mRNA_F-serratus_M_contig696.18066.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig696.18066.1 vs. uniprot
Match: D7FMN3_ECTSI (Ribosome biogenesis regulatory protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMN3_ECTSI) HSP 1 Score: 397 bits (1019), Expect = 1.790e-135 Identity = 209/277 (75.45%), Postives = 230/277 (83.03%), Query Frame = 1
Query: 1 QFDLRNLLVVNPHQVDEEALTRQAGVYLERQAQAAVQSLVNRLFVLPTTSSEVGPVARLPAKEESVLPRAKPVPAPKAETKWDRFAREKGITGKKRSRMVWDNDMKEWRPRHGYKRANDGVLNHPIVEIKEGKDDTIDPWAEARAEKKARVNKNITKRAKNQERAPGAAKPGIPVDLASGRKDRAGVAAAGGGLEGGVAMKRGKVGTKGALEMVQQSTASMGKFDERRPAEPERRNHKGVRRAFKPVTVASGDETRSHIKILNAVMIGKSKSADKEG 831
QFDLRNLLVVNPHQVDE+AL + YL+ QAQAAVQSL+NRLFVLPT SEVGPVA LPAKEES+LPRAKPVPAPKAET+WDRFA+EKGITG KRSRMVWD+D+KEWRPRHGYKRANDGVLNH IVE+K GKD +PW+EAR EKK RV KN++ RAKN ERA G AKPGIPVDL KD +G GG KRGK TKGALE+VQ STASMGKFDERR AEPERR KGVRRAFKPVTV SG+ET+ H+KILN+VMIGKSKSADK+G
Sbjct: 31 QFDLRNLLVVNPHQVDEQALADDSEEYLKGQAQAAVQSLINRLFVLPTVPSEVGPVATLPAKEESILPRAKPVPAPKAETRWDRFAKEKGITGSKRSRMVWDDDLKEWRPRHGYKRANDGVLNHAIVEVKPGKDPMANPWSEAREEKKGRVEKNLSNRAKNVERAGGGAKPGIPVDLLPSAKDGSG--------GGGAPAKRGKANTKGALELVQHSTASMGKFDERRHAEPERRKGKGVRRAFKPVTVGSGEETQGHLKILNSVMIGKSKSADKDG 299
BLAST of mRNA_F-serratus_M_contig696.18066.1 vs. uniprot
Match: A0A836CG24_9STRA (Ribosome biogenesis regulatory protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG24_9STRA) HSP 1 Score: 239 bits (611), Expect = 3.630e-70 Identity = 146/286 (51.05%), Postives = 181/286 (63.29%), Query Frame = 1
Query: 4 FDLRNLLVVNPHQVDEEALTRQAG----VYLERQAQAAVQSLVNRLFVLPTTSSEVGPVARLPAKEESVLPRAKPVPAPKAETKWDRFAREKGITGKKRSRMVWDNDMKEWRPRHGYKRANDGVLNHPIVEIKEGKDDTIDPWAEARAEKKARVNKNITKRAKNQERAPGA-AKPGIPVDLASGRKDRAGVAAAGGGLEGGVAMKRGKVGTKGALEMVQQSTASMGKFDERRPAEPERRNHKG-----VRRAFKPVTVASGDETRSH--IKILNAVMIGKSKSADK 825
FDLRNL+ NPH VD +L A +ER A+ VQ L+ +LF LP+ S VGPVA LPA+E + +PR KP+P P+AETKW++FA+EKGI KK SRMVWD D KEWRP GYKR NDGVL+ PIVE K D DPW EARA KKARV KN+T+RAKN R+ G GIP+D+ + AG A + KRG+ T+ ALE+ Q STASMGKFD +R EPER+ G R+ FKP+ V G +T +KILN+VMI + K +K
Sbjct: 28 FDLRNLVAFNPHAVDAASLGSTAEERERALMER-ARMGVQQLMAKLFTLPSEPSNVGPVAHLPAEEVTQVPREKPLPKPRAETKWEKFAKEKGIKAKKSSRMVWDEDHKEWRPNWGYKRGNDGVLDLPIVEHKSNADIMADPWTEARAAKKARVVKNLTQRAKNDMRSSGKNPMAGIPLDMMPAARGLAGSAGS---------RKRGRDSTRKALELAQASTASMGKFDSKRAGEPERKKGAGGVAAAARQKFKPLVVKGGAKTEGEGALKILNSVMINRDKRKNK 303
BLAST of mRNA_F-serratus_M_contig696.18066.1 vs. uniprot
Match: W7U7Y9_9STRA (Ribosome biogenesis regulatory protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U7Y9_9STRA) HSP 1 Score: 184 bits (468), Expect = 4.840e-52 Identity = 130/302 (43.05%), Postives = 167/302 (55.30%), Query Frame = 1
Query: 4 FDLRNLLVVNPHQVDEEALTRQAGVYLERQAQAAVQSLVNRLFVLPTTSSEVGPVARLPAKEESVLPRAKPVPAPKAETKWDRFAREKGITGKKRSRMVWDNDMKEWRPRHGYKRANDGVLNHPIVEIKEGKDDTIDPWAEARAEKKARVNKNITKRAKNQER-------APG-------------------AAKP-----GIPVDLASGRKDRAGVAAAGG----GLEGGVAM--KRGKVGTKGALEMVQQSTASMGKFDERRPAEPERRNHKGVRRAFKPVTVASGDETRSHIKILNAVM 798
+DL +L V+ H VD E YL A VQ +VNRLF LP S GPV LP + LPRAKP+P + T+W++FA+EKGIT KKRSR VWD D +EWRPR GYKRA +GV + IVE+K G+D +DPW +A+ K ARV KN+ ++AKN+ APG AA P G+PVDL + +K V A GG EGG A+ KRGKV ALE+ QQSTAS+GKFD + EPE++ V++ K VA K +N+V+
Sbjct: 35 YDLHHLAAVDSHPVDLEGFQSDPEKYLWESATFGVQGIVNRLFELPYEQSNTGPVVTLPGAT-TYLPRAKPLPEARQATRWEKFAKEKGITKKKRSRTVWDEDAQEWRPRWGYKRAKNGVEDAAIVEVKPGEDPNVDPWTQAQEAKSARVAKNLQQQAKNKGMGRGTSILAPGTKPGKRVGKREREAMAAATAAGPPAPVYGLPVDLPATKKH---VQAPGGPGAASEEGGKAVPKKRGKVAGLKALEVAQQSTASLGKFDAKLAGEPEKK----VKKVRKVAPVADSKSLVEESKRMNSVL 328
BLAST of mRNA_F-serratus_M_contig696.18066.1 vs. uniprot
Match: A0A7S2UUR0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUR0_9STRA) HSP 1 Score: 184 bits (467), Expect = 1.320e-50 Identity = 120/281 (42.70%), Postives = 164/281 (58.36%), Query Frame = 1
Query: 4 FDLRNLLVVNPHQVDEEALTRQAGVYLERQAQAAVQSLVNRLFVLPTTSSEVGPVARLP------AKEESVLPRAKPVPAPKAETKWDRFAREKGITGKK-RSRMVWDNDMKEWRPRHGYKRANDGVLNHPIVEIKEGKDDTIDPWAEARAEKKARVNKNITKRAKNQERAPG--AAKPGIPVDLASGRKDRAGVAAAGGGLEGGVAMKRGKVGTKGALEMVQQSTASMGKFDERRPAEPERRNHKGVRRAFKPVTVASGD-ETRSHIKILNAVMIGKSKS 816
FDL NL + H V+ + L + +L Q L++RLF LP SSEVGP+A LP A LPR K +P K ET+W++FAREKGI + R +MVWD ++RPR GY+R + ++HPIVE+KEG D DPW + KK RV KN+ ++ KNQ A AA GIPVDL S A A G ++ +KRG+ T+ L +VQ STASMGKFDE R EPE++ +G RR F+P+ A E+++ +K + A+++ K KS
Sbjct: 180 FDLHNLCCSDTHPVELDKLRKGPEKHLLDLTTENAQDLIHRLFDLPAKSSEVGPIAELPGVLHFSAPGAMRLPREKRLPELKEETRWEKFAREKGIRKTQAREKMVWDEATGKYRPRFGYQRGGEDHMDHPIVEVKEGHDPLADPWTAKKVAKKGRVAKNMLQQMKNQLHAGNTRAAPAGIPVDLVSATARSVASARAAGTMK--PVLKRGRDKTEKTLRLVQNSTASMGKFDEVRQGEPEKKARQGKRRKFQPLLSAQPKAESQAQLKTVQAILVNKGKS 458
BLAST of mRNA_F-serratus_M_contig696.18066.1 vs. uniprot
Match: A0A7S2WL01_9STRA (Ribosome biogenesis regulatory protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WL01_9STRA) HSP 1 Score: 178 bits (452), Expect = 8.850e-50 Identity = 123/294 (41.84%), Postives = 164/294 (55.78%), Query Frame = 1
Query: 10 LRNLLVVNPHQVDEEALT-----RQAGVYLERQAQAAVQSLVNRLFVLPTTSSEVGPVARLPAKEESVLPRAKPVPAPKAETKWDRFAREKGITGKKRSRMVWDNDMKEWRPRHGYKRANDGVLNHPIVEIKEGKDDTIDPWAEARAEKKARVNKNITKRAKNQERAPG---AAKPGIPVDLASGRKDRAGVAAAGGGLEGGVAMKRGKVGTKGALEMVQQSTASMGKFDERRPAEPERRNHKGVRRAFKPVTVASG---DETRSHIKILNAVMIGKSKSADKEGGPQLKGVAG 858
LR+L P +DE ++ R +L R A A Q L+N L+ LPT +++GPVA LP +LPR K +P P+AET+W++FA+EKGI KKR RMVWD ++WRPR+GY+RAND ++PI+E+K G+D DPW R EK+ARV+KN R +N ERA K G+PVDL GG E K+GK G AL + Q STASMGKFD R +EPE++ G RR + G +E + K+L V+ K + LKG AG
Sbjct: 42 LRHLAGTEPTPLDEGEMSKLGNGRSLEKFLHRAATEAAQQLINALWRLPTQQNDMGPVATLPPST-LILPREKRLPQPRAETRWEKFAKEKGIRNKKRDRMVWDEAEQQWRPRYGYQRAND-ESSYPIMEVKAGEDPFDDPWDRLRQEKRARVDKNERNRQRNAERAERQITGKKAGLPVDL--------------GGNE-----KKGKQGVSKALNLAQSSTASMGKFDVRVSSEPEQKKVSGTRRKLPANDLGRGGMKNEADRNSKLLARVLNAADKPKET-----LKGKAG 309
BLAST of mRNA_F-serratus_M_contig696.18066.1 vs. uniprot
Match: A0A485KFR7_9STRA (Ribosome biogenesis regulatory protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KFR7_9STRA) HSP 1 Score: 166 bits (421), Expect = 1.430e-45 Identity = 117/298 (39.26%), Postives = 163/298 (54.70%), Query Frame = 1
Query: 4 FDLRNLLVVNPHQVDEEALTRQAGVYLERQAQAAVQSLVNRLFVLPTTSSEVGPVARLPAKEESVLPRAKPVPAPKAETKWDRFAREKGITGKKRSRMVWDNDMKEWRPRHGYKRANDGVLNHPIVEIKEGKDDTIDPWAEARAEKKARVNKNITKRAKNQERAPGAAKP--------GIPVDLASGRKDRAGVAAAGGGLEGGVAMKRGKVGTKGALEMVQQSTASMGKFDERRPAEPERRNHKGVRRAFKPVTVASGDETRSHIKILNAVM-----IGKSKSA----DKEGGPQLK 846
+DL NL + H + ++ + L+ A+ VQ L+N++F LP +++GP+A+LP + +PR KP+P PK ET+W++FAREKGI KK RMVWD + W P+ GYKRAND LN +K G D DPW EA+ +K RV KN+ +A N + G A G+PV+L + +A +RGK GTK AL+ VQ STASMGKFD++R E ER+ H G R F VT A E + +L V+ GK+KSA D++ P+ K
Sbjct: 30 YDLGNLAAFDTHPFKVQNVSDETE--LKAYARDNVQLLINQVFELPRDMTDMGPMAKLPVPS-TTIPREKPLPKPKVETRWEKFAREKGIKNKKEGRMVWDEAKQIWAPKWGYKRANDD-LNDWAKPVKGGADPYADPWTEAKQDKAERVQKNLRNQANNLKMGRGKAPTLPVSKTPLGVPVELLNTDDKKA--------------KQRGKEGTKAALQKVQFSTASMGKFDKKREGEGERK-HVGKRNKFLSVTGAEKTEKERSMNVLQHVLGREENKGKAKSASHGDDEDRDPKKK 308
BLAST of mRNA_F-serratus_M_contig696.18066.1 vs. uniprot
Match: A0A1V9ZJR0_9STRA (Ribosome biogenesis regulatory protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZJR0_9STRA) HSP 1 Score: 166 bits (421), Expect = 1.460e-45 Identity = 118/291 (40.55%), Postives = 160/291 (54.98%), Query Frame = 1
Query: 4 FDLRNLLVVNPHQVDEEALTRQAGVYLERQAQAAVQSLVNRLFVLPTTSSEVGPVARLPAKEESVLPRAKPVPAPKAETKWDRFAREKGITGKKRSRMVWDNDMKEWRPRHGYKRANDGVLNHPIVEIKEGKDDTIDPWAEARAEKKARVNKNITKRAKNQERAPGAAKPGIPVDLASGRKDRAGVAAAGGGLEGGVAMKRGKVGTKGALEMVQQSTASMGKFDERRPAEPERRNHKGVRRAFKPVTVASGDETRSHIKILNAVM-----IGKSKSADKEGGPQLKGVAGR 861
+DL NL + H + T + + + A+ VQ L+N++F LP +++GP+A+LPA +V+PR KP+P PK ET+W++FAREKGI KK+ RMVWD + W PR GYKRAND +N V +K+ D DPW E + K RV KN+ +A N + G +P +PV A K G+ A +RGK GTK AL+ VQ STASMGKFD+ R E ER+ G R F VT A E + +LN V+ GK+K+ E P GR
Sbjct: 30 YDLGNLAAFDTHPFGVKNTTDEKEI--KAAARENVQLLINQIFDLPRQMTDMGPMAQLPAGS-TVIPREKPLPKPKVETRWEKFAREKGIDNKKKDRMVWDEAKQAWAPRWGYKRANDD-MNDWAVPVKKNDDPFADPWTERKQAKAERVQKNLRNQANNLKNGRGI-QPSVPVPSAP--KTPLGIPVEMLDTADKKAKQRGKEGTKAALQKVQFSTASMGKFDKMRTGEAERKQT-GKRNKFLSVTGAEKTEKERSMSVLNHVLGREENKGKAKAPTAEDEPAKGKKRGR 312
BLAST of mRNA_F-serratus_M_contig696.18066.1 vs. uniprot
Match: A0A1V9ZCQ0_9STRA (Ribosome biogenesis regulatory protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZCQ0_9STRA) HSP 1 Score: 164 bits (415), Expect = 1.020e-44 Identity = 108/273 (39.56%), Postives = 151/273 (55.31%), Query Frame = 1
Query: 4 FDLRNLLVVNPHQVDEEALTRQAGVYLERQAQAAVQSLVNRLFVLPTTSSEVGPVARLPAKEESVLPRAKPVPAPKAETKWDRFAREKGITGKKRSRMVWDNDMKEWRPRHGYKRANDGVLNHPIVEIKEGKDDTIDPWAEARAEKKARVNKNITKRAKNQERAPGA--------AKPGIPVDLASGRKDRAGVAAAGGGLEGGVAMKRGKVGTKGALEMVQQSTASMGKFDERRPAEPERRNHKGVRRAFKPVTVASGDETRSHIKILNAVM 798
+DL NL + H + LT + + + A+ VQ L+N +F LP ++VGP+++LP +++PR KP+P PK ET+W++FAREKGI KK+ RMVWD + + W PR GYKRAND + + I +K+ D DPW E + K RV KN+ +A N + G A GIPV+L + + +RGK GTK AL+ VQ STASMGKFD+ R E ER+ KG R F VT + E + +LN V+
Sbjct: 30 YDLGNLAAFDTHPFIVKNLTNENEI--KASARDNVQLLINAIFDLPREMTDVGPMSKLPVGT-TLIPREKPLPKPKVETRWEKFAREKGIENKKKERMVWDEEKQAWAPRWGYKRANDDIHDWAIP-VKKNDDPYADPWTERKQAKAERVQKNMRNQANNLKNGRGITPSVPVPKAPVGIPVELLDTQDKKT--------------KQRGKEGTKAALQKVQFSTASMGKFDKMRQGEAERKQ-KGKRNKFLSVTGSEQTEKERSMSVLNHVL 283
BLAST of mRNA_F-serratus_M_contig696.18066.1 vs. uniprot
Match: A0A6G0WAM1_9STRA (Ribosome biogenesis regulatory protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WAM1_9STRA) HSP 1 Score: 164 bits (414), Expect = 1.710e-44 Identity = 114/285 (40.00%), Postives = 160/285 (56.14%), Query Frame = 1
Query: 4 FDLRNLLVVNPHQVDEEALTRQAGVYLERQAQAAVQSLVNRLFVLPTTSSEVGPVARLPAKEESVLPRAKPVPAPKAETKWDRFAREKGITGKKRSRMVWDNDMKEWRPRHGYKRANDGVLNHPIVEIKEGKDDTIDPWAEARAEKKARVNKNITKRAKN-------QERAPGAAKP-GIPVDLASGRKDRAGVAAAGGGLEGGVAMKRGKVGTKGALEMVQQSTASMGKFDERRPAEPERRNHKGVRRAFKPVTVASGDETRSHIKILNAVM-----IGKSKSA 819
+DL NL + H + ++ + L+ A+ VQ L+N++F LP +++GP+A+LP +V+PR KP+P PK ET+W++FAREKGI KK RMVWD + W P+ GYKRAND LN + +K+G+D DPW E + EK RV KN+ +A N Q P + P G+PV+L + +A +RGK GTK AL+ VQ STASMGKFD++R E ER+ G R F VT A E + +L V+ GK+KS+
Sbjct: 31 YDLGNLAAFDTHPFKVQNVSDETE--LKVFARDNVQLLINQIFELPREMTDMGPMAQLPVGS-TVIPREKPLPKPKVETRWEKFAREKGIKNKKEGRMVWDEAKQAWAPKWGYKRANDD-LNDWAMPVKQGQDPYSDPWTENKQEKTERVQKNLRNQANNLKHGRGKQPTMPVSKTPLGVPVELLNTDDKKA--------------KQRGKEGTKAALQKVQFSTASMGKFDKKREGEGERKQT-GKRNKFLSVTGAEKTEKERSMNVLQHVLGREENKGKAKSS 296
BLAST of mRNA_F-serratus_M_contig696.18066.1 vs. uniprot
Match: A0A067CPT1_SAPPC (Ribosome biogenesis regulatory protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CPT1_SAPPC) HSP 1 Score: 162 bits (411), Expect = 4.190e-44 Identity = 114/294 (38.78%), Postives = 161/294 (54.76%), Query Frame = 1
Query: 4 FDLRNLLVVNPHQVDEEALTRQAGVYLERQAQAAVQSLVNRLFVLPTTSSEVGPVARLPAKEESVLPRAKPVPAPKAETKWDRFAREKGITGKKRSRMVWDNDMKEWRPRHGYKRANDGVLNHPIVEIKEGKDDTIDPWAEARAEKKARVNKNITKRAKNQERA---------PGAAKPGIPVDL--ASGRKDRAGVAAAGGGLEGGVAMKRGKVGTKGALEMVQQSTASMGKFDERRPAEPERRNHKGVRRAFKPVTVASGDETRSHIKILNAVM-----IGKSKSADKEGGP 837
+DL NL + H + + + L+ A+ VQ L+N++F LP +++GP+A+LP +V+PR KP+P PK ET+W+++AREKG+ KK+ RMVWD + W PR GYKRAND + + V +K+ D DPW E + K RV KN+ +A N +RA P A GIPV++ S +K + +RGK GTK AL+ VQ STASMGKFD+ R E ER+ G R F VT A E + +LN V+ GK+K++ E P
Sbjct: 30 YDLGNLAAFDTHPFSVKNASDEKE--LKASARDNVQLLINQIFELPRQMTDMGPMAQLPTGT-TVIPREKPLPKPKPETRWEKYAREKGVDNKKKDRMVWDEAKQAWAPRWGYKRANDDMQDW-AVPVKKNDDPFADPWTERKQAKNERVQKNLRNQAANVKRAGGMQPSVPVPKATPVGIPVEMLNTSDKKMK----------------QRGKEGTKAALQKVQFSTASMGKFDKMRTGEAERKQT-GKRNKFLSVTGAEKTEKERSMHVLNHVLGREENKGKAKASTGEDDP 302 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig696.18066.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig696.18066.1 >prot_F-serratus_M_contig696.18066.1 ID=prot_F-serratus_M_contig696.18066.1|Name=mRNA_F-serratus_M_contig696.18066.1|organism=Fucus serratus male|type=polypeptide|length=191bp MVWDNDMKEWRPRHGYKRANDGVLNHPIVEIKEGKDDTIDPWAEARAEKKback to top mRNA from alignment at F-serratus_M_contig696:127890..132873- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig696.18066.1 ID=mRNA_F-serratus_M_contig696.18066.1|Name=mRNA_F-serratus_M_contig696.18066.1|organism=Fucus serratus male|type=mRNA|length=4984bp|location=Sequence derived from alignment at F-serratus_M_contig696:127890..132873- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig696:127890..132873- >mRNA_F-serratus_M_contig696.18066.1 ID=mRNA_F-serratus_M_contig696.18066.1|Name=mRNA_F-serratus_M_contig696.18066.1|organism=Fucus serratus male|type=CDS|length=1146bp|location=Sequence derived from alignment at F-serratus_M_contig696:127890..132873- (Fucus serratus male)back to top |