLLLGSMKFFIIMVLTLTRDTKDTLIVTQCGAEAIAFLKIYGVLPSAVAFTAIYSKASNILSKQALFYSTCI 109
[Close]
BLAST of mRNA_F-serratus_M_contig124.1829.1 vs. uniprot
Match: A0A7S2HYL0_9STRA (ADP,ATP carrier protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HYL0_9STRA)

HSP 1 Score: 114 bits (285), Expect = 2.510e-29
Identity = 64/143 (44.76%), Postives = 92/143 (64.34%), Query Frame = 2 
Query:   68 ITTLSDSHNQPRKIYRRKIFASQRIKPSAVLRGGSTG--VAMQQGRSPKEGGLIRLRDAVFPIYGCQEISKFLALGAIQFFIIFVLTLTRDLKDTLIITSCGAEAISFLKVYGVLPAVTVFFLCYSKISNLLSKRALFYVTAL 490
            I  L   + Q   + +  +   QR  P  V RGGS    +  +  +  +E  L ++R  VFPI+G +E+ KFL +G+I+FFII  LTLTRD KDT+++T CGAEAI+FLK+YGVLPA T F   YSK++++L K+ LF+ T +
Sbjct:   16 IKRLHSDNKQDNHLGKSMMTLRQRTSPEKV-RGGSESQPIDNEPTQQQQESYLKKIRRTVFPIHG-KEVHKFLLIGSIKFFIIMALTLTRDTKDTMVVTQCGAEAIAFLKIYGVLPAATAFIALYSKMASILDKKTLFFSTCI 156
[Close]
BLAST of mRNA_F-serratus_M_contig124.1829.1 vs. uniprot
Match: A0A7S3UYU3_HETAK (ADP,ATP carrier protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UYU3_HETAK)

HSP 1 Score: 120 bits (302), Expect = 6.940e-29
Identity = 73/134 (54.48%), Postives = 87/134 (64.93%), Query Frame = 2 
Query:  119 KIFASQRIKPSAVLRGGST------GVAMQQGRS-----PKEGGLIRLRDAVFPIYGCQEISKFLALGAIQFFIIFVLTLTRDLKDTLIITSCGAEAISFLKVYGVLPAVTVFFLCYSKISNLLSKRALFYVTA 487
            K F  Q +K     RG ++      G  +QQG       PK  G  RLRDA+FPIYG  E+ KF  +  I FFI+FVL +TRD KDTL++TSCGAEAISFLK+YGVLPA T+F L YSK S +LSK  LFY TA
Sbjct:   49 KTFLVQ-LKGGVTSRGNNSNSEIRLGSKVQQGDETLPVKPKTKG-SRLRDALFPIYGSHELKKFFTISMINFFIVFVLVITRDAKDTLVVTSCGAEAISFLKLYGVLPAATLFMLGYSKASTVLSKPRLFYGTA 180
[Close]
BLAST of mRNA_F-serratus_M_contig124.1829.1 vs. uniprot
Match: A0A7S3V8I3_9STRA (ADP,ATP carrier protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V8I3_9STRA)

HSP 1 Score: 119 bits (297), Expect = 3.840e-28
Identity = 58/89 (65.17%), Postives = 72/89 (80.90%), Query Frame = 2 
Query:  224 RLRDAVFPIYGCQEISKFLALGAIQFFIIFVLTLTRDLKDTLIITSCGAEAISFLKVYGVLPAVTVFFLCYSKISNLLSKRALFYVTAL 490
            + RDAVFPIYG  E+ KFL +GAI+FF+I  LTLTRDLKDTL++T CGAEAI+FLK+YGVLPA T F   YSK+S+++ KR LFY T +
Sbjct:  141 KFRDAVFPIYG-DEVKKFLLMGAIKFFVIMALTLTRDLKDTLVVTQCGAEAIAFLKIYGVLPAATSFIALYSKMSSVMEKRQLFYTTCI 228
[Close]
BLAST of mRNA_F-serratus_M_contig124.1829.1 vs. uniprot
Match: A0A7S4JV62_9STRA (ADP,ATP carrier protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JV62_9STRA)

HSP 1 Score: 118 bits (296), Expect = 4.060e-28
Identity = 62/115 (53.91%), Postives = 80/115 (69.57%), Query Frame = 2 
Query:  161 RGGST-----GVAMQQGRSPKEGGLIRLRDAVFPIYGCQEISKFLALGAIQFFIIFVLTLTRDLKDTLIITSCGAEAISFLKVYGVLPAVTVFFLCYSKISNLLSKRALFYVTAL 490
            RGGS+      VA     +P+   L R R  VFPIYG +E  KF  +G+I+FF+I  LTLTRDLKDT+++T CGAEAISFLK+YGVLPA T F   YSK++++L K+ LFY T +
Sbjct:    5 RGGSSTAAAADVATAAPAAPEMSSLARFRRTVFPIYGREEAKKFFLVGSIKFFVIMALTLTRDLKDTMLVTQCGAEAISFLKIYGVLPAATGFIALYSKMASVLDKKTLFYTTCI 119
[Close]
BLAST of mRNA_F-serratus_M_contig124.1829.1 vs. uniprot
Match: A0A7S1ZBM2_9STRA (ADP,ATP carrier protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZBM2_9STRA)

HSP 1 Score: 116 bits (291), Expect = 2.520e-27
Identity = 55/111 (49.55%), Postives = 80/111 (72.07%), Query Frame = 2 
Query:  158 LRGGSTGVAMQQGRSPKEGGLIRLRDAVFPIYGCQEISKFLALGAIQFFIIFVLTLTRDLKDTLIITSCGAEAISFLKVYGVLPAVTVFFLCYSKISNLLSKRALFYVTAL 490
            +RGG +  A    +  ++  L ++R  +FPIYG  E+ KFL +G+I+FFII  LTLTRD KDT+++T CGAEAI+FLK+YGVLPA T F   YSK+++++ K+ LF+ T +
Sbjct:   92 IRGGESESAPNNEKQQQQSYLKKIRRTIFPIYGKDEVHKFLLIGSIKFFIIMALTLTRDTKDTMVVTQCGAEAIAFLKIYGVLPAATAFIAFYSKMASIMEKKTLFFSTCI 202
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig124.1829.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G688_ECTSI3.490e-3985.87ADP,ATP carrier protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1Z3I4_9STRA6.980e-3160.44ADP,ATP carrier protein (Fragment) n=1 Tax=Ditylum... [more]
A0A1Z5KN04_FISSO5.360e-3065.93ADP,ATP carrier protein n=2 Tax=Fistulifera solari... [more]
B7FWL8_PHATC1.410e-2964.52ADP,ATP carrier protein n=2 Tax=Phaeodactylum tric... [more]
A0A7S2P7Y9_9STRA1.770e-2967.42ADP,ATP carrier protein n=1 Tax=Leptocylindrus dan... [more]
A0A7S2HYL0_9STRA2.510e-2944.76ADP,ATP carrier protein (Fragment) n=1 Tax=Helicot... [more]
A0A7S3UYU3_HETAK6.940e-2954.48ADP,ATP carrier protein (Fragment) n=1 Tax=Heteros... [more]
A0A7S3V8I3_9STRA3.840e-2865.17ADP,ATP carrier protein (Fragment) n=1 Tax=Chaetoc... [more]
A0A7S4JV62_9STRA4.060e-2853.91ADP,ATP carrier protein n=1 Tax=Odontella aurita T... [more]
A0A7S1ZBM2_9STRA2.520e-2749.55ADP,ATP carrier protein n=1 Tax=Ditylum brightwell... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig124contigF-serratus_M_contig124:566504..572574 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size494
Cds size492
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929162.2392771-CDS-F-serratus_M_contig124:566505..5666061622929162.2392771-CDS-F-serratus_M_contig124:566505..566606Fucus serratus maleCDSF-serratus_M_contig124 566506..566606 -
1690962729.936783-CDS-F-serratus_M_contig124:566505..5666061690962729.936783-CDS-F-serratus_M_contig124:566505..566606Fucus serratus maleCDSF-serratus_M_contig124 566506..566606 -
1622929162.2513995-CDS-F-serratus_M_contig124:572183..5725741622929162.2513995-CDS-F-serratus_M_contig124:572183..572574Fucus serratus maleCDSF-serratus_M_contig124 572184..572574 -
1690962729.9508069-CDS-F-serratus_M_contig124:572183..5725741690962729.9508069-CDS-F-serratus_M_contig124:572183..572574Fucus serratus maleCDSF-serratus_M_contig124 572184..572574 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig124.1829.1prot_F-serratus_M_contig124.1829.1Fucus serratus malepolypeptideF-serratus_M_contig124 566506..572574 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig124.1829.1

>prot_F-serratus_M_contig124.1829.1 ID=prot_F-serratus_M_contig124.1829.1|Name=mRNA_F-serratus_M_contig124.1829.1|organism=Fucus serratus male|type=polypeptide|length=164bp
ACYSLLSTLGQSKPSWGRRCVADHNAQRLPQSASQNLPEENLRFTKNQAK
RRFEGWKHGCCDAAGTITEGRRTHTPQGCRVPYLWLPRDQQILGLGSHSV
FYNLRAHAHKGLEGHAYYHVVRRGGHFLPEGLRRPPRGDGVLSLLLQDIQ
PALQEGALLCDGVA
back to top

mRNA from alignment at F-serratus_M_contig124:566504..572574-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig124.1829.1 ID=mRNA_F-serratus_M_contig124.1829.1|Name=mRNA_F-serratus_M_contig124.1829.1|organism=Fucus serratus male|type=mRNA|length=6071bp|location=Sequence derived from alignment at F-serratus_M_contig124:566504..572574- (Fucus serratus male)
GCTTGTTATTCGCTTCTCTCCACCCTTGGCCAGTCGAAACCTAGCTGGGG
CCGCCGTTGCGTCGCCGATCACAACGCTCAGCGACTCCCACAATCAGCCT
CGCAAAATTTACCGGAGGAAAATCTTCGCTTCACAAAGAATCAAGCCAAG
CGCCGTTTTGAGGGGTGGAAGCACGGGTGTTGCGATGCAGCAGGGACGAT
CACCGAAGGAAGGCGGACTCATACGCCTCAGGGATGCCGTGTTCCCTATC
TATGGCTGCCAAGAGATCAGCAAATTCTTGGCCTTGGGAGCCATTCAGTT
TTTTATAATCTTCGTGCTCACGCTCACAAGGGACTTGAAGGACACGCTTA
TTATCACGTCGTGCGGCGCGGAGGCCATTTCCTTCCTGAAGGTACAGACA
GTATGATGTTGTGTTCAGCTTTTGTTGCTCCTGTTTGACTTTTACCCTGT
GTTACCTTACCACACTCTTCTGTCATTTTGGCATGCGCCTTCTCTTGGAC
ATTACTACAGTAGTTCTGTCTGTACGCTTTGCAATCATCAGGCGCGAACG
GGGACAGGGAAATATAATTTTTTCCTGTTTATCTTACCACATTTGATAAC
CTTACCCGGTTGATCTATACTCTCCAACATGTCATTCCCATAGTTTATAC
ATTAATAACATAAATAAATATTTAGCGGACTGATGCGGAACGAGACAGCC
GAGCATCTCTCGCCAGACGCAAATTATCAATTATCTCGCAAAATGGGAAC
AGGAAAATGCTTCAGTCCTGCCGAGATCAGATTGGCTAATCATAACGCAA
CGACTGGCGCCCAATCTGCTGAAAGTAATGACCAGAGAGTCATTCTAGCA
AGCACCCTTACACCCACTCTACTAGAGATAGGACAGAGACATTACTGTAG
TACAGGTACAACAGTACGGTACTGGTGTACAGTTAGTATTACTGCTGTTC
ATTATTACTGCTGTTCAATATTACTCCTGTACAGCAAAAAACTCCGGGGC
CGCACCATAAAACTCTGGGATCTGTCCACGTCATCGCTCAAGACAATAGC
AAGTTGAGAGAGGGCAAAGCCCTCGATCGAGCAATACTGCACCGCCGTTA
CTTTCAACATGCCCACTTCATACCAATAGTGGGGGTGGGAAAGAGAGGCG
AATATTAACTGGTCCATAGTGACCTGCTAAGGCAGCACTCGTTCGGAACT
ACCTTGAGGTTTACTGGCCCTGTGCCGGCGGACTCTCGGCAGTGAACGCC
ATCGGTACGCAATTGCGTGACCCGATAAAGATAAACTCGGGACTGACCCG
ATGGCGTATGGCGGTTTCATAAATGGACGCCGCCGCGGAACTCGGGAGGA
ATCCCGTAAGTAAGCACCAGATTCAGCCTGAGTATGGAGATGAGCAGGCT
GACGCGGGACGGGACGGCTGAACCCGTCTCGCGAGACCAAATTCTCAGGC
ACGCACGGGGACAGGGGAATATTCATTTTCCCTGTTCAGCTGACCACGAG
CAGGATTGGCAACCATACCTGGTTGATCCATACTCTGCTATATGTGATGA
CCATACATACATACATACATACTGTAATGTACTGTACCATCATTACGTCC
AGTTTTGAGGATCATCTACCGGTGTTCCAGTACGACAGGGGGTACGTTCA
CATGGGGAAATACTCCGAAGTTTTGGAAAGTTCGGGGAAAAGGTCGACTG
TAGTTTCGAGTCTTTTTCCAACATGTTCGCACGTTGAAAATAATATATCT
TCGTATTTCGCGTGTTTTGGTAACATCTTGTTCTACCATAATCAACGATA
TGTATGTACAACTAACAGTAGCTGCTGTTATAAAAATGATACAAGTACAA
GCTCGTCGTCCAAGGGGCTGCACTAAACCGCCGCTACTTTCAACATGCCC
ACTTCATACCAATAGTGGGCGTGGGAAAGAGAGGCGCATATTGATTGGCC
CATGGTGACCCGCCAAGGCAGCACTAGTTCGGAACTACCTTGAGGTTTAC
TGGCCTTGTGCCGGCGGACTCTCGGCAGTGAGCGACATCGGTACGCAACT
GCGTGACCCGATAAACTCGGGACTGACCCAATGGCTTATGACGGTTTCAT
AAATGGACGCCGTCGCGGAACTCGGGAGGAATCCCGTAAGTAAGCACCAG
ATTCAGCCTGAGTATGGAGATGAGCAGGCTGACGCGGGACGGGACTGTCG
GAACCGTCTCGCGAGACCAAATTCTCAGGCACGTTCGGGGACAGGGGAAT
ATTCATTTTCCCTGTTCAGCTGACCACGAGCAGGATTGGCAACTTTACCC
GGTTGATCCATACTCTGCTATATGTGATGACCATACATACATACATACTA
CAGGGTTTCGGCGCGCGGCATGGACAGGAGTTGGTGCGAAAGAAACGATT
TATGTTGTATGTATGCTTTATCGAACTTACCAAAGCGTACGACTCCGGTG
ACCGAACCCTCCTCTGGACAGTACTCGCCCGTTTTGGCGTGCCACAAAAT
ATGATCTCGGTCATTCGTCAATTCCACGACAGCATGTGAGCATGCGTGAG
GCTCGACGGCAGGGTGTGCTCGGGGTGGTTCGCTGTAGGGCAGGGCCTTC
GTCAAGGGTGCGCGCTCGCGCCCCTCTTGTTCAACATCTGCTTCGCGGCG
GATATAAACGTGGCCTATACGCGTTTCAAGGCAGACAAAAACATCATGGG
CGCTTTGGTGCACCTGAGGGGAAAAGGGGGGATGGTTGGGCAGGGGGAAG
CAACTGCCGGGGATCCAGCCCTTGCGACGTTGCTTTGGGGCATGCTTTAC
GCTGACGATGCCGGGGTCGTCTCGCAATCGTCCGAGCAGCTGAGGAAGAT
AATAGGGGTGATCGTAGTCGTGCGCGCGACCTCTGACCTCACCGTATCGG
AGGCCAACACTGAGATCATGTGTTAAGGCACGAAGGGGGTGCCAGAGTCT
ACCGTCATATTCAACGTAGAAGCACCGGGCCAGGTGTAGAATCAAACGAA
CGAGTTCGTATACCTCGGGGGAAACGTCAACCACAATGCCGACCTGTCCA
TGGAGGTCGACCGGCGCATACGCAACGCATGGTGCAGCTTCCGGAACTAT
ACCCTCGAACTGCACGACCGATCGAGCGCTCTCCTCGAGCTCAAAGTCCG
GATGCTCAGAGCCGAGGTACTCAAAGACAAGAGCCCGCGCGCGTGCCACT
ACGACACGCTGCGCTGAGCCCACCACAGCTTCCTACTCGCTGCATCGGTT
GGCGAAAGAACAATCGCGCCGACCACCCTATTTCCTATCTGGACACGCTT
ATTAAGAGGGGAGGTAAGAGCACCGAGGTGAATCTTGTTCGCGAGATTTG
TGGCGCGCATGGAGGATACGAGACTGCCGAAGTGCGTGATTTTCGGGAAA
CTGGTGGGGAGCGCAGGCTGCGTTGGGGGCCAGGAAAAAGAGTGGATGGC
GTGTTTCCTGGACGACCTCAGAGCTTTCGGCATCAACGCCGACAAGCGGA
CGGGTGCAGCCCAGGTCGAGGGGGAATGACGCAAGACGGCGGAACAAGGG
GCGATACGTTTTATGGTGAAATGGATCGCTGCCGAGAAAGCCAGGGCTGG
ACTGCGGCATGCAGTAGTATGCCCGAACGTGACGGGAAGGTGATGATATG
ATAGCCCAAAGCAAGCGTGCTCATGCTGGTTCGCTCGCTATAGTTGACTA
GCCACAAGTGGCGCGAACTTGTACCCTCCGGGCGTTTCGTTGGCAGATGT
CATGTCATGTCTTCCTCTGATGTTACGTTTGTTTTATTATTTTTGTTTCG
TTTTCGTCCTTGTTGTTTTTGTCAAAGCCGTGGGTGGTCCTTCGTTCAAT
CGTTTCTTCGGAGGTGTAGTGTCGCTTTTTCCGAGTAATCTATATAGCAT
TGGCGTTTTTCTCGTTTGTATGGAGAGTACCTTGTACGTTTTCCCTCCGA
AGGGTGTTTTCCTACCTTGTGACCACACGGACTGGATTTTGACATAAGCT
AATGTAAGAATTTTAATCAATCAATCAATCAATGAACTATGGCTGGAGGA
CCACCCCAAGAAATTGAGAGAAAATGGGACTCTCGGGGTTGTGCTGCTCG
ACCTTCGACCGCGCTGGTGCAGACAAACTTTGCTGTGGAACCTGTGGACC
TCGCAATGATACATTTTTTTCGGGTGCGGTCGATCCAGGCATACATGCAA
AGCCCGCGAACGAGTTTCTGACAACGAGGTACGTGTGACGACCGCCATGG
TTTTTATCCACTCGGGATACAGCGTAGTCAACCAGATATCAGACTAAGTG
GTCGAACGGGACCCCGGGAGGCGTTTTCTCCGAGGTTAGGCATTCCAAAC
TTTGGAAATTACAACAGCGAAAGAGCTATATAGCAACACCCTGTTCCCAA
ATTTTGGAAATCTTGGAAGGGTTTCCGGAGGCGTTTTTTCAAAGTTTTAG
AAAATACTGTATTGGACTATTTCTGACCGACCCCAGCAACAAGTGTGCTA
ACCTCCCTGTGGAACAGCGCCTCTTGATATCGTAACATACCTTGGCACTT
CAATTTTTTATTGGGACGTGTACTACTGCAGTCATCAGCCGTCCGGAATG
TAGATATTATATTCTGTATCTTCCATTGGTGGGTAGCACGAGTACCTACA
TGGCGATTGGTGTAGAGCTAAGGCTACCGCTCTCCCCTATTCTACTTTGT
TGACCGTGTCCGACTACGTGATTTGAGAAAATCGACCAAATCTCATCTGA
AAAGTTTGTAATACGTTCAATCGCCAACGGTTAAAGAGCACTGGATTGCT
TCGCCCGCGGACAGAAAAACGCGAGCGCCGATCAATCGCGCGCACGTACC
CTTCAAAAAGTGTAACCTCATGCTGGCCTACATCGTCCCACGCGCGCACG
TACATCATCGTCCTCGCGGACGTACACCTTCTCCCGCACCCACGCACTTG
CACCCCTCGAGTGCACGTACACCTACCTGCCTGGCTTCCACACGCATCAT
CCATCAGACCTTCGCACGCTACCCTGAGCGCGCACGCAAGCCGTTCTAAG
ACGCACGCTAACCGCTCGGGCCGCAATCGACCGTCCATTTCTTGCGCCAA
CACCCCCAGTGAAGAGAGTTTTCTTTAACGCGTGCAGTGTTTCCTTAAAA
TTGCGCATTCCTTCCGTCGCGCGTTTGGCAGCCGCACCTTTCGCGCTTAC
ACATCACCTCCTCCGGGCGCGTATGCCCTCCTCTGGGGCACCTTCCTCGC
CCACCGCACGCACGCAGATCACGAGTCCTTGCATGTTAGGGTCAATTTGC
TACGGTCACAAGCGTTTCTTTATCTCTCCGTGTACATCCCTCTGACGGTC
GGACAAAAACCTCTCAGGACATATCGCTATGTGACCGGCAGCGAAACATG
CTTTTATAGCGCCATTGTGTCACCAGATCGGGTGATGCCCGGGACTACAG
CAGTGCGATACGCTCACCGAAACTTTTTGAGTGCGCCAAATGCTGTAGTC
GTAGCTGTATTATAGAGATGTATAATCGTCGCCCGAGTGGTCTAGTAGGT
AACCTGCATACCTGCTAGTGCGGAAGTCGTGAGTTCGATTCTTAGCTTAA
GCATAATTTGTGTTCTTTCTTTCGTAATGGAAAGCTTGGGAACGTGAGTA
AGTAAAATTCAACCATTGGTTGACGAGTTGTAAGAGTGCTGAACTCGCAT
CGCTATAAAAATTGTAAGGCGTGAACCGGGGAGAGATGGCAAGATCCTTT
GTGACCACAGGCAGGATGGTAATTAGAGGTCCATCGGCTATAAGTGTGCT
TAAAAAATAAAAAAATAAAAAAATAGAGGTGTTTCGGGAGGATAAATGAC
GCCTGTAACAGCGATCCGTCATTTCCCCTTCTGTCAAAATTTCAATGCCT
TACCGACTGCCACCTCCAATGGTGATTGCCCCCCCCCCCCCCTTCCCTCC
CTCTGTGACATGTGACAGGTTTACGGCGTCCTCCCCGCGGTGACGGTGTT
CTTTCTCTGCTACTCCAAGATATCCAACCTGCTCTCCAAGAGGGCGCTCT
TTTATGTGACGGCGTTGCCCT
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig124:566504..572574-

>mRNA_F-serratus_M_contig124.1829.1 ID=mRNA_F-serratus_M_contig124.1829.1|Name=mRNA_F-serratus_M_contig124.1829.1|organism=Fucus serratus male|type=CDS|length=984bp|location=Sequence derived from alignment at F-serratus_M_contig124:566504..572574- (Fucus serratus male)
GCTTGTTATTCGCTTCTCTCCACCCTTGGCCAGTCGAAACCTAGCTGGGG
CCGCCGTTGCGTCGCCGATCACAACGCTCAGCGACTCCCACAATCAGCCT
CGCAAAATTTACCGGAGGAAAATCTTCGCTTCACAAAGAATCAAGCCAAG
CGCCGTTTTGAGGGGTGGAAGCACGGGTGTTGCGATGCAGCAGGGACGAT
CACCGAAGGAAGGCGGACTCATACGCCTCAGGGATGCCGTGTTCCCTATC
TATGGCTGCCAAGAGATCAGCAAATTCTTGGCCTTGGGAGCCATTCAGTT
TTTTATAATCTTCGTGCTCACGCTCACAAGGGACTTGAAGGACACGCTTA
TTATCACGTCGTGCGGCGCGGAGGCCATTTCCTTCCTGAAGGCTTGTTAT
TCGCTTCTCTCCACCCTTGGCCAGTCGAAACCTAGCTGGGGCCGCCGTTG
CGTCGCCGATCACAACGCTCAGCGACTCCCACAATCAGCCTCGCAAAATT
TACCGGAGGAAAATCTTCGCTTCACAAAGAATCAAGCCAAGCGCCGTTTT
GAGGGGTGGAAGCACGGGTGTTGCGATGCAGCAGGGACGATCACCGAAGG
AAGGCGGACTCATACGCCTCAGGGATGCCGTGTTCCCTATCTATGGCTGC
CAAGAGATCAGCAAATTCTTGGCCTTGGGAGCCATTCAGTTTTTTATAAT
CTTCGTGCTCACGCTCACAAGGGACTTGAAGGACACGCTTATTATCACGT
CGTGCGGCGCGGAGGCCATTTCCTTCCTGAAGGTTTACGGCGTCCTCCCC
GCGGTGACGGTGTTCTTTCTCTGCTACTCCAAGATATCCAACCTGCTCTC
CAAGAGGGCGCTCTTTTATGTGACGGCGTTGCCGTTTACGGCGTCCTCCC
CGCGGTGACGGTGTTCTTTCTCTGCTACTCCAAGATATCCAACCTGCTCT
CCAAGAGGGCGCTCTTTTATGTGACGGCGTTGCC
back to top