prot_F-serratus_M_contig7.18141.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig7.18141.1
Unique Name	prot_F-serratus_M_contig7.18141.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	395

Homology

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BLAST of mRNA_F-serratus_M_contig7.18141.1 vs. uniprot
Match: D7FLC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLC8_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 1.330e-15
Identity = 55/147 (37.41%), Postives = 88/147 (59.86%), Query Frame = 0

Query:    1 MNEIMEARRSQTLLDSIHELIENQQEVVKTLALTSKKHSPPRVMMPMTGVAFMPATVACGSVLVGLGGDYYVERTPQQAQKILERRISDLRRHADAVAVTDKSIPIVSDKAADVPKKLERTRSKTPATTSWNKGFLSTRSVRPPSRG 147
            M+   +A++SQ L+DSI ELI  + +V        ++  P  VM+P+T VAFM  +VA  S+++GLG DY+VERTP+QA+++L+RR++DL   A  +       P    K+    ++ ++  S T  T  W KGFLS++    P++G
Sbjct:    1 MDVAAKAKKSQALIDSIEELIALEADVSLATQCCQQQREP-EVMVPLTDVAFMHGSVAGESIMMGLGQDYFVERTPEQAREVLQRRMADLSEQARVLREGTLLAPKEPAKSVQGQRRRKKGDSDTKKT--WAKGFLSSKGSGGPTKG 144

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig7.18141.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig7.18141.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FLC8_ECTSI	1.330e-15	37.41	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 253..285
None	No IPR available	PANTHER	PTHR15111	RNA POLYMERASE II SUBUNIT 5-MEDIATING PROTEIN NNX3	coord: 14..280
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 43..66
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 67..394
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..42
None	No IPR available	SUPERFAMILY	46579	Prefoldin	coord: 11..94
IPR004127	Prefoldin alpha-like	PFAM	PF02996	Prefoldin	coord: 11..94 e-value: 1.8E-11 score: 44.0
IPR009053	Prefoldin	GENE3D	1.10.287.370		coord: 2..126 e-value: 8.2E-12 score: 47.0

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig7	contig	F-serratus_M_contig7:1123952..1138724 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig7.18141.1	mRNA_F-serratus_M_contig7.18141.1	Fucus serratus male	mRNA	F-serratus_M_contig7 1123873..1138794 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig7.18141.1 ID=prot_F-serratus_M_contig7.18141.1|Name=mRNA_F-serratus_M_contig7.18141.1|organism=Fucus serratus male|type=polypeptide|length=395bp
MNEIMEARRSQTLLDSIHELIENQQEVVKTLALTSKKHSPPRVMMPMTGV
AFMPATVACGSVLVGLGGDYYVERTPQQAQKILERRISDLRRHADAVAVT
DKSIPIVSDKAADVPKKLERTRSKTPATTSWNKGFLSTRSVRPPSRGSPQ
GASNNPSASGESAGSPSKPCLDGMRSKGSVAQEDTDVSKVEKAGEDPIVD
IREWLDESGEQISVDVTDLGKVLQKPPVLETDGVSALQRQRVQTDGGANI
RGSSHLDSVLDRLEKEEAEAEAEAQEAKAEARKACNPSLEPTSKTAFLDD
VIPGDSAARSRPARSPIADHRSKTRIAAKDSSETSDVTEPVPSRCADAQA
FREGVVEKTTIVGNSNTNPDPKSTYTAEAPSRVSRFKARRKGLQ*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004127	Prefoldin_subunit_alpha
IPR009053	Prefoldin