mRNA_F-serratus_M_contig7.18150.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig7.18150.1 vs. uniprot
Match: A0A6H5JBS2_9PHAE (SAM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JBS2_9PHAE) HSP 1 Score: 636 bits (1641), Expect = 5.040e-212 Identity = 481/882 (54.54%), Postives = 539/882 (61.11%), Query Frame = 2
Query: 215 VAAIATYLSTMPRQVTRSAARGPLDKLRGPVRKMAEEVFSVDTDRAVLKDEPLLNGLSELQTKQAIKVLETYCANVQRQGSGRIQNKAAYLMSLIQSYKLGPSSG-NPGSAQRLVERLSPAVRRAVEGVFDPVVDRVVLEDRALMELLAKVPEEQALAALKKYRATVQRRGRDAIDNRCGYLIGFLKQYQDGAAVVGPPGSSGQPSRGGSLPLAPSNGDGPYPANSSM-HHSPSVSSGHHSMANCPRNGGPNGSGGPPTVTMAASTXXXXXXXX--------SGGVRPISYLQPPVRKQLEKLFESGKDKAVLEDVGLIKQLARLGEEQALAALKNYKEASKHRRDIHNKSAYLMGILRGYIEGTTPITKAPWEGRGNDDGSDTASSAASVPPSSVASGNRARXXXXXXX----------------------------------------------PTTDDVERTAPNSMPLPQGAPPQQPQLPQQQQSPAPPVASPLSVPVSRELGGFTTAPPQSXXXTSSHEA--------------PHVPLAAIAATPSTSPVNSSPLGGGGLFL------GGIGHSSSNRYDPSSSLLYLEGGSGGRMSGFGSQVNPPDHEEPPRHSSQHEYLFG--HSSGDNNARQQHPLVGPGLLGGDFLVNGGGSDRGLGLSGCLPHAVLPHAGVXXXXXXXXXXXXXXXXXDHFDTSNNFG--------LGNNAPASPGSRSXXXXXXXXXXXXLSAAGSGEESPLGSDAGNDA-----QTVTSXXXXXXSGTSGAGILACNGSTDCTYGGSPRSGEGTENSHSSNSNGGVGGMVDMLARLNLSKYVPVLAEAEVDMDALRLFGEDDLKDLGFPKGPRIKLLHEVQNLNFTPMA 2587
V +A+Y TMPRQ TR P+DKLRGPVRK A DR L+D+PLL GLSELQTKQA+KVL+TYCANVQRQGSGRIQNKAAYLMSLIQSYKLGP+ G GSAQRL+ERLSP V +AV+GVFDPV+DR V EDRALMELLAKVPEEQALAALKKYRATVQRRGRDAI+NRCGYLIGFLKQYQDG A+VG PG++ +R + + SNG G + N S S S ++GH+ AN RNG NG+GG P+ T +S+ XXX S GVRPI+YLQ PVRK+LEKLFESGKDK VLEDVGLIKQL+RLGEEQALAALKNYKEASKHRRDIHNKSAYLMGILRGYIEGTTPI+KAPWEG GN+DG +A + PP + NRARXXXXXXX P T + + APP RELGGF AP Q+ XX P PL +I+AT S SP PLGG G FL G G S +Y+PS+ LLY+ G G P RH S HE LFG H S ++N Q LVGPGLLGGDFL +GGG++ G XXXXXXXXXXXXXXXXX NFG LGN P SPGS S XXXXXXXXXX SG ESPL SDAGND + T+ S AG +CNGSTD GSP S +G EN+ SSN N +VD+LARLNLSKYV VLAEAEVD+DALRLFGEDDLKDLGFPKGPR+KLLHEVQNLNF A
Sbjct: 21 VKVVASY--TMPRQATR-----PVDKLRGPVRKAA----LAGLDRTSLQDDPLLTGLSELQTKQALKVLDTYCANVQRQGSGRIQNKAAYLMSLIQSYKLGPAPGATAGSAQRLLERLSPPVSQAVQGVFDPVLDRCVYEDRALMELLAKVPEEQALAALKKYRATVQRRGRDAIENRCGYLIGFLKQYQDGVAIVGVPGNAVHQAR--NALESSSNGYGQHLTNGSAGQSSSSATNGHNPNANGARNGAMNGAGGGPSATATSSSQGTGAXXXXXXXXXXNSSGVRPITYLQAPVRKELEKLFESGKDKTVLEDVGLIKQLSRLGEEQALAALKNYKEASKHRRDIHNKSAYLMGILRGYIEGTTPISKAPWEGGGNEDGPGV--NAPTAPPGT----NRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXPATXXXXXXXXXXVAV--SAPP-------------------------RELGGFANAPAQTQXXXXXXXXXXXXXXXXXXXVVRPAAPLTSISATRSASP----PLGGDGRFLASLRHDGASGRPSQGQYEPSNGLLYMNGS--GTHQXXXXXXXXXXXXXPLRHVSPHESLFGGGHLSANHNGGQPQTLVGPGLLGGDFLASGGGANW---------------TGXXXXXXXXXXXXXXXXXXXXXXXXENFGSCSNSRSNLGNAIPQSPGSGSGLXXXXXXXXXXXXVPDSGVESPLSSDAGNDTPGTLPSSTTTTATVSAGSLSVAGSSSCNGSTDWASSGSPESVQGRENTDSSNGNS----VVDVLARLNLSKYVAVLAEAEVDLDALRLFGEDDLKDLGFPKGPRVKLLHEVQNLNFPSRA 831
BLAST of mRNA_F-serratus_M_contig7.18150.1 vs. uniprot
Match: A0A813JZV9_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JZV9_POLGL) HSP 1 Score: 63.2 bits (152), Expect = 3.570e-8 Identity = 27/55 (49.09%), Postives = 38/55 (69.09%), Query Frame = 2
Query: 2405 MVDMLARLNLSKYVPVLAEAEVDMDALRLFGEDDLKDLGFPKGPRIKLLHEVQNL 2569
M ++ ++ L +++P EVD+DAL LF E DL+DLG PKGPR+KLL VQ +
Sbjct: 1 METLMQQIGLERFIPAFQAEEVDLDALSLFEEKDLQDLGLPKGPRVKLLRAVQGI 55
BLAST of mRNA_F-serratus_M_contig7.18150.1 vs. uniprot
Match: A0A813KCP2_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KCP2_POLGL) HSP 1 Score: 60.8 bits (146), Expect = 4.840e-6 Identity = 26/48 (54.17%), Postives = 34/48 (70.83%), Query Frame = 2
Query: 2426 LNLSKYVPVLAEAEVDMDALRLFGEDDLKDLGFPKGPRIKLLHEVQNL 2569
+ L +++P EVD+DAL LF E DL+DLG PKGPR+KLL VQ +
Sbjct: 1 IGLERFIPAFQAEEVDLDALSLFEEKDLQDLGLPKGPRVKLLRAVQGI 48
BLAST of mRNA_F-serratus_M_contig7.18150.1 vs. uniprot
Match: A0A7K4YFZ8_BUCAB (DDHD2 Phospholipase (Fragment) n=3 Tax=Neognathae TaxID=8825 RepID=A0A7K4YFZ8_BUCAB) HSP 1 Score: 60.8 bits (146), Expect = 1.260e-5 Identity = 29/71 (40.85%), Postives = 49/71 (69.01%), Query Frame = 2
Query: 2354 EGTENSHSSNSNGGVGGMVDMLARLNLSKYVPVLAEAEVDMDALRLFGEDDLKDLGFPKGPRIKLLHEVQN 2566
+G E S +++S+GGV + +ML +L LS+Y V + ++D AL L E++LK++G P GPR+K+LH + +
Sbjct: 370 QGQEGSRTTSSSGGVEEVKEMLKKLELSEYCDVFEKEKMDRQALFLCTEENLKEMGIPLGPRMKILHHISS 440
BLAST of mRNA_F-serratus_M_contig7.18150.1 vs. uniprot
Match: A0A8D0HGH4_SPHPU (SAM domain-containing protein n=1 Tax=Sphenodon punctatus TaxID=8508 RepID=A0A8D0HGH4_SPHPU) HSP 1 Score: 54.3 bits (129), Expect = 1.850e-5 Identity = 23/52 (44.23%), Postives = 36/52 (69.23%), Query Frame = 2
Query: 2411 DMLARLNLSKYVPVLAEAEVDMDALRLFGEDDLKDLGFPKGPRIKLLHEVQN 2566
D+L +L LS+Y V + +VD AL L + +LK++G P GPR+K+LH ++N
Sbjct: 29 DILKKLELSEYYSVFEKEQVDRQALALCTDKELKEMGIPLGPRVKILHYIRN 80
BLAST of mRNA_F-serratus_M_contig7.18150.1 vs. uniprot
Match: UPI0018E8C551 (phospholipase DDHD2 isoform X3 n=2 Tax=Dermochelys coriacea TaxID=27794 RepID=UPI0018E8C551) HSP 1 Score: 60.1 bits (144), Expect = 2.110e-5 Identity = 28/58 (48.28%), Postives = 39/58 (67.24%), Query Frame = 2
Query: 2390 GGVGGMVDMLARLNLSKYVPVLAEAEVDMDALRLFGEDDLKDLGFPKGPRIKLLHEVQ 2563
G VGG+ + L +L LS+Y V + +DM AL L E DLKD+G P GPR+K+LH ++
Sbjct: 351 GDVGGVKETLKKLELSEYCSVFEKERLDMQALALCTEKDLKDMGIPLGPRMKILHYIR 408
BLAST of mRNA_F-serratus_M_contig7.18150.1 vs. uniprot
Match: H9G5V9_ANOCA (Uncharacterized protein n=4 Tax=Iguania TaxID=8511 RepID=H9G5V9_ANOCA) HSP 1 Score: 60.1 bits (144), Expect = 2.150e-5 Identity = 31/70 (44.29%), Postives = 41/70 (58.57%), Query Frame = 2
Query: 2405 MVDMLARLNLSKYVPVLAEAEVDMDALRLFGEDDLKDLGFPKGPRIKLLHEVQNLNFTPMA*AQHDCASL 2614
M D+L L LS+Y V + EVD AL L E +LKD+G P GPR+K+LH ++N N Q AS+
Sbjct: 384 MKDILTELELSEYCSVFEKEEVDRQALALCTEKELKDMGIPLGPRMKILHYLRNKNSNKNLKGQKPAASV 453
BLAST of mRNA_F-serratus_M_contig7.18150.1 vs. uniprot
Match: A0A670JC30_PODMU (DDHD domain containing 2 n=7 Tax=Lacertinae TaxID=162266 RepID=A0A670JC30_PODMU) HSP 1 Score: 59.7 bits (143), Expect = 2.850e-5 Identity = 27/58 (46.55%), Postives = 38/58 (65.52%), Query Frame = 2
Query: 2393 GVGGMVDMLARLNLSKYVPVLAEAEVDMDALRLFGEDDLKDLGFPKGPRIKLLHEVQN 2566
G+G + D+L L LS+Y V + VD AL L E +LKD+G P GPR+K+LH ++N
Sbjct: 399 GIGSVTDILTELELSEYCSVFEKENVDRQALALCTEKELKDMGIPLGPRMKILHYLRN 456
BLAST of mRNA_F-serratus_M_contig7.18150.1 vs. uniprot
Match: UPI0018A2217A (phospholipase DDHD2 isoform X5 n=2 Tax=Chelonioidea TaxID=27791 RepID=UPI0018A2217A) HSP 1 Score: 58.9 bits (141), Expect = 4.170e-5 Identity = 28/58 (48.28%), Postives = 39/58 (67.24%), Query Frame = 2
Query: 2390 GGVGGMVDMLARLNLSKYVPVLAEAEVDMDALRLFGEDDLKDLGFPKGPRIKLLHEVQ 2563
G VGG+ ++L +L LS+Y V + +D AL L E DLKD+G P GPR+K+LH V+
Sbjct: 381 GDVGGVKEILKKLELSEYCSVFEKERLDTQALALCTEKDLKDMGIPLGPRMKILHYVR 438
BLAST of mRNA_F-serratus_M_contig7.18150.1 vs. uniprot
Match: UPI000529904D (phospholipase DDHD2 n=1 Tax=Colius striatus TaxID=57412 RepID=UPI000529904D) HSP 1 Score: 58.5 bits (140), Expect = 4.740e-5 Identity = 29/71 (40.85%), Postives = 47/71 (66.20%), Query Frame = 2
Query: 2354 EGTENSHSSNSNGGVGGMVDMLARLNLSKYVPVLAEAEVDMDALRLFGEDDLKDLGFPKGPRIKLLHEVQN 2566
+G E S +++SN G+ + +ML L LS+Y V + ++D AL L E++LK+LG P GPR+K+LH + +
Sbjct: 271 QGEEGSRTASSNRGIEEVTEMLQELELSEYCDVFEKEKMDGQALFLCTEENLKELGIPLGPRMKILHYISS 341 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7.18150.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig7.18150.1 >prot_F-serratus_M_contig7.18150.1 ID=prot_F-serratus_M_contig7.18150.1|Name=mRNA_F-serratus_M_contig7.18150.1|organism=Fucus serratus male|type=polypeptide|length=782bp MPRQVTRSAARGPLDKLRGPVRKMAEEVFSVDTDRAVLKDEPLLNGLSELback to top mRNA from alignment at F-serratus_M_contig7:1243163..1247824- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig7.18150.1 ID=mRNA_F-serratus_M_contig7.18150.1|Name=mRNA_F-serratus_M_contig7.18150.1|organism=Fucus serratus male|type=mRNA|length=4662bp|location=Sequence derived from alignment at F-serratus_M_contig7:1243163..1247824- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig7:1243163..1247824- >mRNA_F-serratus_M_contig7.18150.1 ID=mRNA_F-serratus_M_contig7.18150.1|Name=mRNA_F-serratus_M_contig7.18150.1|organism=Fucus serratus male|type=CDS|length=4692bp|location=Sequence derived from alignment at F-serratus_M_contig7:1243163..1247824- (Fucus serratus male)back to top |