mRNA_F-serratus_M_contig698.18087.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig698.18087.1
Unique NamemRNA_F-serratus_M_contig698.18087.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig698.18087.1 vs. uniprot
Match: A0A6H5KBL4_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBL4_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 5.650e-10
Identity = 72/287 (25.09%), Postives = 123/287 (42.86%), Query Frame = 1 
Query:  862 VRDAFARAEADERSDQPGRQVLGGIPRALCLGLGPSTPHQALQQLQTFEVPEKTSVVDFLSELRISVMNVKIVALVSPDDSTMQVAVKARLA---LVISSRLWPPRSSRVGT--SRQSLSVVLKNG*ILWG---T*R*IELQQRLQLDWAQGGQGAGLHLDLFIAEMCSRLGVKRRSRS*MMHGVGNMTKRNMSTSWQ-------F*KEMAVLANSTSA-CP--GW----KRDARHAISSPQKCLNCGEDAHFARDCLKPFINVSAPINPDVGSSNATETEKIWRTW 1656
            +   FA           G++ L  +  AL   +  S+P + +  LQTF  P  T   ++L+ L+  V NV+ + +V+P D+T+Q+AV+  ++    V+++ ++  +   V    +  +L   L+N   + G   T   +  Q +    W QG +G G            R     RS     +G   MT  +M    +       +    A   NS +  CP   W    +   RH  +   +CLNCG + HF RDC K +IN S  +N ++ + +  E +  W  W
Sbjct:  248 IDKVFADTSKKMEEGSTGKKALAFLTSALGRVVSSSSPEKLVYDLQTFAAPTGTPYSEYLTILQGLVQNVRNLGVVTPQDNTIQLAVRESVSDQYSVLTASVFKGKEKGVVPFDNIDTLMHELRNFEAVKGGATTPTRMMAQVKSSSGWRQGQRGCGGGRTGSGGTNTFRSASPGRSDG--GYGGRVMTVEDMDYEDECAEFKRVYDIHAAPRTNSQATDCPFFAWFTSVEEKDRHRQAFGLRCLNCGSEGHFVRDCDKGYINTSNMLNKNLATESKAEVKARWDRW 532
[Close]
BLAST of mRNA_F-serratus_M_contig698.18087.1 vs. uniprot
Match: A0A6H5K0Q4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Q4_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 6.100e-9
Identity = 65/270 (24.07%), Postives = 114/270 (42.22%), Query Frame = 1 
Query:  913 GRQVLGGIPRALCLGLGPSTPHQALQQLQTFEVPEKTSVVDFLSELRISVMNVKIVALVSPDDSTMQVAVKA----RLALVISS------------------RLWPPRSSRVGTSRQSLSVVLKNG*ILWGT*R*IELQQRLQLDWAQGGQGAGLHLDLFIAEMCSRLGVKRRSRS*MMHGVGNMTKRNMSTSWQF*KEMAVLANSTSACPGWKRDARHAISSPQKCLNCGEDAHFARDCLKPFINVSAPINPDVGSSNATETEKIWRTW 1656
            GR+ L  +  AL   +  S+P + +  LQTF VP  T   ++L+ L+    NV+ +ALV+P D+T+Q+AV+     + +++ +S                  R+   + S  G   Q      + G    G           + D   GG+      D+   + C     KR      ++G+ +  + N   +     +    A  TS     +   RH  +   +CLNCG +  F RDC+K +IN S+ +N ++ + +  E +  W  W
Sbjct:   30 GRKALAFLTSALGRVVNSSSPEKVVYDLQTFAVPTGTPYREYLTTLQGLGHNVRNLALVTPQDNTIQLAVREIVSDQYSVLTASVCKGKELGVVQFDNXPTRRMAQVKGSSGGRQGQRCDGGGRTG---SGGGNTFRSASPGRSDGGYGGRRVMTVEDMDYEDKCEEF--KR------VYGIHSSPRTNSQVN-----DCPFFAWFTSV----EEKDRHRRAFGSRCLNCGSEGQFVRDCVKGYINASSMLNRNLANGSKAEVKARWDRW 279
[Close]
BLAST of mRNA_F-serratus_M_contig698.18087.1 vs. uniprot
Match: A0A6H5KRF6_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRF6_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 6.160e-9
Identity = 69/285 (24.21%), Postives = 126/285 (44.21%), Query Frame = 1 
Query:  883 AEADERSDQ--PGRQVLGGIPRALCLGLGPSTPHQALQQLQTFEVPEKTSVVDFLSELRISVMNVKIVALVSPDDSTMQVAVKARLA---LVISSRLWPPRSSRVGT--SRQSLSVVLKNG*ILWG---T*R*IELQQRLQLDWAQGGQGAG--------LHLDLFIAEMCSRLGVKRRSRS*MMHGVGNMTKRNMSTSWQ--F*KEMAVLANSTSA-CP--GW----KRDARHAISSPQKCLNCGEDAHFARDCLKPFINVSAPINPDVGSSNATETEKIWRTW 1656
            A+  ++ D+   G++ L  +  AL   +  S+P + +  LQT  VP  T   ++L+ L+  V NV+ + +V+P D+T+Q+AV+  ++    V+++ ++  +   V    +  +L   L+N   + G   T      Q +    W QG +G G         +  +      +  G         +  V +M   +    +Q  +    A   NS +  CP   W    +   RH  +   +CLNCG + HF RDC K +IN S  +N ++ + +  E +  W  W
Sbjct:   49 ADTSKKMDEGSTGKKALTFLTSALWRVVSSSSPEKLVYDLQTCAVPTGTPYSEYLTTLQGLVHNVRNLGVVTPQDNTIQLAVRESVSDQYSVLTASMFKGKELCVVAFDNIDTLMHELRNFEAVKGGATTPTRRMAQVKSSSGWRQGQRGGGGGRTGSGGTNTRVMTGXRSASPGRSDGGYGGRVMTVEDMDYEDECAEFQRVYDIHAAPRTNSQATDCPFFAWFTSVEEKDRHRRAFGLRCLNCGSEGHFVRDCDKGYINASNMLNKNLATGSKAEVKARWDRW 333
[Close]
BLAST of mRNA_F-serratus_M_contig698.18087.1 vs. uniprot
Match: A0A6H5KNG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNG1_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 7.490e-9
Identity = 51/154 (33.12%), Postives = 79/154 (51.30%), Query Frame = 3 
Query: 1131 ASIGDQFATLAASIFAGRNQSAIPFGSVEERLDSLGDLTMNRTPATAATRLG------PR-----------RAGGGAASGSVHSGNVFPVGGKEKKSKLDDARRWQHDEKEYEHIMAVLERDGGFGQ------FYVRLPRLEERRAARDKFTPK 1523
            A + DQ+ATL A +F GRN  A+P+ S+E  +++L D+T N T ATA+ RL       PR           R GGG +     SG++ P G    ++ +  A+ +  + +E+  +  V   + GFG+      FYV+    +ER  AR +F PK
Sbjct:  165 AGVTDQYATLTAPVFHGRNTQALPYDSLESLMEALDDMTDNTTTATASVRLRGVGSVLPRGQADMSVSSRGRYGGGGSFSGAKSGSLTPQGSAGARAVMTVAQ-YDDESREFWQVSQVSRGNKGFGRNDDDPPFYVQFTNNKERDRARREFGPK 317
[Close]
BLAST of mRNA_F-serratus_M_contig698.18087.1 vs. uniprot
Match: A0A6H5K1N6_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1N6_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 6.570e-8
Identity = 69/288 (23.96%), Postives = 113/288 (39.24%), Query Frame = 1 
Query:  853 K*MVRDAFARAEADERSDQPGRQVLGGIPRALCLGLGPSTPHQALQQLQTFEVPEKTSVVDFLSELRISVMNVKIVALVSPDDSTMQVAVKARLALVISSRLWPPRSSR--VGTSRQSLSVVLKNG*IL-WGT*R*IELQQR-LQLDWAQGGQGAGLHLDLFIAEMCSRLGVKRRSRS*MMHG--VGNMTKRNMSTSWQF*KEMAVLAN------STSACPGWKR--------DARHAISSPQKCLNCGEDAHFARDCLKPFINVSAPINPDVGSSNATETEKIWRTW 1656
            K  +  +F++      +   GR+ L  + R L   L  +TP   +  LQ  EV   T   ++++ LR  V N   V   S  D+ +Q+AV+  +    S+        R  +     S+  ++    +L W T     +++  + +   + GQG G +         S     R        G  V N+ +       +F K   V           S  P + R        +AR A     KCLNCG+ +HF R+C  PFIN S  +NP++G       ++ W  W
Sbjct:  541 KAKITSSFSQTRQQLDNGMAGREALNFLVRVLTRTLSMATPQHVVFALQNLEVDAGTPFSEYMNTLRALVQNAMSVGHESAQDNVLQLAVRDSVCDQYSNIAVDVFKGRDLMAVPYDSIRDLMDALEVLAWNTTEATAVKRNVISVQTKRAGQGGG-NASAGTTSYASAASAGRMYGKQPSQGARVMNIHEEMEDEEKEFKKVHYVATQWEKGKGDESYIPFYTRFDSRKEQDEARQAYGL--KCLNCGDQSHFVRECTHPFINKSNMLNPELGQGPPQLVKERWSKW 825
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig698.18087.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KBL4_9PHAE5.650e-1025.09CCHC-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5K0Q4_9PHAE6.100e-924.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRF6_9PHAE6.160e-924.21CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KNG1_9PHAE7.490e-933.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1N6_9PHAE6.570e-823.96CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig698contigF-serratus_M_contig698:147746..151824 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons4
Model size1658
Cds size369
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig698.18087.1prot_F-serratus_M_contig698.18087.1Fucus serratus malepolypeptideF-serratus_M_contig698 148195..148563 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932130.0563712-UTR-F-serratus_M_contig698:147745..1479431622932130.0563712-UTR-F-serratus_M_contig698:147745..147943Fucus serratus maleUTRF-serratus_M_contig698 147746..147943 -
1690964162.5416257-UTR-F-serratus_M_contig698:147745..1479431690964162.5416257-UTR-F-serratus_M_contig698:147745..147943Fucus serratus maleUTRF-serratus_M_contig698 147746..147943 -
1622932130.0715287-UTR-F-serratus_M_contig698:147961..1481941622932130.0715287-UTR-F-serratus_M_contig698:147961..148194Fucus serratus maleUTRF-serratus_M_contig698 147962..148194 -
1690964162.5537436-UTR-F-serratus_M_contig698:147961..1481941690964162.5537436-UTR-F-serratus_M_contig698:147961..148194Fucus serratus maleUTRF-serratus_M_contig698 147962..148194 -
1622932130.0980196-UTR-F-serratus_M_contig698:148563..1485811622932130.0980196-UTR-F-serratus_M_contig698:148563..148581Fucus serratus maleUTRF-serratus_M_contig698 148564..148581 -
1690964162.57692-UTR-F-serratus_M_contig698:148563..1485811690964162.57692-UTR-F-serratus_M_contig698:148563..148581Fucus serratus maleUTRF-serratus_M_contig698 148564..148581 -
1622932130.1147602-UTR-F-serratus_M_contig698:149123..1493061622932130.1147602-UTR-F-serratus_M_contig698:149123..149306Fucus serratus maleUTRF-serratus_M_contig698 149124..149306 -
1690964162.5883253-UTR-F-serratus_M_contig698:149123..1493061690964162.5883253-UTR-F-serratus_M_contig698:149123..149306Fucus serratus maleUTRF-serratus_M_contig698 149124..149306 -
1622932130.1294804-UTR-F-serratus_M_contig698:151167..1518241622932130.1294804-UTR-F-serratus_M_contig698:151167..151824Fucus serratus maleUTRF-serratus_M_contig698 151168..151824 -
1690964162.6075943-UTR-F-serratus_M_contig698:151167..1518241690964162.6075943-UTR-F-serratus_M_contig698:151167..151824Fucus serratus maleUTRF-serratus_M_contig698 151168..151824 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932130.0848913-CDS-F-serratus_M_contig698:148194..1485631622932130.0848913-CDS-F-serratus_M_contig698:148194..148563Fucus serratus maleCDSF-serratus_M_contig698 148195..148563 -
1690964162.5650907-CDS-F-serratus_M_contig698:148194..1485631690964162.5650907-CDS-F-serratus_M_contig698:148194..148563Fucus serratus maleCDSF-serratus_M_contig698 148195..148563 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig698.18087.1

>prot_F-serratus_M_contig698.18087.1 ID=prot_F-serratus_M_contig698.18087.1|Name=mRNA_F-serratus_M_contig698.18087.1|organism=Fucus serratus male|type=polypeptide|length=123bp
MVRDAFARAEADERSDQPGRQVLGGIPRALCLGLGPSTPHQALQQLQTFE
VPEKTSVVDFLSELRISVMNVKIVALVSPDDSTMQVAVKARLALVISSRL
WPPRSSRVGTSRQSLSVVLKNG*
back to top

mRNA from alignment at F-serratus_M_contig698:147746..151824-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig698.18087.1 ID=mRNA_F-serratus_M_contig698.18087.1|Name=mRNA_F-serratus_M_contig698.18087.1|organism=Fucus serratus male|type=mRNA|length=4079bp|location=Sequence derived from alignment at F-serratus_M_contig698:147746..151824- (Fucus serratus male)
TTTCATTGTGTCTGTGTCTAGTTCTTCACTAGCCGTCGACATGATATTGT
ATCCGCTTTGTGTCGTATTTTGTCTTTGCTTTGAACTTTACAGGCCTGGG
CAACCGTAAAAGACCGCGACTTTCCTTGCACGCACTGACTGCTGAAGGCG
CCTTGAAACACTTTACGCCCCAAACCCCTCTAGTAAACATTTCTATTTGA
GAGTGGAACACCCTATTGGGGTCTGTGGAGAACTGAGGGATGTTCCATGT
GGTAATCCTGCTTAGAATGATAGCTTTCGAGACTACCCAGGCATGTTCTC
TTACAACAAGTGAACATTTCTTAGACTTCAAGTTAGTGTAGGGAATCTAA
TACTGGAGTTGAGTAGGAGAATCGTGCGTATTAACAGGAGTCGAGACGCG
GATGCGTGCGCGTATCTCTCGTGTGATCAAAGTTTCTGAGTGGACCTCGG
TGCAGTGTTCAGCTTTTGCTGTAGTACTGGTGCTTCTCTCCCGACACGTT
AGTAAGAGTTGGACAAAGAACAAGGATCTCAACCAAAACGATCCTACAAC
CCCGATCAGTAGTGTAAGCTCCTCATCTTCTAACATTTGGCGACTGCGGG
CAGGACTTCGGTTGCAGCGTCCGTCCGCCTAGAAAATGGCGAAAACCACA
CGAGAAGGTGAGAAACCAAGACGGAGCCCTAGAATTGCGTGCTCCCCTAG
TACTGGGTTTAAGGAAGAAGTGCAAAGATCGACGAAGGGAGATACACAAG
TAGACCCCACGGAGAGACCCAACTCCGAATTCTCGATCCCTTCCAAACAA
CCGACGCTCACTCTGGTAGCATCGGCGGCCGCCCTGACTCTGCTATCACG
CCAAAAAATCAAGTTGCTTGCATGAAACCTACATTTTCAGCTCTAATCGA
TAAAATTTCATTTTCATCTAGTCCTGCATGTGAGTACATCGCACCTTCTC
GAGATTCGGCTCTATTTTCCAATGAACCTGCGCTCGCCGAAAATACCGGA
GAAGACTTGAACGCTTCGCCTCCCGTCGGGATCACCGATCGTCAGAAGAC
GGATGCTACATCACCTGCTGCTGCGGGTCCGCCAGGGAATCCTCGCGGAA
GCGACGGTCCGACAGGGAACGCCTGCGAGAGCACAAGCGGAACAAGAGGC
TTTCGGACGGCCAGCATGTACGAAGCGACCCTTGGTACCTGTATGCTCGG
AGAGATACATGGTCCGAGGTCTTAAAGGACAGAAAATGATCTCCGGGGAC
GCCATCGCTCAAGGTTGCCCGAGCCCACCAGGACGCTCGCAGAGGTACTT
GGTGAAGACATTTCAGCCAGTGCCCCCGGAGGGGCACTTGGCCGCTGTAC
TCCAGCGCTAGCCGGGAGTCCTCGAGGAACCGATGGCCCTTCAAGGGAGG
AAGCTCTCGCCAGAGGATCTGCTTTTGAGGAGCCAAGATCCCCCTCGAAA
ATATTTTCCCCCGAGCAAAGGCCAGATCTGAGTTCGTTCCGTCAAGCTTC
TCGCCATGCTGCACTCATCAGGCCTGCGGAGCCTGAGCCGGCCGAGGAGA
ACTTCGCCGGTGGGGAGCCTGGGCCATCGGTGGAAGATCTCCGTGACGGA
CTAGCGGAGCAGGACACGGCACGTGGGCTCGAACAAGAGGTAAATATTGA
CCAGATTCAAGCGTTCATTTCAAGCCTTCCTATGGCAGAAAGGCTCCAAG
TTCTAGGTCTGCCAGAGCTGCACGCCGTAAGGCCTCCCGTTATGACTCGA
GAAGAACAAGCTACGCGAAAAATGCAGGAACGTGAGATTCCTCCTGCTGC
TGCTCAGGACAAGACTGGGGCAGTCAGGTCGGGATTCGCTCCCGCTAGTA
TTCCCCACGCAGACGCGATGGACTTCGCCCAACTCTCCCCCGATGCCCAA
CCAAGGCCTACCCCGACGACTTTCGTGACCCGTTCGTCCCAGCCTGTTTC
AAACGCAATGCACTATGCGCCGTTTCCCGAAAATGACGATCGAAATGCAC
ACCCCAATGTTTCGCACGATGTTTTCACTTGTGGTGATCCCAGTGCGGAA
ATTTCAAATTTCCAGGCTCCAAGACGAGGTCGCCCTCTGCAGGCAGCGGA
TAGCGTCGTACCCGAGCGAGATCCAGGAAATGCGTGCCGCCATGGACCTT
CACGAGATATTTCACTCCGAGCTTGCGGCGGGCTTCGAGGCCGACCAAAA
AAAGGCCAACCTGGACTGGAGACGCGCTCTTGAATGTTTGGACCGACGAC
GAGACGTCAACCTCGCGGAGTACGACCGCCGCAGCAAGGAACTCTGCAGG
AGACGTGGCACCGAGCTATTCCTTGGAGGCGGGATGGGACTTCCCGCACA
GAGCCGGACGTCCCGCCGGAACTCGCCCAGCAGGATTTCGCCCCCCGCTC
CTCGAAAGAGACGAACAAGTTTGAGCCAGCCTTCGGACATCATGGTGAGA
TGGACGAGTTCCGTCGACTAAAGATCATGTACCCTACTGCCTCCACTTGC
GAACTTGCCGAATTCCAGGTTTTTGCTAAGGCGGTGGCGTCGCATCGGGA
AGGCGGACGTGGCAGCGAGGACCGTGTTGACGATAATTGTGAAGCCACCG
ATGACGACCGCTGGCGGGGCAGGCGCAGCTCTCGCAAGGGACTTCAAGGA
CTCCCGCGAGCGCCGCCCCGGTGACCGACCTTCTGCTGCTACGCAACCCA
GGTGGGACGAAAAAAGTGATAGCTCTTCCTCTAGTTCAGATTTCTCTCGC
CGAGACAGCCGACGTCGCAGCCACAGGCGTAGAAGAGTGAAAAGCCAAGA
TCGCCCTGCAGATTTCGTATCCTCATCCCGATCACCCGCGCCGGAACAAC
TGTCTGCCCCCTCACTTCTAAGGCCACAGCATCTAGCGCTCCCTACAGTA
CATCACCCGGCCCCGAGCGAACCCCGCGTCCGAAAAATCTTCCGCGCTCT
TGTCCGAGATTTCCTCCCGTCCCAGCCAGAGAGAAGACGTCAATCGGAAA
TGCTACTCGTCCCTGGACACCAAGGGCCTGATGAAGTTGCCCTCGATCCG
TTTCGACATCGCGGACGGAAATTCCCAGATGAATCTTGTCAATTTCACCA
CTTCTCTCAAAGGGGCTGTCGCGCAGATCAGAGACCTATTAATAGGTGAA
GATTTTAGTGAAGATGGTAGTTGGATTCCAGGATGGCACAAACCGCTGAT
GCGCCATGTTCTCAACTCCGTGTCTCACCATTATCCCGCCCAGGTGACGA
GGGCGAAGTAGATGGTTCGGGACGCCTTTGCCAGAGCCGAAGCTGACGAG
AGGAGCGACCAACCCGGACGACAAGTTCTGGGAGGGATTCCACGCGCTTT
GTGTCTGGGACTTGGCCCTTCTACACCGCACCAAGCGCTACAGCAGCTGC
AGACCTTTGAAGTACCCGAGAAGACTTCGGTCGTGGACTTCCTATCCGAG
TTGCGCATATCGGTCATGAATGTTAAGATTGTAGCTCTTGTCTCTCCCGA
TGATAGCACGATGCAAGTGGCGGTGAAGGCTAGGCTAGCATTGGTGATCA
GTTCGCGACTCTGGCCGCCTCGATCTTCGCGGGTAGGAACCAGTCGGCAA
TCCCTTTCGGTAGTGTTGAAGAACGGCTAGATTCTCTGGGGGACTTGACG
ATGAATCGAACTCCAGCAACGGCTGCAACTAGACTGGGCCCAAGGAGGGC
AGGGGGCGGGGCTGCATCTGGATCTGTTCATAGCGGAAATGTGTTCCCGG
TTGGGGGTAAAGAGAAGAAGTCGAAGCTAGATGATGCACGGCGTTGGCAA
CATGACGAAAAGGAATATGAGCACATCATGGCAGTTCTAGAAAGAGATGG
CGGTTTTGGCCAAAATCATTCCGATCCCGCATTCTACGTCCGCTTGCCCA
GGCTGGAAGAGAGACGCGCGGCACGCGATAAGTTCACCCCAAAAATGCCT
CAATTGCGGTGAGGACGCTCACTTCGCTCGAGATTGCCTCAAACCCTTCA
TAAACGTATCAGCTCCAATCAACCCTGATGTCGGATCTAGCAACGCAACT
GAAACAGAAAAAATATGGCGTACATGGCA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig698:147746..151824-

>mRNA_F-serratus_M_contig698.18087.1 ID=mRNA_F-serratus_M_contig698.18087.1|Name=mRNA_F-serratus_M_contig698.18087.1|organism=Fucus serratus male|type=CDS|length=738bp|location=Sequence derived from alignment at F-serratus_M_contig698:147746..151824- (Fucus serratus male)
ATGGTTCGGGACGCCTTTGCCAGAGCCGAAGCTGACGAGAGGAGCGACCA
ACCCGGACGACAAGTTCTGGGAGGGATTCCACGCGCTTTGTGTCTGGGAC
TTGGCCCTTCTACACCGCACCAAGCGCTACAGCAGCTGCAGACCTTTGAA
GTACCCGAGAAGACTTCGGTCGTGGACTTCCTATCCGAGTTGCGCATATC
GGTCATGAATGTTAAGATTGTAGCTCTTGTCTCTCCCGATGATAGCACGA
TGCAAGTGGCGGTGAAGGCTAGGCTAGCATTGGTGATCAGTTCGCGACTC
TGGCCGCCTCGATCTTCGCGGGTAGGAACCAGTCGGCAATCCCTTTCGGT
AGTGTTGAAGAACGGCTAGATGGTTCGGGACGCCTTTGCCAGAGCCGAAG
CTGACGAGAGGAGCGACCAACCCGGACGACAAGTTCTGGGAGGGATTCCA
CGCGCTTTGTGTCTGGGACTTGGCCCTTCTACACCGCACCAAGCGCTACA
GCAGCTGCAGACCTTTGAAGTACCCGAGAAGACTTCGGTCGTGGACTTCC
TATCCGAGTTGCGCATATCGGTCATGAATGTTAAGATTGTAGCTCTTGTC
TCTCCCGATGATAGCACGATGCAAGTGGCGGTGAAGGCTAGGCTAGCATT
GGTGATCAGTTCGCGACTCTGGCCGCCTCGATCTTCGCGGGTAGGAACCA
GTCGGCAATCCCTTTCGGTAGTGTTGAAGAACGGCTAG
back to top