mRNA_F-serratus_M_contig7.18124.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig7.18124.1
Unique NamemRNA_F-serratus_M_contig7.18124.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig7.18124.1 vs. uniprot
Match: D7FV57_ECTSI (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV57_ECTSI)

HSP 1 Score: 319 bits (818), Expect = 3.590e-106
Identity = 150/222 (67.57%), Postives = 181/222 (81.53%), Query Frame = 1 
Query:  256 SLRKQPREAGADPEKPVELHERVDAGLLAAVEEYDPVPPEAASYGHVFFWDKRYASDEEVIEWYYPWRDLAPTLTRYMDKRDEVLVCGCGNSEMSIDMFHDGFERIMSVDASRVVIHQMCQTYKAYPVEWKPLDLTREAFVEERFDVALDKACLDSIICNPNGESMAESYLQQMDRVLQPEGAFLCISLAPPEERLELLEYWDLDILEKCLAWDVYVDAIAK 921
            +L K+  +  A+ E+  EL+ERVDA LL  V+EYD VP EAASYG   FWD+RYA D EV+EWY+PW +LAPTLT+YMD++DEVLVCGCGNSEMS+DM+ DGFE I++ D S+V IHQ+ + YKAYP+EWK +DLTRE F EE+FDVALDKACLDSI CN  G   AE+YLQQMDR+LQPEGAF+C+S APPEERLELLEYWD+D   KCLAWDV+VD I +
Sbjct:    3 NLFKKQSDEVAEIEELGELNERVDAKLLEEVQEYDAVPSEAASYGKTTFWDERYAGDGEVVEWYHPWGNLAPTLTQYMDEQDEVLVCGCGNSEMSVDMYDDGFENIVNADISKVAIHQVTEIYKAYPMEWKSIDLTREEFPEEKFDVALDKACLDSIACNLRGVVNAENYLQQMDRLLQPEGAFICVSFAPPEERLELLEYWDIDQPAKCLAWDVHVDTIGE 224
[Close]
BLAST of mRNA_F-serratus_M_contig7.18124.1 vs. uniprot
Match: A0A7S1UEF3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UEF3_9STRA)

HSP 1 Score: 201 bits (511), Expect = 4.040e-59
Identity = 107/249 (42.97%), Postives = 151/249 (60.64%), Query Frame = 1 
Query:  268 QPREAGADPEKPVELHERVDAGLLA----AVEEYDPVPPEAASYGHVFFWDKRYASDEEVIEWYYPWRDLAPTLTRYMDKRDEVLVCGCGNSEMSIDMFHDGFERIMSVDASRVVIHQMCQTYKAYPVEWKPLDLTREAFVEERFDVALDKACLDSIICNPNGESMAESYLQQMDRVLQPEGAFLCISLAPPEERLELLEYWDLDILEK-CLAWDVYVDAIAKPAELKKGRKRQPEDGDLYFIYVCIKD 999
            Q  +AGAD         ++ A  LA    A + Y  VP +A +YG   FWD RYA  E   EWY+P+  LA  + ++++  D +L+ GCGNS +  DM++DG+ERI+ VD SRVVI Q  + Y   P++W  +++    F  E+FD  +DKACLD+I C+  GE+ A++ LQ++DR+L+PEG +  +S   PEERLE+LE  D  + EK  LAW V V AIAKPA   K      +   +Y+IYVC KD
Sbjct:    6 QITDAGADLATAFANAAKISASQLALPEGAEKRYQSVPTDACNYGKANFWDDRYARSENAFEWYHPYPALAVLIGQFVNYDDTILIMGCGNSTLPEDMYNDGYERIVCVDLSRVVIDQQQEKYADLPIQWVQMNMCDSLFENEQFDAVIDKACLDAIYCHELGEASAKAALQEVDRILKPEGVYFMVSRGLPEERLEVLEVED--VKEKGYLAWQVQVHAIAKPAVDVKYIPNLADPTSVYYIYVCEKD 252
[Close]
BLAST of mRNA_F-serratus_M_contig7.18124.1 vs. uniprot
Match: A0A6V1PD48_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PD48_HETAK)

HSP 1 Score: 182 bits (462), Expect = 3.160e-52
Identity = 92/221 (41.63%), Postives = 131/221 (59.28%), Query Frame = 1 
Query:  352 EYDPVPPEAASYGHVFFWDKRYASDEEVIEWYYPWRDLAPTLTRYMDKRDEVLVCGCGNSEMSIDMFHDGFERIMSVDASRVVIHQMCQTYK--AYPVEWKPLDLTREAFVEERFDVALDKACLDSIICNPNGESMAESYLQQMDRVLQPEGAFLCISLAPPEERLELLEYWDLDILEKCLAWDVYVDAIAKPAELKKGRKRQPEDGDLYFIYVCIKDPSK 1008
            EY+  P +AA Y    FWD RY  + EV EWY+P+         +MDK DE+L  GCGNSEMS +M  +G++ + ++D S+VVI QM + Y      + W  +D  +  F +  FD+ LDK C+DS++C   G       LQ++DRVL+P+GA++ IS   P+ RL+LLE  D+D     L WDV+V+AIAKP           + G +Y+IYVCIK+  K
Sbjct:   13 EYESHPTDAAQYAKAAFWDSRYMRNPEVFEWYHPYDAFVDIFEMFMDKGDEILNIGCGNSEMSAEMALEGYDWVTNIDHSKVVIEQMKEKYADDLPDMPWYYMDAAKLRFPDNTFDIVLDKGCMDSMLCGNKGRYETGKMLQEIDRVLKPDGAYILISYGTPDLRLDLLEDADIDS-PGFLTWDVFVNAIAKPTTDNFTTPDYGDLGSMYYIYVCIKEERK 232
[Close]
BLAST of mRNA_F-serratus_M_contig7.18124.1 vs. uniprot
Match: A0A7S2V469_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V469_9STRA)

HSP 1 Score: 161 bits (408), Expect = 1.140e-44
Identity = 83/195 (42.56%), Postives = 118/195 (60.51%), Query Frame = 1 
Query:  430 EVIEWYYPWRDLAPTLTRYMDKRDEVLVCGCGNSEMSIDMFHDGFERIMSVDASRVVIHQMCQTYKA-YP-VEWKPLDLTREAFVEERFDVALDKACLDSIICNPNGESMAESYLQQMDRVLQPEGAFLCISLAPPEERLELLEYWDLDILEKCLAWDVYVDAIAKPAELKKGRKRQPEDGDLYFIYVCIKDPSK 1008
            +V EWYYP+   A     YMD  D++LV GCGNSEMS +M  +G+  I++VD S+VVI QM + YK  YP + W  +D  +  F +  FDV +DK  LDS++C   G   A+  LQ +D+VL+P+G ++ +S   P+ RL+LLE  D+   E  L WD +V AIAKPA          +   +Y++YVCIK+  K
Sbjct:    1 DVFEWYYPYDAFADIFAMYMDVNDDILVLGCGNSEMSAEMQEEGYNHIINVDFSKVVIDQMQEKYKEDYPDMTWYVMDAMKLKFEKHTFDVVIDKGLLDSMLCTDKGIINAKMMLQNVDKVLKPDGVYIVVSYGTPDARLDLLEN-DVYESEDFLTWDAFVHAIAKPAANPFSFPDYSDYQSMYYVYVCIKEEKK 194
[Close]
BLAST of mRNA_F-serratus_M_contig7.18124.1 vs. uniprot
Match: F0YBR1_AURAN (Methyltransf_11 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YBR1_AURAN)

HSP 1 Score: 157 bits (397), Expect = 1.010e-42
Identity = 86/221 (38.91%), Postives = 127/221 (57.47%), Query Frame = 1 
Query:  385 YGHVFFWDKRYASDEEVIEWYYPWRDLAPTLTRYMDKRDEVLVCGCGNSEMSIDMFHDGFERIMSVDASRVVIHQMCQTY--KAYP----------VEWKPLDLT--REAFVEERFDVALDKACLDSIICNPNGESMAESYLQQMDRVLQPEGAFLCISLAPPEERLELLEYWDLDILEKCLAWDVYVDAIAK--PAELKKGRKRQPEDGDLYFIYVCIKD 999
            +G   FWD+RY  + E  EWY+ +  L P L ++M K   +L+ GCG+SEM+ DM+ DG+  + +VD SRVV+ +M   Y  K  P          ++WK  D T     F ++ FDV +DKA LD++ C+         YLQ+MDR+L PEG F C+S   PE RL+ +E  D +  +  LAW+V V AI K  P + K  + ++PED  +Y++Y C K+
Sbjct:    2 FGSPGFWDERYYVNCEPFEWYHDYAALKPLLEQFMTKEMHILLVGCGSSEMARDMYEDGYTSLFNVDISRVVVDEMAMRYDMKEIPKMYFEDDLGGIQWKQADATDLTAMFNDKIFDVVVDKALLDALYCSEVPGKQTHKYLQEMDRILTPEGLFFCVSFGLPENRLDKIEDTDEES-DGFLAWEVEVHAIPKLMPNQYKVSQLKKPED--VYYVYTCRKE 219
[Close]
BLAST of mRNA_F-serratus_M_contig7.18124.1 vs. uniprot
Match: A0A484DWQ5_BRELC (Methyltransf_11 domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DWQ5_BRELC)

HSP 1 Score: 140 bits (353), Expect = 1.010e-36
Identity = 72/212 (33.96%), Postives = 113/212 (53.30%), Query Frame = 1 
Query:  379 ASYGHVFFWDKRYASDEEVIEWYYPWRDLAPTLTRYMDKRDEVLVCGCGNSEMSIDMFHDGFERIMSVDASRVVIHQMCQTY--KAYPVEWKPLDLTREAFVEERFDVALDKACLDSIICNPNGESMAESYLQQMDRVLQPEGAFLCISLAPPEERLELLEYWDLDILEKCLAWDVYVDAIAKPAELKKGRKRQPEDGD---LYFIYVCIKD 999
            A YG   +WD+RY  D E  +WY  +      L +Y+ K D +L+ G GNS++S  M +DG+E++M+VD S VV+ QM   Y  +A  ++W+ +++    F +E +D  +DK  +DSI+C     +      Q++ RVL+P G +  +S   PE RL  LE  +L        W V V  + KP         Q  +GD   +++IYVC K+
Sbjct:    2 AQYGKATYWDERYTKDSEQFDWYQRYEGFKVLLNQYVKKTDNILMAGAGNSQLSEAMVNDGYEKLMNVDVSEVVVKQMATKYEDRAEQLQWQTMNMCSLDFADETYDAVVDKGTMDSILCGEGSTTNVAKMCQEIHRVLKPNGLYFIVSYGAPENRLSYLENQELH-------WKVEVHTVPKPIVSAV----QVPEGDAKAVHYIYVCQKE 202
[Close]
BLAST of mRNA_F-serratus_M_contig7.18124.1 vs. uniprot
Match: A0A067CRN2_SAPPC (Methyltransf_11 domain-containing protein n=10 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CRN2_SAPPC)

HSP 1 Score: 139 bits (350), Expect = 2.900e-36
Identity = 69/207 (33.33%), Postives = 111/207 (53.62%), Query Frame = 1 
Query:  379 ASYGHVFFWDKRYASDEEVIEWYYPWRDLAPTLTRYMDKRDEVLVCGCGNSEMSIDMFHDGFERIMSVDASRVVIHQMCQTYKAYP-VEWKPLDLTREAFVEERFDVALDKACLDSIICNPNGESMAESYLQQMDRVLQPEGAFLCISLAPPEERLELLEYWDLDILEKCLAWDVYVDAIAKPAELKKGRKRQPEDGDLYFIYVCIK 996
            A YG   +WD+RY  D E  +WY  +  L   + +Y+ K D VL+ G GNS ++ +M +DGF+ IM++D S+VV+ QM + Y+ +  ++W+ +++   +F +E FD   DK  +DSI+C     +      Q++ RVL+P G F  +S   P+ RL  LE  +L        W V V  + KP           +   +++IYVC K
Sbjct:    2 AQYGKASYWDERYTKDAEQFDWYQRYAGLKDLVLQYLKKTDNVLMSGAGNSRLTEEMMNDGFQTIMNIDVSQVVVDQMAKKYEGHEGMQWQQMNVCSLSFSDETFDSVFDKGTMDSILCGEGSTANVAKMCQEVYRVLKPNGVFFIVSYGVPDNRLSYLENNELH-------WKVTVHTVPKPTVSAVQVTDAADANAVHYIYVCQK 201
[Close]
BLAST of mRNA_F-serratus_M_contig7.18124.1 vs. uniprot
Match: A0A7N1A3C1_KALFE (Methyltransf_11 domain-containing protein n=2 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N1A3C1_KALFE)

HSP 1 Score: 137 bits (346), Expect = 2.850e-35
Identity = 84/229 (36.68%), Postives = 117/229 (51.09%), Query Frame = 1 
Query:  361 PVPPEAASYGHVFFWDKRYASDEEVIEWYYPWRDLAPTLTRYMDKRDEVLVCGCGNSEMSIDMFHDGFERIMSVDASRVVIHQMCQTYKAYP-VEWKPLDLT-REAFVEERFDVALDKACLDSIICNPNGESMAESYLQQMDRVLQPEGAFLCISLAPPEERLELLE---YWD--LDILEKCLAWDVYVDA---IAKPAELKKGRKRQPEDG----DLYFIYVCIKDPS 1005
            P      +YG   +WDKRYAS+    +WY  +  LAP L  Y+  R  VLV GCGNS  S  M  DG+E +++VD S VVI  M + Y   P +++  +D+    AF    FD   DK  LDSI+C  +    A   L +++RVL+  G +L I+   P  RL LL+    W   L ++EK L  D        + KP  L +G   +   G    D+++IYVC KD S
Sbjct:    3 PASTSTTAYGEPEYWDKRYASESGPFDWYQKYSALAPLLRLYIPTRSRVLVVGCGNSAFSEGMVKDGYEEVVNVDVSSVVIEAMQRKYIDLPQLKYMQMDVRDMSAFQSGSFDAVCDKGTLDSILCGTDSRENAAKMLHEVERVLKDNGVYLLITYGSPAYRLRLLKDLCAWTIKLHVIEKTLTEDSPKSLSWELTKPVPLDEGGSLEATTGIKNPDVHYIYVCTKDGS 231
[Close]
BLAST of mRNA_F-serratus_M_contig7.18124.1 vs. uniprot
Match: A0A5D6XKB6_9STRA (Methyltransf_11 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XKB6_9STRA)

HSP 1 Score: 136 bits (343), Expect = 3.040e-35
Identity = 69/208 (33.17%), Postives = 111/208 (53.37%), Query Frame = 1 
Query:  379 ASYGHVFFWDKRYASDEEVIEWYYPWRDLAPTLTRYMDKRDEVLVCGCGNSEMSIDMFHDGFERIMSVDASRVVIHQMCQTY--KAYPVEWKPLDLTREAFVEERFDVALDKACLDSIICNPNGESMAESYLQQMDRVLQPEGAFLCISLAPPEERLELLEYWDLDILEKCLAWDVYVDAIAKPAELKKGRKRQPEDGDLYFIYVCIK 996
            A YG   +WD+RY  D E  +WY  +  L   LT+Y+ K D VL+ G GNS +S +M +DG+++IM++D S +V+ QM   Y  +   ++W+ ++     F +E +D  +DK  +DSI+C            Q++ RVL+P G +  +S   P+ RL  LE        K L W V V  + KP  +   +  + +   +++IYVC K
Sbjct:    2 AQYGKASYWDERYTKDSEQFDWYQRYGGLKELLTQYVKKADAVLMVGAGNSRLSEEMANDGYQKIMNIDISEIVVAQMKAKYEDRVEALQWQRMNACSLEFADESYDSVVDKGTMDSILCGEGSTGNVAKMCQEVHRVLKPNGVYFIVSYGVPDNRLSYLE-------TKELQWKVTVHTVPKPT-VSAVQVSEADANAVHYIYVCQK 201
[Close]
BLAST of mRNA_F-serratus_M_contig7.18124.1 vs. uniprot
Match: A0A812WG36_SYMMI (Eef1akmt4 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WG36_SYMMI)

HSP 1 Score: 136 bits (342), Expect = 3.320e-35
Identity = 69/174 (39.66%), Postives = 103/174 (59.20%), Query Frame = 1 
Query:  352 EYDPVPPEAASYGHVFFWDKRYASDEEVIEWYYPWRDLAPTLTRYMDKRDEVLVCGCGNSEMSIDMFHDGFERIMSVDASRVVIHQMCQTYKAYP-VEWKPLDLTREAFVEERFDVALDKACLDSIICNPNGESMAESYLQQMDRVLQPEGAFLCISLAPPEERLELLEYWDLD 870
            E+D    + A YG + FWD+ Y S+ E  EWYYP++  A  +  ++ K  ++LV GCGNS M  DM  D F  I  VD SRVVI  M      YP +     ++      +E FD  +DK  +DSI+C+  GE   ++ +++++R+L P+G F+CIS A PE+RL+ LE +D+D
Sbjct:    9 EFDKQYSDQAQYGRIHFWDEWYTSEPEPFEWYYPYKKFASVINDHVAKEAKILVAGCGNSYMMEDMVADEFVDITGVDISRVVIDLMKVRCADYPEIRLLTGNMQDTNLPKESFDCIIDKGLMDSILCDLKGEEGVQNLVREVERLLTPDGIFICISHAGPEDRLQYLEVYDID 182
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7.18124.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV57_ECTSI3.590e-10667.57Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A7S1UEF3_9STRA4.040e-5942.97Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6V1PD48_HETAK3.160e-5241.63Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2V469_9STRA1.140e-4442.56Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0YBR1_AURAN1.010e-4238.91Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A484DWQ5_BRELC1.010e-3633.96Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A067CRN2_SAPPC2.900e-3633.33Methyltransf_11 domain-containing protein n=10 Tax... [more]
A0A7N1A3C1_KALFE2.850e-3536.68Methyltransf_11 domain-containing protein n=2 Tax=... [more]
A0A5D6XKB6_9STRA3.040e-3533.17Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A812WG36_SYMMI3.320e-3539.66Eef1akmt4 protein (Fragment) n=1 Tax=Symbiodinium ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig7contigF-serratus_M_contig7:350902..356076 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score322.0
Seed ortholog evalue3.2e-85
Seed eggNOG ortholog2880.D7FV57
Hectar predicted targeting categoryother localisation
EggNOG free text desc.methyltransferase activity
EggNOG OGsKOG2352@1,KOG2352@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons8
Model size1008
Cds size990
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932137.7858407-UTR-F-serratus_M_contig7:350901..3509191622932137.7858407-UTR-F-serratus_M_contig7:350901..350919Fucus serratus maleUTRF-serratus_M_contig7 350902..350919 +
1690964166.0849404-UTR-F-serratus_M_contig7:350901..3509191690964166.0849404-UTR-F-serratus_M_contig7:350901..350919Fucus serratus maleUTRF-serratus_M_contig7 350902..350919 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932137.874615-CDS-F-serratus_M_contig7:350919..3510401622932137.874615-CDS-F-serratus_M_contig7:350919..351040Fucus serratus maleCDSF-serratus_M_contig7 350920..351040 +
1690964166.0973465-CDS-F-serratus_M_contig7:350919..3510401690964166.0973465-CDS-F-serratus_M_contig7:350919..351040Fucus serratus maleCDSF-serratus_M_contig7 350920..351040 +
1622932138.0702426-CDS-F-serratus_M_contig7:351073..3512541622932138.0702426-CDS-F-serratus_M_contig7:351073..351254Fucus serratus maleCDSF-serratus_M_contig7 351074..351254 +
1690964166.1075222-CDS-F-serratus_M_contig7:351073..3512541690964166.1075222-CDS-F-serratus_M_contig7:351073..351254Fucus serratus maleCDSF-serratus_M_contig7 351074..351254 +
1622932138.087165-CDS-F-serratus_M_contig7:351895..3520071622932138.087165-CDS-F-serratus_M_contig7:351895..352007Fucus serratus maleCDSF-serratus_M_contig7 351896..352007 +
1690964166.1204574-CDS-F-serratus_M_contig7:351895..3520071690964166.1204574-CDS-F-serratus_M_contig7:351895..352007Fucus serratus maleCDSF-serratus_M_contig7 351896..352007 +
1622932138.1013753-CDS-F-serratus_M_contig7:352499..3526261622932138.1013753-CDS-F-serratus_M_contig7:352499..352626Fucus serratus maleCDSF-serratus_M_contig7 352500..352626 +
1690964166.1322074-CDS-F-serratus_M_contig7:352499..3526261690964166.1322074-CDS-F-serratus_M_contig7:352499..352626Fucus serratus maleCDSF-serratus_M_contig7 352500..352626 +
1622932138.1157844-CDS-F-serratus_M_contig7:353491..3535751622932138.1157844-CDS-F-serratus_M_contig7:353491..353575Fucus serratus maleCDSF-serratus_M_contig7 353492..353575 +
1690964166.147812-CDS-F-serratus_M_contig7:353491..3535751690964166.147812-CDS-F-serratus_M_contig7:353491..353575Fucus serratus maleCDSF-serratus_M_contig7 353492..353575 +
1622932138.130414-CDS-F-serratus_M_contig7:354041..3541801622932138.130414-CDS-F-serratus_M_contig7:354041..354180Fucus serratus maleCDSF-serratus_M_contig7 354042..354180 +
1690964166.1602445-CDS-F-serratus_M_contig7:354041..3541801690964166.1602445-CDS-F-serratus_M_contig7:354041..354180Fucus serratus maleCDSF-serratus_M_contig7 354042..354180 +
1622932138.1467505-CDS-F-serratus_M_contig7:354966..3551001622932138.1467505-CDS-F-serratus_M_contig7:354966..355100Fucus serratus maleCDSF-serratus_M_contig7 354967..355100 +
1690964166.1777103-CDS-F-serratus_M_contig7:354966..3551001690964166.1777103-CDS-F-serratus_M_contig7:354966..355100Fucus serratus maleCDSF-serratus_M_contig7 354967..355100 +
1622932138.1639662-CDS-F-serratus_M_contig7:355984..3560761622932138.1639662-CDS-F-serratus_M_contig7:355984..356076Fucus serratus maleCDSF-serratus_M_contig7 355985..356076 +
1690964166.1871724-CDS-F-serratus_M_contig7:355984..3560761690964166.1871724-CDS-F-serratus_M_contig7:355984..356076Fucus serratus maleCDSF-serratus_M_contig7 355985..356076 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig7.18124.1prot_F-serratus_M_contig7.18124.1Fucus serratus malepolypeptideF-serratus_M_contig7 350920..356076 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig7.18124.1

>prot_F-serratus_M_contig7.18124.1 ID=prot_F-serratus_M_contig7.18124.1|Name=mRNA_F-serratus_M_contig7.18124.1|organism=Fucus serratus male|type=polypeptide|length=330bp
MDESSGRSDDSSSSGSLGAESSDARETSQDVVAAHDTGSYPTNRSKSRDE
SYTSTTSSNSGNESGADVASSNFFKTWIGSLRKQPREAGADPEKPVELHE
RVDAGLLAAVEEYDPVPPEAASYGHVFFWDKRYASDEEVIEWYYPWRDLA
PTLTRYMDKRDEVLVCGCGNSEMSIDMFHDGFERIMSVDASRVVIHQMCQ
TYKAYPVEWKPLDLTREAFVEERFDVALDKACLDSIICNPNGESMAESYL
QQMDRVLQPEGAFLCISLAPPEERLELLEYWDLDILEKCLAWDVYVDAIA
KPAELKKGRKRQPEDGDLYFIYVCIKDPSK
back to top

mRNA from alignment at F-serratus_M_contig7:350902..356076+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig7.18124.1 ID=mRNA_F-serratus_M_contig7.18124.1|Name=mRNA_F-serratus_M_contig7.18124.1|organism=Fucus serratus male|type=mRNA|length=5175bp|location=Sequence derived from alignment at F-serratus_M_contig7:350902..356076+ (Fucus serratus male)
AGTAGCAGCATTACCTCCATGGATGAGTCGAGTGGACGAAGCGATGATAG
CAGTAGTAGTGGATCGCTAGGCGCTGAATCCTCGGATGCGCGAGAGACCT
CACAGGACGTCGTCGCAGCCCACGATACGGGCTCATATCGTGCCGCGTTA
TTATCCTCGAAGCACCCGGGAGCTACCAATAGAAGTAAGAGTAGGGATGA
ATCGTACACGTCGACGACATCGTCGAACAGCGGCAATGAAAGTGGTGCTG
ACGTGGCAAGCTCCAACTTCTTCAAGACATGGATTGGTTCTTTGCGAAAG
CAGCCCAGGGAGGCGGGTGCCGACCCTGAAAAGCCTGTGGAGCTGCATGA
GAGGTGAATATTAGACAAATTGAACTCAGTATACTGCATATTTTTCCTCG
TGCGAAACAATGCTGCGTGTCTGTCGCGATTTACCAGCCACGTTCATCCG
ATCGGTACCCCGTCGTAGAACCAGTAATTCAACACGCTAATTAGCTTTGC
ACAATGGAGCTCGGGAGCTAATTAGCTTTACAGTCATCATTTGTATCAAA
CTATCAATCGTCGCCCGAGTGGTCTAGTAGGTAACCTGCACACCTGCTAG
TGCGGAAGTCGTGAGTTCGATTCTTACCTAAGTAGGATTTGTGTTGTTTC
TTTCGTAACGGAAAGCGTGGGAACGTGAGTAAGTAAAATTCAACCATTAG
TTGACGAGTTGTGCATCGCGCCAAAAGTTGTAAGGCGTAAACCGGGGAGA
GATGGGAAGATCCTTTGTGACCACAGGCAGGATGGTAATTATGATGTCCA
TTGGCTACAAGTGTGATTTAAAAAAAAAAAGTGCATCGCAGGGTTCGCCG
AGAAGCTTATATTATTAATAGATAAGAGTCAGACAGAAGCCAAATCTGAC
CCGCCAAGGATAACCTCTTATCGTAGATAAGACAACTTTTTCCAGTATGT
TGTGTTTTTATGTTTTTCGCGTCGATCGTTCGTTAACTGGAAAGGGTGGA
TGCCGGACTGTTGGCAGCAGTAGAGGAGTACGACCCGGTACCGCCAGAAG
CAGCATCGTATGGCCATGTTTTTTTTTGGGACAAACGTTACGCGAGCGAC
GAAGAGGTCAGATCAGGCTCCGTCGTAGGCAGAACCTCCCCCAGATCATT
TCGCGCAAAATTCGGAAATAGATCATGGCGCAGTACTCTCACTTGAACCA
CGATCCTACAGGGTACTCGTGTACAATTGACACTGTACATTTCACACGTA
GATAAGCTAGATATGGGTACACTACTGCTGCTGTATATCGTCTCTCGACG
ACTGCAAACGAAATATTGTAAGTCGCCTGCGACCGCACGGCATACGCATC
AGGAGGGTAATTGGATATCGTAGACACTTGAGTCCAATCGGTGGCCAGCG
TGAAAATGTATCGTGACCAATCAGCATCACCTATACACACCGTCGACCTC
ATTAGCTCATGGACTTCCTCTCTTGGTGATATTCGTGAAGTCATTGCTGA
TCATGGGAATGTATACGGTATGGTATGGTCGATTAAATGCATCAAACGAA
AGTGAACGCGAACCTCGGGACTTGCTTTATTTTTACAATAAAAACAAGGT
TATCGAGTGGTATTACCCATGGCGCGACCTTGCCCCTACCCTGACTCGTT
ACATGGATAAGCGAGACGAGGTGCTCGTGTGTGGGTGTGGAAACTCGGAG
ATGAGCATCGACATGTTCCACGATGGTGAGAGGTGAAGATCAGAAACGCT
TTTAATCGTACATAGCTCTATTGCGCAATCACAATCACGGCAACGGAGAC
TGAACGACTAGGAGTTTGAGTTGAACGTCCCAAAAATATGTGGTTTTGCG
AACGATCGTGAAAGCATCTCTGTAGTGCTGCGGCTCAATACATGCTGCTC
GTTACATTCCACAGCGAATAGAAATACAATGCATTACTTACCTAAATTTT
GCAGAGTGTCACGAAGAGTAACAAAATGAGTCGTAAAGGGCTTTCGGATT
TGAGACACGCCGCTTTCACACAACCGAACTCGAGTTCGTAGAAGGGATAT
ACCCCATATTTACCCCACCTTGAAGTATTGGTGTTGATGTTGATTTACGC
TTAATAATGCCCTTTCCAATGAGCGCTAGCGTGTTTCACATGTTCGTAAA
AAAATAATGGAAGCGATTTTTTGCTCGTGAAGTTTGCATTGCTGCAGAGG
TAGAACTAACTCGTATTTCTCGTTGGCATCCGTAAGCATAAAATGTTTAG
GCGCAGGGTTAGGTGTGTGCAGACGCGTCGGGTTGAAATTGCATGTATCT
TATTGAAGTACTTGGATATACACGTAATTTATACTAGTACGCTGTACGGG
CAGCCTGCAGGCCGCCATCGCTCCTTTACTCAAACTAATGTTTCTTGTCA
TTTGCCCCATTTGTCATTGCAATAGATCTTGGTGTATTGTGCGATTGGCT
GTAGTAGTATGTAGCACGCATGAGATCACTGAACACGCAGACAAGCACTC
TTGAGCACCTATTTGCTTCGCCTTTTTCGGGTTTTTGCAACAACAAAAAA
GCCGAGTAAAACCATCGTTCTGCATCTTTTTTTTTCTCAGGGTTCGAACG
TATCATGAGCGTTGACGCATCCCGAGTGGTGATTCATCAGATGTGTCAGA
CTTACAAGGCGTACCCTGTCGAATGTGAGAAAAGTGCAATGACAAAGAAT
ACTATTATTACTGTACCAGGGTAGGTTGAATCGTTTGGCGCGATGGTGAA
TGCCACGAACGATTAGACAGCTCTGGGACCCGTAGTGCCACGATCGCCGC
GGGTTGAAAGCAGAAAAAGCAATTCCGCTCTCAGAAGTGCCTCTGTCAAA
ATGGACGTGATTGTGCGCCTGTGGAGGTACCCCACGGCACACACGGCACA
CATCCCACAGTTGCATCGAAAAGAGCTAATGAGCCCTCCTGTCATCCTGT
CATTGTTTTTTTCAGGCACGTTTAATGGCAACAAGGTACTGTTCAATGGC
AGCAAGGCACTATTTGACGGCAACAAGGCACCATTCAAAGAATTTGTCCG
GTCGGTAATACAGTACAAAGAGAAAAACTGGTCCACTTACCTCCTCGTCT
GATCCGTCTCCTGCCGTTTGCACTACGCGTCGAAATTCAGGGAAACCTTT
AGACCTCACGCGCGAGGCGTTTGTGGAGGAAAGGTTTGATGTTGCCCTTG
ATAAGGCTTGCCTCGACTCCATCATCTGCAATCCCAACGGGGAATCGATG
GCTGAAAGCTATCTCCAGCAGATGGACAGGTGTTTTTTTTTTAAACTGGG
GCCAATCGTTATGTGTATGGAGCTTTGACAAAACGCCAAGACGTGCGCGT
GGAATTTTCTCTTCCATTCAGCTGGAAAACAAACTCGTTTACAACACAAC
TGAATATTGGTAAGAGTATAATGGCACTCTTAATATTCTTCACTGGACCA
ACTTCATCTGAACACCGCAACACCGCAAAGCTGCACGAAACGCTTCTCGA
TCAGGCTAAGAATCCCGTATCCGCCTGCCCCTCCTGCCACTCCAACAAGA
AGGGCGACATCTTACTGCCCCTGTCTCCACACTTTTATGAAGACAGCAAA
ATATTAAAACGCTGTAGTACAGTAATGCCTATCTAATTTGGAGATGGGCG
GTAAGCGTCGCATTCGATTTTTTACTGTCAAGTTCCTGTATATCTGACGC
GGGACGGGGCTGACGAACCCGCCTCGCGAGACCAAATTCTCAGGCACGAA
CGCAGACAAGGAAATATTCATTTTTCCTGTTCAGCTGACCACGTGCAGGA
TTGGCAACCTTACCCGGTTGATCCATACTCTTGCTATAGGTGTGACCGTA
CATACCTCACCCCCTGCCCAAAAAAATAATACCAGTATCATATTATCAAG
AGATAACATCAGATATATCATCAGATATCATCAGATAACATCAGATATAT
CATCAAATATATCATAAAACCATCAATTGCATCAATCAGTTGCATGTCCA
CCTCGATGAAGCCACTAAGCCATCGCGTTCTCTGAGGAACCATTCCCTGT
CGAATTAAAATGCAGGGTACTTCAGCCAGAAGGAGCCTTCCTCTGCATAT
CCCTCGCGCCCCCAGAAGAGCGCCTCGAGCTCTTAGAGTACTGGGATCTA
GACATACTGGAGAAGTGCCTCGCATGGGACGTTTACGTGGATGCGATTGG
TGAGTAGAGAAAAAATAAAACTGGTACAGGGTTGACTCACTTTTCGAAGC
TGAAGCTACATGAAAGTATCTTCGCCTTTCGCCTCTGTACGCTGTAGATA
AAACGGGAAACGCAGGTACGTACTCGCTAGAGAATACCGTGGGGAAAAGG
CATCAAAGTATTATCAACAGTATTCAAACAACAAGGCAAATGGTGGAAAT
AACCCCTCCCTCCATCATCCCGTGGCCATAAAGGCAACACAAACATCGCG
ACCTACCTTCTTGGAGGGATCTCGGCAAGGCATTTCCAGAAACCTTGTTC
TCTTAGCCTGTCCACCTTCGACTTGGGATCGTAACATCGATAAACCCTTC
GCAAACGTTGCGACCTACGTATTACCAGTTTCCCCCGGCGACCACCTTTG
ACCAATCACTTAGTAGTAGTGCACCGTTTCTCGACTCAGCGAGCGCGTGA
ATTGATTAAGCAGACCTCGGACGGTTGCAGGAGGCCAAGGAAAGTCAGGT
CACTAAGAGGGGATCACGTTCACGTGCCCGCCCGAGTACCCTTTTGAAGG
CCAAGGGCTATACGACCCCCGTTACGTATAGGTAGCTGACACCCCGAATC
ATCCCGGACCTTGAACTCCGTTCTTCGAGTACAAGGGAGATGAAAATGTC
GATCTAAGGCCACATTCCGTAGTCGTCCTTCGGGTACTCCGTGGGAAGCC
TCTGGGGCTCGGTCTCCGACAGAGGTTTCGTCACAAGATGGTTTCTAGCG
GTATTATGGAAACTGCAGCCTTTTACTTGCCCCATCTAATGTTCGTGGAC
TGCTGTCGTCAGCCGTTGCCTTAATCGTTAGGCTTTGCTGGATCGACCGT
TCCTTGCCTTCTGTGTCTTATATATCATCACAGCCAAGCCAGCAGAGCTA
AAGAAAGGACGGAAGCGACAACCGGAAGACGGCGATTTATACTTCATTTA
CGTGTGCATCAAAGACCCCAGCAAG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig7:350902..356076+

>mRNA_F-serratus_M_contig7.18124.1 ID=mRNA_F-serratus_M_contig7.18124.1|Name=mRNA_F-serratus_M_contig7.18124.1|organism=Fucus serratus male|type=CDS|length=1980bp|location=Sequence derived from alignment at F-serratus_M_contig7:350902..356076+ (Fucus serratus male)
ATGGATGAGTCGAGTGGACGAAGCGATGATAGCAGTAGTAGTGGATCGCT
AGGCGCTGAATCCTCGGATGCGCGAGAGACCTCACAGGACGTCGTCGCAG
CCCACGATACGGGCTCATATCATGGATGAGTCGAGTGGACGAAGCGATGA
TAGCAGTAGTAGTGGATCGCTAGGCGCTGAATCCTCGGATGCGCGAGAGA
CCTCACAGGACGTCGTCGCAGCCCACGATACGGGCTCATATCCTACCAAT
AGAAGTAAGAGTAGGGATGAATCGTACACGTCGACGACATCGTCGAACAG
CGGCAATGAAAGTGGTGCTGACGTGGCAAGCTCCAACTTCTTCAAGACAT
GGATTGGTTCTTTGCGAAAGCAGCCCAGGGAGGCGGGTGCCGACCCTGAA
AAGCCTGTGGAGCTGCATGAGAGCTACCAATAGAAGTAAGAGTAGGGATG
AATCGTACACGTCGACGACATCGTCGAACAGCGGCAATGAAAGTGGTGCT
GACGTGGCAAGCTCCAACTTCTTCAAGACATGGATTGGTTCTTTGCGAAA
GCAGCCCAGGGAGGCGGGTGCCGACCCTGAAAAGCCTGTGGAGCTGCATG
AGAGGGTGGATGCCGGACTGTTGGCAGCAGTAGAGGAGTACGACCCGGTA
CCGCCAGAAGCAGCATCGTATGGCCATGTTTTTTTTTGGGACAAACGTTA
CGCGAGCGACGAAGAGGGTGGATGCCGGACTGTTGGCAGCAGTAGAGGAG
TACGACCCGGTACCGCCAGAAGCAGCATCGTATGGCCATGTTTTTTTTTG
GGACAAACGTTACGCGAGCGACGAAGAGGTTATCGAGTGGTATTACCCAT
GGCGCGACCTTGCCCCTACCCTGACTCGTTACATGGATAAGCGAGACGAG
GTGCTCGTGTGTGGGTGTGGAAACTCGGAGATGAGCATCGACATGTTCCA
CGATGGTTATCGAGTGGTATTACCCATGGCGCGACCTTGCCCCTACCCTG
ACTCGTTACATGGATAAGCGAGACGAGGTGCTCGTGTGTGGGTGTGGAAA
CTCGGAGATGAGCATCGACATGTTCCACGATGGGTTCGAACGTATCATGA
GCGTTGACGCATCCCGAGTGGTGATTCATCAGATGTGTCAGACTTACAAG
GCGTACCCTGTCGAATGGTTCGAACGTATCATGAGCGTTGACGCATCCCG
AGTGGTGATTCATCAGATGTGTCAGACTTACAAGGCGTACCCTGTCGAAT
GGAAACCTTTAGACCTCACGCGCGAGGCGTTTGTGGAGGAAAGGTTTGAT
GTTGCCCTTGATAAGGCTTGCCTCGACTCCATCATCTGCAATCCCAACGG
GGAATCGATGGCTGAAAGCTATCTCCAGCAGATGGACAGGGAAACCTTTA
GACCTCACGCGCGAGGCGTTTGTGGAGGAAAGGTTTGATGTTGCCCTTGA
TAAGGCTTGCCTCGACTCCATCATCTGCAATCCCAACGGGGAATCGATGG
CTGAAAGCTATCTCCAGCAGATGGACAGGGTACTTCAGCCAGAAGGAGCC
TTCCTCTGCATATCCCTCGCGCCCCCAGAAGAGCGCCTCGAGCTCTTAGA
GTACTGGGATCTAGACATACTGGAGAAGTGCCTCGCATGGGACGTTTACG
TGGATGCGATTGGGTACTTCAGCCAGAAGGAGCCTTCCTCTGCATATCCC
TCGCGCCCCCAGAAGAGCGCCTCGAGCTCTTAGAGTACTGGGATCTAGAC
ATACTGGAGAAGTGCCTCGCATGGGACGTTTACGTGGATGCGATTGCCAA
GCCAGCAGAGCTAAAGAAAGGACGGAAGCGACAACCGGAAGACGGCGATT
TATACTTCATTTACGTGTGCATCAAAGACCCCAGCAAGCCAAGCCAGCAG
AGCTAAAGAAAGGACGGAAGCGACAACCGGAAGACGGCGATTTATACTTC
ATTTACGTGTGCATCAAAGACCCCAGCAAG
back to top