mRNA_F-serratus_M_contig694.18040.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig694.18040.1 vs. uniprot
Match: D7G8Q2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8Q2_ECTSI) HSP 1 Score: 479 bits (1234), Expect = 3.030e-159 Identity = 236/292 (80.82%), Postives = 255/292 (87.33%), Query Frame = 1
Query: 55 DDAWHRTVILPNDILGRSPSAESDIEWETEFSHRIWGCDLLQEAGVLLRLPQVVMCTAQNLLQRFFYRKPLTKFDAFSVAMACMFLAMKIEEDPRSPRAVVLVFHRMFERRVGEGRPGVISQASMKVLRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDEEGDVSQRAWNYVNDSLRTDLSLRFRSEMIACAAIYMASRSLKIKLPDNPPWWVLFNADLKAMGEICNTILALYERPKIAFIEPLCERSVFRKGGPLRRPPTDENTLEVQKTPPPEGVEGSSAA 930
D+AWHRT+ILP DIL PS E +++WETE SHRIWGC+LLQEAGVLLRLPQVVMCTAQNLLQRFFYRKPLTKFDAFSVAM CM LAMKIEEDPR PRAVVLVFHRMFERR+G VI S++VLRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELD EGDVSQRAWNYVNDSLRTDLSLRFRSE+IACAAIYMASRSL IKLPDNPPWWVLFNAD++ MGEICNTILALY RPK+AF+EPLC+ SVFR+GGPLR +N EV P +GVE + AA
Sbjct: 58 DEAWHRTIILPRDILDNPPSGEHEVDWETESSHRIWGCELLQEAGVLLRLPQVVMCTAQNLLQRFFYRKPLTKFDAFSVAMGCMLLAMKIEEDPRQPRAVVLVFHRMFERRIGVDPAIVIPPESLRVLRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDIEGDVSQRAWNYVNDSLRTDLSLRFRSEVIACAAIYMASRSLGIKLPDNPPWWVLFNADMQEMGEICNTILALYHRPKVAFLEPLCDNSVFRRGGPLRIDAVVQNIQEVYA--PADGVEETPAA 347
BLAST of mRNA_F-serratus_M_contig694.18040.1 vs. uniprot
Match: A0A835YUR3_9STRA (Cyclin-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUR3_9STRA) HSP 1 Score: 334 bits (857), Expect = 3.240e-105 Identity = 172/302 (56.95%), Postives = 215/302 (71.19%), Query Frame = 1
Query: 58 DAWHRTVILPNDILGRSPSAESDIEWETEFSHRIWGCDLLQEAGVLLRLPQVVMCTAQNLLQRFFYRKPLTKFDAFSVAMACMFLAMKIEEDPRSPRA--VVLVFHRMFERRVGEGRPGVISQASMKV---LRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDEEGDVSQRAWNYVNDSLRTDLSLRFRSEMIACAAIYMASRSLKIKLPDNPPWWVLFNADLKAMGEICNTILALYERPKIAFIEPLCERSVFRKGGPLRR------PPTDENTLEVQKTPPPEGVEGSSAA 930
+ WH V+LP +IL PS + ++WETE HR WGC+L+QEAG+LLRLPQVVMCT Q LLQRF+YRK LTKFDAFSVAM C+ LA K+EE R VV+VFHRM+ RR G P + V L+ EM+RVE +VLK+LGFGFYNIMDHPHKFILYY+RVL + E +QR W+Y+ND+LRTDL LR+R+E+IACAAIYMA+R+L+++LP +PPWW LFNA+L +G+ICN ILALY++PK+ ++EPL SVF GG +RR P E LE G GS AA
Sbjct: 1 EPWHSVVLLPEEILANPPSKDHGVDWETETQHRAWGCELIQEAGILLRLPQVVMCTGQTLLQRFYYRKSLTKFDAFSVAMGCVLLAAKLEEAIGHTRVRDVVMVFHRMYLRR--RGLPLEFLELGGTVYAELKTEMIRVERYVLKDLGFGFYNIMDHPHKFILYYVRVLGWELEA--TQRVWSYLNDALRTDLCLRYRAEVIACAAIYMAARALRLRLPQSPPWWRLFNAELPEIGQICNAILALYKKPKVVWLEPLHSGSVFAPGGAVRRCDPVPLPGPKEVLLEAMDIADAAGAAGSDAA 298
BLAST of mRNA_F-serratus_M_contig694.18040.1 vs. uniprot
Match: A0A7S4D4U7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4U7_HETAK) HSP 1 Score: 306 bits (785), Expect = 1.450e-94 Identity = 148/271 (54.61%), Postives = 195/271 (71.96%), Query Frame = 1
Query: 58 DAWHRTVILPNDILGRSPSAESDIEWETEFSHRIWGCDLLQEAGVLLRLPQVVMCTAQNLLQRFFYRKPLTKFDAFSVAMACMFLAMKIEEDPRSPRAVVLVFHRMFERRVGEG-RPGVISQASMKVLRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDEEGDVSQRAWNYVNDSLRTDLSLRFRSEMIACAAIYMASRSLKIKLPDNPPWWVLFNADLKAMGEICNTILALYERPKIAFIEPLCERSVFRKGGPLRRPPTD 867
+ WH LP +IL SPS + + WE E+ R+WGC+L+QEAGVLLRLPQVVM T QNLLQRFFYR+ L +FDAF+VAM C+FL+ K+EE P+ R ++ VFH + + R GE P + + + E++++E HVLKELGF FYNIMDHPHKFILYY++VL D ++QRAW+YVNDSLRTDL LR + +IACAAIYMA+R L++ LP +PPWW LF+A L+ + IC+ ILALYE K ++EPL E +VF++G PT+
Sbjct: 33 EPWHMVQTLPAEILDNSPSKKDGVPWEQEYKFRVWGCELVQEAGVLLRLPQVVMATGQNLLQRFFYRRSLKRFDAFTVAMGCLFLSCKVEEKPKRLREILFVFHHISQVRRGEPITPLELGAQTYMQWKSELIKMERHVLKELGFSFYNIMDHPHKFILYYIKVL--DGSSALAQRAWSYVNDSLRTDLCLRHGAAVIACAAIYMAARVLRVPLPRSPPWWELFSAQLRDVAAICDAILALYEMEKTPWMEPLSEANVFKRGSKAWDEPTE 301
BLAST of mRNA_F-serratus_M_contig694.18040.1 vs. uniprot
Match: W7U1X8_9STRA (Ania-6a type cyclin n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1X8_9STRA) HSP 1 Score: 274 bits (701), Expect = 1.630e-79 Identity = 144/281 (51.25%), Postives = 184/281 (65.48%), Query Frame = 1
Query: 55 DDAWHRTVILPNDILGRSPSAESDIEWETEFSHRIWGCDLLQEAGVLLRLPQVVMCTAQNLLQRFFYRKPLTK-------------------FDAFSVAMACMFLAMKIEEDPRSPRAVVLVFHRMFERRVGEGRPGVISQASMKV--LRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDEEGDVSQRAWNYVNDSLRTDLSLRFRSEMIACAAIYMASRSLKIKLPDNPPWWVLFNADLKAMGEICNTILALY-------ERPKIAFIEPL 813
D WH V+LP +L SPS + E HRI+GC+L+QEAG+LLR PQVVM TAQ L RFFYR+ LT FDAF+VAM C+FLA K+EE PR+PR V+ VFH M RR G G P ++ S++ LR+ +L +E +VLKELGFGFY+IMDHPHKFILYY++ L D ++QRAWNY+NDSLR D +RFR+E+IAC A+YMASR L +KLPD+PPW+ LF A L+ M + N IL+LY E + ++EPL
Sbjct: 39 DGEWHEVVLLPRHVLRESPSRRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRALTSERAQDVPEPGPGKSPRVFLFDAFTVAMGCVFLASKLEEKPRAPRDVLFVFHHMCRRRRGLG-PSLLEVTSVRYHDLREALLMIEKYVLKELGFGFYSIMDHPHKFILYYIKTL--DGTPTLAQRAWNYLNDSLRLDCCVRFRAELIACTALYMASRDLGVKLPDDPPWFALFGASLEEMRHVGNVILSLYREKDEEGEEAPLRWLEPL 316
BLAST of mRNA_F-serratus_M_contig694.18040.1 vs. uniprot
Match: W2R3U0_PHYPN (Uncharacterized protein (Fragment) n=11 Tax=Phytophthora TaxID=4783 RepID=W2R3U0_PHYPN) HSP 1 Score: 251 bits (640), Expect = 5.380e-73 Identity = 128/259 (49.42%), Postives = 182/259 (70.27%), Query Frame = 1
Query: 76 VILPNDILGRSPSAESDIEWETEFSHRIWGCDLLQEAGVLLRLPQVVMCTAQNLLQRFFYRKPLTKFDAFSVAMACMFLAMKIEEDPRSPRAVVLVFHRMFERRVGEGRPGVISQ-------ASMKVLRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDEEGDVSQRAWNYVNDSLRTDLSLRFRSEMIACAAIYMASRSLKIKLPDNPPWWVLFNADLKAMGEICNTILALYERPKIAFIEPLCERSVF 831
V+LP L RSPS E DI+ + E HR +GC+L+QEAGVLLRLPQVVM TAQ LLQRF+YRK L +FDAF VA++C+FLA K+EE P+ + VV VF+ MF RR + + +SQ A+ R ++ VE VL +LGF Y++ +HPHK++LYY++VL D ++Q+AW Y+NDSLRTDL +R+++++IACAAI++ASR + LP+NPPW++LF+ D + + I+ LY++ KI ++EPL E + F
Sbjct: 10 VVLPASSLARSPSLEDDIKPDIERLHRSFGCELIQEAGVLLRLPQVVMATAQTLLQRFYYRKSLRQFDAFRVAVSCLFLAAKVEEKPKRIKDVVGVFYAMFRRR--KWQRSTVSQQLVDLDGATFSQWRMWLIMVERQVLIDLGFSIYSVTEHPHKYVLYYVKVL--DGSSALAQQAWGYINDSLRTDLCVRYKAQVIACAAIFLASRFQGVALPENPPWYLLFDVDKTQLYAVSVVIMELYKQEKIQWLEPLTETNPF 264
BLAST of mRNA_F-serratus_M_contig694.18040.1 vs. uniprot
Match: F0YGC1_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGC1_AURAN) HSP 1 Score: 244 bits (622), Expect = 2.060e-72 Identity = 119/238 (50.00%), Postives = 164/238 (68.91%), Query Frame = 1
Query: 79 ILPNDILGRSPSAESDIEWETEFSHRIWGCDLLQEAGVLLRLPQVVMCTAQNLLQRFFYRKPLTKFDAFSVAMACMFLAMKIEEDPRSPRAVVLVFHRMFERRVGEGRPGVISQASMKVLRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDEEGDVSQRAWNYVNDSLRTDLSLRFRSEMIACAAIYMASRSLKIKLPDNP--PWWVLFNADLKAMGEICNTILALYER 786
+LP D+L SPS + E++ R+WGC+L+QEAG+LLRLPQVVMCT QN+ QRF+YR L +FDAF AM C FLA KIEE P+ R ++VFH ++ R + + E+++VE H+LKELGF FY I+DH HKFIL+Y+++L+ D G+++Q AW+Y+ND LRTD +LR+RSE++ACAAIYMA+R L+ KLPD+P PWW +F + + +LALY R
Sbjct: 2 LLPADMLENSPSKRDGVSAADEYAQRVWGCELIQEAGILLRLPQVVMCTGQNIFQRFYYRVSLKRFDAFLSAMGCFFLACKIEEKPKRLRECLMVFHFVYRVRTKSSATLELGGVRYNGWKHELVKVERHILKELGFSFY-IIDHSHKFILFYVKLLDCD--GELAQEAWSYLNDCLRTDAALRYRSEVLACAAIYMAARRLQHKLPDDPAAPWWEVFRVGKADLDAVVAAVLALYVR 236
BLAST of mRNA_F-serratus_M_contig694.18040.1 vs. uniprot
Match: A0A3F2S4S2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S4S2_9STRA) HSP 1 Score: 246 bits (628), Expect = 4.080e-72 Identity = 123/259 (47.49%), Postives = 180/259 (69.50%), Query Frame = 1
Query: 76 VILPNDILGRSPSAESDIEWETEFSHRIWGCDLLQEAGVLLRLPQVVMCTAQNLLQRFFYRKPLTKFDAFSVAMACMFLAMKIEEDPRSPRAVVLVFHRMFERRVGEGRPGVISQ-------ASMKVLRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDEEGDVSQRAWNYVNDSLRTDLSLRFRSEMIACAAIYMASRSLKIKLPDNPPWWVLFNADLKAMGEICNTILALYERPKIAFIEPLCERSVF 831
V+LP +L RSPS++ I+ TE HR +GC+L+QEAGVLLRLPQVVM TAQ L QRF+YRK L +FDAF VA++C+FLA K+EE P+ + V+ VF+ M RR + + V+SQ A+ R ++ VE VL ++GF YN+ +HPHK++LYY++VL D ++QRAW Y+NDSLR+DL +R+ +++IAC+AI++ASR + LP+NPPW+ LF + + + + I+ LY++ KI ++EPL E + F
Sbjct: 9 VVLPASVLTRSPSSQDGIDPSTEHQHRFFGCELIQEAGVLLRLPQVVMATAQTLFQRFYYRKSLRQFDAFRVAISCLFLAAKVEERPKRIKDVLTVFYAMLRRR--KWKRTVVSQQLVDLDGATYSQWRMWLIMVERQVLIDMGFSVYNVTEHPHKYVLYYVKVL--DGSSQLAQRAWGYINDSLRSDLCVRYSAQVIACSAIFLASRYQGVALPENPPWYSLFGVNKQQLYAVSVAIMELYKQEKIEWLEPLTETNPF 263
BLAST of mRNA_F-serratus_M_contig694.18040.1 vs. uniprot
Match: A0A0P1B0R9_PLAHL (Ania-6a type cyclin n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B0R9_PLAHL) HSP 1 Score: 247 bits (631), Expect = 1.160e-71 Identity = 126/259 (48.65%), Postives = 178/259 (68.73%), Query Frame = 1
Query: 76 VILPNDILGRSPSAESDIEWETEFSHRIWGCDLLQEAGVLLRLPQVVMCTAQNLLQRFFYRKPLTKFDAFSVAMACMFLAMKIEEDPRSPRAVVLVFHRMFERRVGEGRPGVISQ-------ASMKVLRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDEEGDVSQRAWNYVNDSLRTDLSLRFRSEMIACAAIYMASRSLKIKLPDNPPWWVLFNADLKAMGEICNTILALYERPKIAFIEPLCERSVF 831
V+LP L RSPS E + E HR +GC+L+QEAGVLLRLPQVVM TAQ LLQRFFYRK L +FDAF VA++C+FLA K+EE P+ + VV VF+ M+ RR + ++Q A+ R ++ VE VL +LGF Y+I +HPHK++LYY++VL D ++Q+AW Y+NDSLRTDL +R++++ IACAAI++ASR LK+ LP+NPPW+ LF+ + + + I+ LY++ K+ ++EPL E + F
Sbjct: 10 VLLPTPSLARSPSLEDGVPPAVERMHRSFGCELIQEAGVLLRLPQVVMATAQTLLQRFFYRKSLRQFDAFRVAVSCLFLAAKVEEKPKRIKDVVSVFYAMYRRR--KWHCSTVAQQLVDLDGATFSQWRMWLIMVERQVLIDLGFSIYSITEHPHKYVLYYVKVL--DGRSALAQQAWGYINDSLRTDLCVRYKAQAIACAAIFLASRFLKVALPENPPWYKLFDVNKSQLYAVSIVIMGLYKQEKLQWVEPLTEANPF 264
BLAST of mRNA_F-serratus_M_contig694.18040.1 vs. uniprot
Match: G5AHC4_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AHC4_PHYSP) HSP 1 Score: 248 bits (632), Expect = 2.240e-71 Identity = 130/287 (45.30%), Postives = 187/287 (65.16%), Query Frame = 1
Query: 76 VILPNDILGRSPSAESDIEWETEFSHRIWGCDLLQEAGVLLRLPQVVMCTAQNLLQRFFYRKPLTKFDAFSVAMACMFLAMKIEEDPRSPRAVVLVFHRMFERRVGEGRPGVISQ-------ASMKVLRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDEEGDVSQRAWNYVNDSLRTDLSLRFRSEMIACAAIYMASRSLKIKLPDNPPWWVLFNADLKAMGEICNTILALYERPKIAFIEPLCERSVFRKGGPLRRPPTDENTLEVQKTPPPEGVE 915
V+LP +L RSPS + ETE HR +GC+L+QEAGVLLRLPQV + TAQ LLQRF+YRK L +FDAF VA++C+FLA K+EE P+ R V+ VF+ M RR + R ++Q A+ R ++ VE VL +LGF YN+ HPHKF+LYY++VL D ++Q+AW Y+NDSLR DL +R+ +++IACAAI++ASR ++ LP+ PPW+ LF+ D + + I+ LY++PKI ++EPL E + F D++ LE ++ P+ V+
Sbjct: 9 VVLPASVLARSPSRADGVSAETERLHRAFGCELIQEAGVLLRLPQVALATAQTLLQRFYYRKSLRQFDAFRVAVSCLFLAAKVEEKPKRIRDVLSVFYAMLRRR--KWRRTTVAQQLVDLEGATFAQWRMWLIMVERQVLIDLGFSVYNVAQHPHKFVLYYVKVL--DGSPQLAQQAWGYINDSLRADLCVRYSAQVIACAAIFLASRFQRVALPERPPWYQLFDVDQAQLYAVSVAIMELYKQPKIEWLEPLTETNPFA---------VDDHPLEEEQEGEPKAVD 282
BLAST of mRNA_F-serratus_M_contig694.18040.1 vs. uniprot
Match: A0A225WJ87_9STRA (Cyclin-L1 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WJ87_9STRA) HSP 1 Score: 243 bits (621), Expect = 3.050e-71 Identity = 127/281 (45.20%), Postives = 187/281 (66.55%), Query Frame = 1
Query: 76 VILPNDILGRSPSAESDIEWETEFSHRIWGCDLLQEAGVLLRLPQVVMCTAQNLLQRFFYRKPLTKFDAFSVAMACMFLAMKIEEDPRSPRAVVLVFHRMFERRVGEGRPGVISQ-------ASMKVLRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDEEGDVSQRAWNYVNDSLRTDLSLRFRSEMIACAAIYMASRSLKIKLPDNPPWWVLFNADLKAMGEICNTILALYERPKIAFIEPLCERSVFRKGGPLRRPPTDENTLEVQKTP 897
V+LP L RSPS E I +TE HR +GC+L+QEAGVLLRLPQVV+ TAQ LL RF+YRK L +FDAF VA++C+FLA K+EE P+ + V+ VF+ M RR + R ++Q A+ R ++ VE VL +LGF YN+ +HPHK++LYY++VL D ++Q+AW Y+NDSLRTDL +R+++++IACAAI++ASR + LP+NPPW+ LF+ + + + I+ LY++ K+ ++EPL E + F + P +E+ + Q+ P
Sbjct: 8 VVLPASSLQRSPSLEDGISSDTERLHRSFGCELIQEAGVLLRLPQVVLATAQTLLHRFYYRKSLRQFDAFRVAVSCLFLAAKVEEKPKRIKDVLGVFYAMLRRR--KWRRTTVTQQLVDVDGATFSQWRMWLIMVERQVLIDLGFSVYNVTEHPHKYVLYYVKVL--DGSSTLAQQAWGYINDSLRTDLCVRYKAQVIACAAIFLASRFQGVALPENPPWYSLFDVEKTQLYAVSVAIMQLYKQEKVEWLEPLTETNPFA----VDDHPVEEDEVPAQQIP 280 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig694.18040.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig694.18040.1 >prot_F-serratus_M_contig694.18040.1 ID=prot_F-serratus_M_contig694.18040.1|Name=mRNA_F-serratus_M_contig694.18040.1|organism=Fucus serratus male|type=polypeptide|length=585bp MAINSVGDDAWHRTVILPNDILGRSPSAESDIEWETEFSHRIWGCDLLQEback to top mRNA from alignment at F-serratus_M_contig694:95286..101214- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig694.18040.1 ID=mRNA_F-serratus_M_contig694.18040.1|Name=mRNA_F-serratus_M_contig694.18040.1|organism=Fucus serratus male|type=mRNA|length=5929bp|location=Sequence derived from alignment at F-serratus_M_contig694:95286..101214- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig694:95286..101214- >mRNA_F-serratus_M_contig694.18040.1 ID=mRNA_F-serratus_M_contig694.18040.1|Name=mRNA_F-serratus_M_contig694.18040.1|organism=Fucus serratus male|type=CDS|length=3510bp|location=Sequence derived from alignment at F-serratus_M_contig694:95286..101214- (Fucus serratus male)back to top |