mRNA_F-serratus_M_contig6967.18073.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig6967.18073.1 vs. uniprot
Match: D8LS86_ECTSI (PARP catalytic domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS86_ECTSI) HSP 1 Score: 246 bits (629), Expect = 2.080e-77 Identity = 117/158 (74.05%), Postives = 131/158 (82.91%), Query Frame = 1
Query: 1 NVVRRFHGTSCSSSCKFYVDLRGGPCGESECNVCSICTHGFRLRKNVGHTARRTGMNLRFGHGMYFSSVSGKANDYAEESEKMDRSGKPIRCMFMASVAVGRAFKTYESALDTSQCPPPGYDSVIGEAGPCATLNYDEVVVYKEGAALPTFLIVYSLN 474
NV RRFHGTSCS+ C F+VDLRGGPCGES C VC+ICTHGF+LR NVG TARRT +LR+G G+YFSSVSGKANDYAE SEK DRSGK +RCMF++SV VGRAF TYE L QCPPPG+DSV+GE GP LNY EVVVYKE AALPT LIVY+L+
Sbjct: 320 NVQRRFHGTSCSNVCTFFVDLRGGPCGESTCKVCNICTHGFQLRDNVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEKTDRSGKKVRCMFLSSVTVGRAFITYEGKLPPEQCPPPGFDSVVGEKGPA--LNYPEVVVYKEEAALPTHLIVYALH 475
BLAST of mRNA_F-serratus_M_contig6967.18073.1 vs. uniprot
Match: D8LS87_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS87_ECTSI) HSP 1 Score: 226 bits (576), Expect = 1.070e-69 Identity = 105/156 (67.31%), Postives = 126/156 (80.77%), Query Frame = 1
Query: 1 NVVRRFHGTSCSSSCKFYVDLRGGPCGESECNVCSICTHGFRLRKNVGHTARRTGMNLRFGHGMYFSSVSGKANDYAEESEKMDRSGKPIRCMFMASVAVGRAFKTYESALDTSQCPPPGYDSVIGEAGPCATLNYDEVVVYKEGAALPTFLIVYS 468
NV RRFHGTSCS+ C F+VDLRG PC + C VCSICTHGF L+ NVG TARRT LR+G G+YFSSVSGKANDYA+ SEK D +G+ +RCMF+A+VA G+AFKT+E++L ++CPP GYDSV+GE G LNYDE+VVYK+ AALPT LIVYS
Sbjct: 300 NVRRRFHGTSCSTKCNFFVDLRGNPCSDKGCKVCSICTHGFTLQGNVGGTARRTNFGLRYGEGLYFSSVSGKANDYADFSEKTDSNGRRLRCMFVANVAAGKAFKTHETSLQQNECPPAGYDSVVGEVG--QGLNYDELVVYKDEAALPTHLIVYS 453
BLAST of mRNA_F-serratus_M_contig6967.18073.1 vs. uniprot
Match: D8LKU8_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU8_ECTSI) HSP 1 Score: 201 bits (511), Expect = 1.280e-62 Identity = 91/157 (57.96%), Postives = 117/157 (74.52%), Query Frame = 1
Query: 1 NVVRRFHGTSCSSSCKFYVDLRGGPCGESECNVCSICTHGFRLRKNVGHTARRTGMNLRFGHGMYFSSVSGKANDYAEESEKMDRSGKPIRCMFMASVAVGRAFKTYESALDTSQCPPPGYDSVIGEAGPCATLNYDEVVVYKEGAALPTFLIVYSL 471
NV RRFHGTSCS+ C F+VDL+G PC CNVC+ICTHGF LR NV TARR R+G G+YFSSVSGK+NDYA++SEK+ GK +RCMF+A+V G A+ T + +L CPP GYDSV+GE G + L +DE+V Y++ AA+P++LIVY+L
Sbjct: 78 NVRRRFHGTSCSAQCNFFVDLKGNPCSSKACNVCNICTHGFVLRDNVRGTARRANYRRRYGEGLYFSSVSGKSNDYAQQSEKVGSDGKKVRCMFVANVTAGNAYLTQQGSLGQDMCPPAGYDSVVGEVG--SGLIHDELVAYEDEAAIPSYLIVYAL 232
BLAST of mRNA_F-serratus_M_contig6967.18073.1 vs. uniprot
Match: A0A6H5JBF5_9PHAE (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBF5_9PHAE) HSP 1 Score: 194 bits (494), Expect = 4.690e-60 Identity = 96/160 (60.00%), Postives = 115/160 (71.88%), Query Frame = 1
Query: 1 NVVRRFHGTSCSSSCKFYVDLRGG--PCGESECNVCSICTHGFRLRKNVGHTARRTGMNLRFGHGMYFSSVSGKANDYAEESEKMDRSGKPIRCMFMASVAVGRAFKTYESALDTSQCPPPGYDSVIGEAGPCATLNYDEVVVYKEGAALPTFLIVYSLN 474
N+ +RFHGTSC+ C F VD +GG PCG+S C+VC+IC GF+L NV TAR TG+ LR+G G+Y +SVSGKANDYA S K +RCMF+ASVAVGRAFKT + L +QCPPPGY SV+GE G LN+DE VVY E AALPT LIVY+L
Sbjct: 74 NLCQRFHGTSCNEGCNFMVDPQGGQAPCGKSSCSVCNICKLGFKLGANVAGTARATGVPLRYGEGIYLTSVSGKANDYASRSAKKIGIASELRCMFVASVAVGRAFKTKSTRLPANQCPPPGYQSVVGEVG--QGLNFDEFVVYNEEAALPTHLIVYALR 231
BLAST of mRNA_F-serratus_M_contig6967.18073.1 vs. uniprot
Match: D7FXR1_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR1_ECTSI) HSP 1 Score: 192 bits (489), Expect = 2.610e-59 Identity = 94/160 (58.75%), Postives = 115/160 (71.88%), Query Frame = 1
Query: 1 NVVRRFHGTSCSSSCKFYVDLRGG--PCGESECNVCSICTHGFRLRKNVGHTARRTGMNLRFGHGMYFSSVSGKANDYAEESEKMDRSGKPIRCMFMASVAVGRAFKTYESALDTSQCPPPGYDSVIGEAGPCATLNYDEVVVYKEGAALPTFLIVYSLN 474
N+ +RFHGTSC+ C F VD +GG PCG+S C+VC+IC GF+L NV TAR TG LR+G G+Y +SVSGKANDYA S K + +RCMF+A+VAVGR FKT ++L +QCPPPGY SV+GE G LN+DE VVY E AALPT LIVY+L
Sbjct: 73 NLCQRFHGTSCNEGCNFMVDPQGGQAPCGKSSCSVCNICKLGFKLGANVAGTARATGFPLRYGEGVYLTSVSGKANDYASRSAKKIGNDSELRCMFVANVAVGRTFKTKSTSLPANQCPPPGYQSVVGEVG--RGLNFDEFVVYDEEAALPTHLIVYALR 230
BLAST of mRNA_F-serratus_M_contig6967.18073.1 vs. uniprot
Match: D8LS88_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS88_ECTSI) HSP 1 Score: 197 bits (501), Expect = 1.480e-58 Identity = 93/158 (58.86%), Postives = 116/158 (73.42%), Query Frame = 1
Query: 1 NVVRRFHGTSCSSSCKFYVDLRGGPCGESECNVCSICTHGFRLRKNVGHTARRTGMNLRFGHGMYFSSVSGKANDYAEESEKMDRSGKPIRCMFMASVAVGRAFKTYESALDTSQCPPPGYDSVIGEAGPCATLNYDEVVVYKEGAALPTFLIVYSLN 474
N+ RRFHGTSCS C F VD + PCG C++C+I GF+L +NVG TA NLR+G G+YFSSVSGKANDYA+ + K + G +RCMF+A+VA G+A+ T E ALD +CPPPGY+SV+GE G LNYDE+VVYKE AALPT LIVY+L+
Sbjct: 294 NIRRRFHGTSCSDGCNFIVDPQRSPCGLRSCSLCNISMRGFKLDENVGRTALARNFNLRYGKGVYFSSVSGKANDYADLTAKTAKDGTKLRCMFVANVAAGKAYSTKEKALDDGKCPPPGYESVVGEVG--QGLNYDELVVYKEEAALPTHLIVYALH 449
BLAST of mRNA_F-serratus_M_contig6967.18073.1 vs. uniprot
Match: D7FXR2_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR2_ECTSI) HSP 1 Score: 187 bits (474), Expect = 9.630e-55 Identity = 96/161 (59.63%), Postives = 115/161 (71.43%), Query Frame = 1
Query: 1 NVVRRFHGTSCSSSCKFYVDLRGG--PCGESECNVCSICTHGFRLRKNVGHTARRTGMNLRFGHGMYFSSVSGKANDYAEESEKMDRSGK-PIRCMFMASVAVGRAFKTYESALDTSQCPPPGYDSVIGEAGPCATLNYDEVVVYKEGAALPTFLIVYSLN 474
N+ +RFHGTSC+ C F VD +GG PCGES C+VC+IC GF+L NV TAR T LR+G G+Y +SVSGKANDYA S K + G+ +RCMF+ASVA+G FKT + L QCPPPGY SV+GEAG LN+DE VVYKE AALPT LIVY+L
Sbjct: 271 NLCQRFHGTSCNEGCNFMVDPQGGQAPCGESSCSVCNICKLGFQLGPNVARTARATRFPLRYGAGIYLTSVSGKANDYASRSAK--KVGELELRCMFVASVALGNTFKTTSARLPADQCPPPGYHSVVGEAG--QRLNFDEFVVYKEEAALPTHLIVYALR 427
BLAST of mRNA_F-serratus_M_contig6967.18073.1 vs. uniprot
Match: D8LKU9_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU9_ECTSI) HSP 1 Score: 187 bits (475), Expect = 6.620e-54 Identity = 94/160 (58.75%), Postives = 111/160 (69.38%), Query Frame = 1
Query: 1 NVVRRFHGTSCSSSCKFYVDLRGG--PCGESECNVCSICTHGFRLRKNVGHTARRTGMNLRFGHGMYFSSVSGKANDYAEESEKMDRSGKPIRCMFMASVAVGRAFKTYESALDTSQCPPPGYDSVIGEAGPCATLNYDEVVVYKEGAALPTFLIVYSLN 474
N+ +RFHGTSC++ C F +D +G PCG S C+VC+IC GF L KNV TAR T LR+G G+Y SSVSGKANDYA S K G +RCMF+A+VAVG+AF T S L S CPP GY SV+GE G LN+DEVVVYKE A LPT LIVY+L
Sbjct: 381 NLRQRFHGTSCNAGCNFMIDPQGATAPCGLSSCSVCNICMLGFNLGKNVARTARATRFPLRYGPGVYLSSVSGKANDYAGRSAKTGSDGTELRCMFVANVAVGKAFNTKSSNLPQSACPPLGYQSVVGEVG--QALNFDEVVVYKEAAVLPTHLIVYALR 538
BLAST of mRNA_F-serratus_M_contig6967.18073.1 vs. uniprot
Match: D8LKU5_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU5_ECTSI) HSP 1 Score: 188 bits (477), Expect = 2.780e-53 Identity = 95/158 (60.13%), Postives = 114/158 (72.15%), Query Frame = 1
Query: 1 NVVRRFHGTSCSSSCKFYVDLRGG--PCGESECNVCSICTHGFRLRKNVGHTARRTGMNLRFGHGMYFSSVSGKANDYAEESEKMDRSGKPIRCMFMASVAVGRAFKTYESALDTSQCPPPGYDSVIGEAGPCATLNYDEVVVYKEGAALPTFLIVYS 468
N+ +RFHGTSC+ C F VD +G PCG S C+VC+IC GF+L KNV TAR +G+ LR+G G+YFSSVSGKANDYA S K G +RCMF+A+VA G+AF T +S L S+CPP G SV+GE G LNYDEVVVYKE AALPT LIVY+
Sbjct: 520 NLRQRFHGTSCNDGCNFMVDPQGATAPCGLSSCSVCNICMLGFKLGKNVARTARASGIPLRYGTGIYFSSVSGKANDYARLSAKTGSDGAELRCMFVANVAGGKAFSTKKSHLPQSECPPSGCQSVVGEVG--HALNYDEVVVYKEEAALPTHLIVYA 675
BLAST of mRNA_F-serratus_M_contig6967.18073.1 vs. uniprot
Match: D8LKU6_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU6_ECTSI) HSP 1 Score: 175 bits (444), Expect = 1.440e-51 Identity = 79/137 (57.66%), Postives = 102/137 (74.45%), Query Frame = 1
Query: 1 NVVRRFHGTSCSSSCKFYVDLRGGPCGESECNVCSICTHGFRLRKNVGHTARRTGMNLRFGHGMYFSSVSGKANDYAEESEKMDRSGKPIRCMFMASVAVGRAFKTYESALDTSQCPPPGYDSVIGEAGPCATLNYD 411
N+ RRFHGTSCS+ C F+VDL+G PC CNVC+ICT+GF L+ NVG TA+RT + LR+G G+YFSSVSGK+NDYA+ SEK+ GK +RCMF+A+V G A+ T + +L + CPP G+DSV+GEA P T D
Sbjct: 140 NIRRRFHGTSCSAGCNFFVDLKGNPCSSRGCNVCNICTNGFMLQGNVGGTAKRTSIGLRYGEGLYFSSVSGKSNDYAQGSEKVGSDGKKVRCMFIANVTAGNAYLTQQVSLGQNMCPPAGHDSVVGEA-PIETYRTD 275 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6967.18073.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6967.18073.1 >prot_F-serratus_M_contig6967.18073.1 ID=prot_F-serratus_M_contig6967.18073.1|Name=mRNA_F-serratus_M_contig6967.18073.1|organism=Fucus serratus male|type=polypeptide|length=159bp NVVRRFHGTSCSSSCKFYVDLRGGPCGESECNVCSICTHGFRLRKNVGHTback to top mRNA from alignment at F-serratus_M_contig6967:10829..12429+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig6967.18073.1 ID=mRNA_F-serratus_M_contig6967.18073.1|Name=mRNA_F-serratus_M_contig6967.18073.1|organism=Fucus serratus male|type=mRNA|length=1601bp|location=Sequence derived from alignment at F-serratus_M_contig6967:10829..12429+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig6967:10829..12429+ >mRNA_F-serratus_M_contig6967.18073.1 ID=mRNA_F-serratus_M_contig6967.18073.1|Name=mRNA_F-serratus_M_contig6967.18073.1|organism=Fucus serratus male|type=CDS|length=954bp|location=Sequence derived from alignment at F-serratus_M_contig6967:10829..12429+ (Fucus serratus male)back to top |