mRNA_F-serratus_M_contig7.18151.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig7.18151.1 vs. uniprot
Match: D7FLD8_ECTSI (Mitochondrial import inner membrane translocase TIM14 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLD8_ECTSI) HSP 1 Score: 142 bits (359), Expect = 2.560e-41 Identity = 70/76 (92.11%), Postives = 74/76 (97.37%), Query Frame = 1
Query: 1 GLFGAFGKRYYEGGFDEKMTRKEAALILGVRESAAAQRIKDSHRRILMINHPDKGGSKYMAAKINEAKEILLKGRE 228
G FGAFGKR+Y+GGF+EKMTRKEAALILGVRESA AQRIKDSHRRILMINHPDKGGSKYMAAKINEAKEILLKGR+
Sbjct: 134 GFFGAFGKRHYDGGFEEKMTRKEAALILGVRESATAQRIKDSHRRILMINHPDKGGSKYMAAKINEAKEILLKGRK 209
BLAST of mRNA_F-serratus_M_contig7.18151.1 vs. uniprot
Match: K8Z3F4_NANGC (Chaperone-domain containing protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z3F4_NANGC) HSP 1 Score: 118 bits (296), Expect = 1.450e-31 Identity = 55/70 (78.57%), Postives = 66/70 (94.29%), Query Frame = 1
Query: 16 FGKRYYEGGFDEKMTRKEAALILGVRESAAAQRIKDSHRRILMINHPDKGGSKYMAAKINEAKEILLKGR 225
F KR+YEGGF++KMTR+EAALILGVRESA+ QRIK++HRRILM+NHPD GGS Y+A+KINEAKE+LLKGR
Sbjct: 160 FAKRFYEGGFEDKMTRREAALILGVRESASPQRIKEAHRRILMLNHPDTGGSTYLASKINEAKELLLKGR 229
BLAST of mRNA_F-serratus_M_contig7.18151.1 vs. uniprot
Match: A0A835YPD5_9STRA (Mitochondrial import inner membrane translocase TIM14 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPD5_9STRA) HSP 1 Score: 117 bits (292), Expect = 7.220e-31 Identity = 55/69 (79.71%), Postives = 64/69 (92.75%), Query Frame = 1
Query: 22 KRYYEGGFDEKMTRKEAALILGVRESAAAQRIKDSHRRILMINHPDKGGSKYMAAKINEAKEILLKGRE 228
KR+Y+GGF+E MTR+EAALILGVRESA+ QRIKD+HRRILM+NHPD+GGS YMA KIN AKEILLKG+E
Sbjct: 171 KRFYDGGFEETMTRREAALILGVRESASPQRIKDAHRRILMLNHPDRGGSTYMAGKINAAKEILLKGKE 239
BLAST of mRNA_F-serratus_M_contig7.18151.1 vs. uniprot
Match: A0A7S2JUU2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JUU2_9STRA) HSP 1 Score: 116 bits (290), Expect = 1.340e-30 Identity = 53/70 (75.71%), Postives = 65/70 (92.86%), Query Frame = 1
Query: 19 GKRYYEGGFDEKMTRKEAALILGVRESAAAQRIKDSHRRILMINHPDKGGSKYMAAKINEAKEILLKGRE 228
G +YYEGGF++KMTR+EAALILGVRESA +RIKD+HR+IL++NHPD GGS YMA+KINEAKE+LLKG+E
Sbjct: 167 GSKYYEGGFEDKMTRREAALILGVRESATVKRIKDAHRKILILNHPDTGGSTYMASKINEAKELLLKGKE 236
BLAST of mRNA_F-serratus_M_contig7.18151.1 vs. uniprot
Match: A0A7S2Q5G3_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q5G3_9STRA) HSP 1 Score: 112 bits (281), Expect = 6.160e-29 Identity = 51/70 (72.86%), Postives = 65/70 (92.86%), Query Frame = 1
Query: 19 GKRYYEGGFDEKMTRKEAALILGVRESAAAQRIKDSHRRILMINHPDKGGSKYMAAKINEAKEILLKGRE 228
G +YYEGGF+E+MTRKEAALILGVRES+ A+RIK++HR++L++NHPD GGS YMA KINEAKE+LLKG++
Sbjct: 199 GAKYYEGGFEEQMTRKEAALILGVRESSTAKRIKEAHRKLLILNHPDTGGSTYMAGKINEAKELLLKGKK 268
BLAST of mRNA_F-serratus_M_contig7.18151.1 vs. uniprot
Match: A0A7S3DS72_9STRA (Hypothetical protein n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DS72_9STRA) HSP 1 Score: 110 bits (274), Expect = 1.210e-28 Identity = 49/69 (71.01%), Postives = 62/69 (89.86%), Query Frame = 1
Query: 19 GKRYYEGGFDEKMTRKEAALILGVRESAAAQRIKDSHRRILMINHPDKGGSKYMAAKINEAKEILLKGR 225
G +YYEGGF++ MTR+EAALILGVRES+ A RIKD+HR++L++NHPD GGS YMA KINEAKE+L+KG+
Sbjct: 126 GSKYYEGGFEDSMTRREAALILGVRESSPASRIKDAHRKLLILNHPDTGGSTYMAGKINEAKELLMKGK 194
BLAST of mRNA_F-serratus_M_contig7.18151.1 vs. uniprot
Match: A0A482S026_9ARCH (J domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S026_9ARCH) HSP 1 Score: 109 bits (273), Expect = 1.760e-28 Identity = 47/71 (66.20%), Postives = 66/71 (92.96%), Query Frame = 1
Query: 16 FGKRYYEGGFDEKMTRKEAALILGVRESAAAQRIKDSHRRILMINHPDKGGSKYMAAKINEAKEILLKGRE 228
F + +Y+GGF+EKMT++EAALILGVRESAA +R+K++HRR+L++NHPDKGGS ++ AKINEAK++LLKG++
Sbjct: 125 FARNFYDGGFEEKMTKREAALILGVRESAAVERVKEAHRRMLILNHPDKGGSVFITAKINEAKDLLLKGKQ 195
BLAST of mRNA_F-serratus_M_contig7.18151.1 vs. uniprot
Match: A8J0E8_CHLRE (Presequence translocase-associated protein import motor subunit n=3 Tax=Chlamydomonas TaxID=3052 RepID=A8J0E8_CHLRE) HSP 1 Score: 106 bits (265), Expect = 3.120e-28 Identity = 47/72 (65.28%), Postives = 63/72 (87.50%), Query Frame = 1
Query: 1 GLFGAFGKRYYEGGFDEKMTRKEAALILGVRESAAAQRIKDSHRRILMINHPDKGGSKYMAAKINEAKEILL 216
GLF + G++YY+GGF +MTR+EAALILG+RESA +R+KD+HRRI++ NHPD GGS Y+AAK+NEAK++LL
Sbjct: 33 GLFNSVGRQYYKGGFLPEMTRREAALILGIRESAGEERVKDAHRRIMVANHPDSGGSSYVAAKVNEAKDLLL 104
BLAST of mRNA_F-serratus_M_contig7.18151.1 vs. uniprot
Match: F0YBX3_AURAN (J domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YBX3_AURAN) HSP 1 Score: 104 bits (260), Expect = 4.520e-28 Identity = 49/65 (75.38%), Postives = 58/65 (89.23%), Query Frame = 1
Query: 22 KRYYEGGFDEKMTRKEAALILGVRESAAAQRIKDSHRRILMINHPDKGGSKYMAAKINEAKEILL 216
KRYYEG F+ MTR+EAALILGVRESA AQRIKD+HRRIL INHPD GGS +++AK+NEAKE+L+
Sbjct: 1 KRYYEGPFEAAMTRREAALILGVRESATAQRIKDAHRRILRINHPDMGGSAFLSAKVNEAKELLI 65
BLAST of mRNA_F-serratus_M_contig7.18151.1 vs. uniprot
Match: A0A7S3LBB7_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LBB7_9STRA) HSP 1 Score: 108 bits (271), Expect = 7.530e-28 Identity = 48/69 (69.57%), Postives = 63/69 (91.30%), Query Frame = 1
Query: 19 GKRYYEGGFDEKMTRKEAALILGVRESAAAQRIKDSHRRILMINHPDKGGSKYMAAKINEAKEILLKGR 225
G +YYEGGF+E+MTR+EAALILGVRES++ RIKD+HR++L++NHPD GGS Y+A K+NEAKE+LLKG+
Sbjct: 156 GAKYYEGGFEEQMTRREAALILGVRESSSTSRIKDAHRKLLILNHPDTGGSTYIAGKLNEAKELLLKGK 224 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7.18151.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig7.18151.1 >prot_F-serratus_M_contig7.18151.1 ID=prot_F-serratus_M_contig7.18151.1|Name=mRNA_F-serratus_M_contig7.18151.1|organism=Fucus serratus male|type=polypeptide|length=77bp GLFGAFGKRYYEGGFDEKMTRKEAALILGVRESAAAQRIKDSHRRILMINback to top mRNA from alignment at F-serratus_M_contig7:1261495..1261986+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig7.18151.1 ID=mRNA_F-serratus_M_contig7.18151.1|Name=mRNA_F-serratus_M_contig7.18151.1|organism=Fucus serratus male|type=mRNA|length=492bp|location=Sequence derived from alignment at F-serratus_M_contig7:1261495..1261986+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig7:1261495..1261986+ >mRNA_F-serratus_M_contig7.18151.1 ID=mRNA_F-serratus_M_contig7.18151.1|Name=mRNA_F-serratus_M_contig7.18151.1|organism=Fucus serratus male|type=CDS|length=462bp|location=Sequence derived from alignment at F-serratus_M_contig7:1261495..1261986+ (Fucus serratus male)back to top |