mRNA_F-serratus_M_contig692.18022.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig692.18022.1 vs. uniprot
Match: A0A6H5KCP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCP4_9PHAE) HSP 1 Score: 427 bits (1097), Expect = 8.150e-140 Identity = 258/458 (56.33%), Postives = 317/458 (69.21%), Query Frame = 1
Query: 442 PTSTEQMDSEWAAILADDXXXXXXXXXXXXXXXXXXXPWVEGDDKNERESIDGMSGVDMIAADASQGGDLEGLNAGGGDADAEEG--------------KPRRARYKSYKERVKAEKAREESLQDTLKKLPKHHIEYLEQAQRNRDMAAARREKYTKKFFRQKKLHDIIKDRGQRAVREATRATRWPRKIKRSLEELEVGEWLEGKVRNVERQAYGAWVDVNAERDGLLHVRDMSQIFTPSAEQMVATRDSLRVRVKFVDPGAGKLGLSLVEERSHEDDLPNAPPRPKISVADVAPGAELWGYVERVTNLGAYVNVGAERPGFLLLKEIPGRPKGVDAPNVLRKNKRLRVYAKEVDPERLRIKLTCKRPRSRPRCG-SAPALASDAFSEEFEYDDT-RGRKGDGEEEGQEDLGLEREEWWNDDXXXXXXXX-----------DEGD-WFFPERGEVIP 1731
P +TE+MD+EW IL+ D EGD+ ++ ++ +S +++A DAS GG L GD E KPR Y SYK R+KAEKA+E + Q+ K K H +YL++AQRNR++AAARREKYTKKF+R KK++DI+K+RG++AVREAT ATRWPR++ R LE+L+ GEW+ GKVRNVE +YGAWVDVNAERDGLLHV+DM + FTPSA ++VAT+D ++VRVKFVDP GKLGLSLVE+ E DLP PPRP ISVADV+ GAELWGYVERVTN+GAYVNVGAE PGFLLLKEIPGRPKG+ AP VLR+NKRLRVYA+EVD E LRIKLTCKRPRS PRCG +A ALASDA +EEF+YDDT R R ED G +R+ ++D+ X DEG+ WF+PERG+VIP
Sbjct: 141 PPTTEEMDAEWEGILSGDDEQEDVD---------------EGDEDDDATAM--LSDEELLATDASVGGLL-------GDEGEEXXXXXXXXXXXXXXXRKPR-VWYDSYKARMKAEKAKEAAWQEKRKTFSKAHNDYLDEAQRNREIAAARREKYTKKFYRDKKIYDIVKERGRKAVREATWATRWPRQVTRKLEDLQEGEWITGKVRNVE--SYGAWVDVNAERDGLLHVKDMGETFTPSAGEVVATKDIIQVRVKFVDPVTGKLGLSLVEDGPREGDLPLPPPRPPISVADVSRGAELWGYVERVTNMGAYVNVGAEVPGFLLLKEIPGRPKGLSAPQVLRRNKRLRVYAREVDREGLRIKLTCKRPRSLPRCGPAAAALASDADAEEFDYDDTARVRYS-------EDDGWDRDNEYDDEMEVEXGMNEFXXXXXXXXXDEGEEWFYPERGQVIP 564
BLAST of mRNA_F-serratus_M_contig692.18022.1 vs. uniprot
Match: D8LK22_ECTSI (30S ribosomal protein S1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK22_ECTSI) HSP 1 Score: 416 bits (1070), Expect = 1.070e-137 Identity = 245/394 (62.18%), Postives = 302/394 (76.65%), Query Frame = 1
Query: 616 MIAADASQGG----DLEGLNAGGGDADAEEGKPRRAR--YKSYKERVKAEKAREESLQDTLKKLPKHHIEYLEQAQRNRDMAAARREKYTKKFFRQKKLHDIIKDRGQRAVREATRATRWPRKIKRSLEELEVGEWLEGKVRNVERQAYGAWVDVNAERDGLLHVRDMSQIFTPSAEQMVATRDSLRVRVKFVDPGAGKLGLSLVEERSHEDDLPNAPPRPKISVADVAPGAELWGYVERVTNLGAYVNVGAERPGFLLLKEIPGRPKGVDAPNVLRKNKRLRVYAKEVDPERLRIKLTCKRPRSRPRCG-SAPALASDAFSEEFEYDDT---RGRKGDGEEEGQE------------DLGLEREEWWNDDXXXXXXXXDEGDWFFPERGEVIP 1731
++A DAS+GG + EG + E G+ R+ R Y SYK R+KAEKA+E + Q+ K K H +YL++AQRNR++AAARREKYTKKF+R KK++DI+K+RG++AVREAT ATRWPR++ R LE+L+ GEW++GKVRNVE +YGAWVDVNAERDGLLHV+DM + FTPSA ++VAT+D ++ RVKFVDP GKLGLSLVE+ E DLP PPRP ISVADV+ GAELWGYVERVTN+GAYVNVGAE PGFLLLKEIPGRP+G+ AP VLR+NKRLRVYA+EVD E LRIKLTCKRPRS PRCG +A ALASDA +EEF+YDDT R + DG + E ++ +E+ +DDXXXXXXX +E WF+PERG+VIP
Sbjct: 37 LLATDASEGGLLGDEAEGEXXXXXEEGVERGRGRKPRVWYDSYKARMKAEKAKEAAWQEKRKTFSKAHNDYLDEAQRNREIAAARREKYTKKFYRDKKIYDIVKERGRKAVREATWATRWPRQVTRKLEDLQEGEWIKGKVRNVE--SYGAWVDVNAERDGLLHVKDMGETFTPSAGEVVATKDIIQARVKFVDPVTGKLGLSLVEDGPREGDLPLPPPRPPISVADVSRGAELWGYVERVTNMGAYVNVGAEVPGFLLLKEIPGRPRGLGAPQVLRRNKRLRVYAREVDREGLRIKLTCKRPRSLPRCGPAAAALASDADAEEFDYDDTARVRYSEDDGWDRDDEYEXXXXXXXXXMEVEDGMDEFGDDDXXXXXXXGEE--WFYPERGQVIP 426
BLAST of mRNA_F-serratus_M_contig692.18022.1 vs. uniprot
Match: A0A835YZW7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZW7_9STRA) HSP 1 Score: 177 bits (450), Expect = 1.890e-47 Identity = 108/248 (43.55%), Postives = 144/248 (58.06%), Query Frame = 1
Query: 799 HIEYLEQAQRNRDMAAARREKYTKKFFRQKKLHDIIKDRGQRAVREATRATRWPRKIKRSLEELEVGEWLEGKVRNVERQAYGAWVDVNAERDGLLHVRDMSQIFTPSAEQMVATRDSLRVRVKFVDPGAGKLGLSLVEERSHEDDLPNAPPRPKISVADVAPGAELWGYVERVTNLGAYVNVGAERPGFLLLKEIPGRPKGVDAPNVLRKNKRLRVYAKEVDPERLRIKLTCKRPRSRPRCGSAPAL 1542
H +YL + + N+ AAARR +KKF+R+K ++D I+D+ + +EA ATRW R + L LE G WL GKVRN+E ++GAWVDV AERDGLLHV DMS+ FTP T D + V VK VD G +L LS V S E++ + K + ++ G E+WG + +VTN G +V G E GFL + + P G V + +R+R Y KEVD E R+KLT RP PR G A L
Sbjct: 52 HKQYLAEVEENKKRAAARRLANSKKFWRKKVVYDFIRDKTREQSKEAAAATRWERNVTHPLASLERGVWLTGKVRNLE--SFGAWVDVGAERDGLLHVSDMSEGFTPRVADAFNTGDIISVTVKHVDAGTNRLALSAVAV-SLEEEAEESYEALKTPLGEMEEGDEVWGEITKVTNFGVFVEAGVEVAGFLHVSDWPAAA-GRRPSEVFSRRQRVRTYVKEVDTEASRLKLTGVRPSYLPRIGGAQLL 295
BLAST of mRNA_F-serratus_M_contig692.18022.1 vs. uniprot
Match: A0A7S2V5P7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5P7_9STRA) HSP 1 Score: 117 bits (292), Expect = 3.210e-25 Identity = 72/191 (37.70%), Postives = 114/191 (59.69%), Query Frame = 1
Query: 961 RKIKRSLEELEVGEWLEGKVRNVERQAYGAWVDVNAERDGLLHVRDM-SQIFTPSAEQMVATRDSLRVRVKFVDPGAGKLGLSLVEERSHEDDLPNAPPR--------PKISVADVAPGAELWGYVERVTNLGAYVNVGAERPGFLLLKEIPGRPKGVDAPNVLRKNKRLRVYAKEVDPERLRIKLTCKRP 1506
R + + L EL+ G+ L G VRNVE+ +GA+V V AE+DGLLH++DM S + A+++ + D + V+VKFVD LGL++ E + +P P + S+ ++ ++WG VERVT+ GA+V++GAE FL + + P R K A + +RLR+Y KEV+ ++ R+K+T +RP
Sbjct: 134 RVVSKPLSELQAGDRLNGTVRNVEK--FGAFVHVGAEKDGLLHIKDMCSAQWVSRADEVFKSGDEVSVQVKFVDAEKRLLGLTMKE--LDDQGMPMIPEEVASALANLDRQSLKNLEEDDQVWGVVERVTSFGAFVDIGAEVQAFLHILDYPRRVKAASATKSFHRGQRLRLYVKEVELDKNRVKVTAERP 320
BLAST of mRNA_F-serratus_M_contig692.18022.1 vs. uniprot
Match: A0A7S2EYN2_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EYN2_TRICV) HSP 1 Score: 109 bits (272), Expect = 2.350e-22 Identity = 74/185 (40.00%), Postives = 108/185 (58.38%), Query Frame = 1
Query: 979 LEELEVGEWLEGKVRNVERQAYGAWVDVNAERDGLLHVRDMSQ-IFTPSAEQMVATRDSLRVRVKFVDPGAGKLGLSLVEERS--HEDDLPNAPPRPKISVADVAPGAELWGYVERVTNLGAYVNVGAERPGFLLLKEIP--GRPKGVDAPNVLRKNKRLRVYAKEVDPERLRIKLTCKRPRSRP 1518
L +L VG+ +EG V ++ YGA+VDV +ERDGLLHV +++ +F Q+++ D + VRV V P KL LS++ + DD+ +A P I ++D+ ELWG +ERVT+ GAYV +GAE GFL + P G G +R R+RV+A +VD E+ R++LT RP P
Sbjct: 170 LSDLTVGQEVEGTVISLVN--YGAYVDVGSERDGLLHVGQITRDLFVEHPRQVLSPGDVVTVRVARVSPELKKLQLSMLPLPAPLDPDDVSDADP---IPLSDIDVNDELWGQIERVTDYGAYVELGAEVEGFLHFMDHPEFGLTPGATPDTYMRPGDRVRVWAADVDEEKGRVRLTANRPEGLP 349
BLAST of mRNA_F-serratus_M_contig692.18022.1 vs. uniprot
Match: W7TP35_9STRA (30s ribosomal protein s1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TP35_9STRA) HSP 1 Score: 105 bits (262), Expect = 1.430e-20 Identity = 88/255 (34.51%), Postives = 134/255 (52.55%), Query Frame = 1
Query: 793 KHHIEYLEQAQRNRDMAAA-------RREKYTKKFFRQKKLHDIIKDRGQRAVREATRATRWPRKIKRS----LEELEVGEWLEGKVRNVERQAYGAWVDVNAERDGLLHVRDMS-QIFTPSAEQMVATRDSLRVRVKFVDPGAGKLGLSLVEERSHEDDLPNAPPRPKISVADVAPGAELWGYVERVTNLGAYVNVGAERPGFLLLKEIPGRPKGVDAPNVLRKNKRLRVYAKEVDPERLRIKLTCKRPRSRPR 1521
K H ++L++ +N+ A A +R++Y ++ + KL I K+R + + W ++ KR L ELE+G EG V V+ +GA+VD A +DG + +RD+S + F A V D++ VK++ P G + SLV + A + + +V ELWG V +V+N GA+V+VGAE GFL + P R +G +V RLRV+A EVD +R R+KLT +RPRS PR
Sbjct: 108 KKHFDFLKEVGKNKKQARANKARFRDQRDEYLEEMRKAFKLMQI-KERQESGFK-------WVKRPKRERQIPLGELELGSRHEGVVITVKE--HGAYVDFGATKDGFVRLRDLSDRDFVLDARDYVRPGDAVSFFVKYLSPAEGIVTGSLVPAEVETAEEQEA----RTGLEEVEEDDELWGEVTKVSNYGAFVDVGAEVQGFLHVIYYPRRSEGALTQDVFFPGMRLRVWAMEVDRDRRRLKLTGERPRSLPR 348
BLAST of mRNA_F-serratus_M_contig692.18022.1 vs. uniprot
Match: A0A2V3IXI7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXI7_9FLOR) HSP 1 Score: 100 bits (249), Expect = 4.400e-19 Identity = 66/175 (37.71%), Postives = 102/175 (58.29%), Query Frame = 1
Query: 970 KRSLEELEVGEWLEGKVRNVERQAYGAWVDVNAERDGLLHVRDMSQIFTPSAEQMVATRDSLRVRVKFVDPGAGKLGLSLVEERSHEDDLPNAPPRPKISVADVAPGAELWGYVERVTNLGAYVNVGAERPGFLLLKEIPGR-PKGVDAPNVLRKNKRLRVYAKEVDPERLRIKL 1491
KR ++ +GE L G VRN +GA+VDV AE+DGL+HVRDM+ F + +V + D++ V VKFV+ LGL++V+ P+ +I + D+ G G +ER+TN GAYV++GAER FL + + G P+ + + LR +++ V+ EVD +R I+L
Sbjct: 124 KRPFSDIRLGERLFGVVRNT--VPHGAYVDVGAEKDGLVHVRDMAVDFVHTPTDIVRSGDTVTVWVKFVNASKRVLGLTMVK--------PHLGFESRIKMKDIVEGGRYQGVIERITNYGAYVDIGAERQAFLHVAALWGALPR--ETLDFLRLGQKIWVHVAEVDTQRNHIRL 286
BLAST of mRNA_F-serratus_M_contig692.18022.1 vs. uniprot
Match: A0A7S2Q562_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q562_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 9.920e-19 Identity = 68/194 (35.05%), Postives = 107/194 (55.15%), Query Frame = 1
Query: 964 KIKRSLEELEVGEWLEGKVRNVERQAYGAWVDVNAERDGLLHVRDMSQI-FTPSAEQMVATRDSLRVRVKFVDPGAGKLGLSLV-EERSHEDDLPNA-----PPRPKISVADVAPGAELWGYVERVTNLGAYVNVGAERPGFLLLKEIP--GRPKGVDAPNVLRKNKRLRVYAKEVDPERLRIKLTCKRPRSRP 1518
K + L +L GE + G+V + ++GA+VD+ +E DGLLHV +S+ F + +A D + VR+ +DPGA KL L+++ EE +E+++ N +I + ++ ELWG + RVT+ GAY+ +GA GF+ + P G KG +R R+RV+ +VD + RIKLT RP P
Sbjct: 150 KTRTKLADLNPGETVPGRV--ISLTSFGAYVDIGSEVDGLLHVSQISRDEFVDHPRKFLAPGDDVEVRIVRMDPGAKKLQLTMLPEEVLNEENVLNKHMIDEDEDDRIQLDEIEVDDELWGEIRRVTDYGAYIELGAVVRGFMHFMDHPLFGEVKGAHPKEFMRVGDRVRVWVLDVDSTQQRIKLTANRPSGLP 341
BLAST of mRNA_F-serratus_M_contig692.18022.1 vs. uniprot
Match: A0A1X6P2E1_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P2E1_PORUM) HSP 1 Score: 98.6 bits (244), Expect = 1.270e-18 Identity = 77/199 (38.69%), Postives = 108/199 (54.27%), Query Frame = 1
Query: 970 KRSLEELEVGEWLEGKVRNVERQAYGAWVDVNAERDGLLHVRDMSQIFTPSAEQMVATRDSLRVRVKFVDPGAGKLGLSLVEER-SHEDDLPNAPPRPKISVADVAPGAELWGYVERVTNLGAYVNVGAERPGFLLLKEIPGRPKGVDAPNVLRKNKRLRVYAKEVDPERLRIKLTCKRPRSRPRCGSAPALASDAFSE 1563
+RSL+ L G+ L+G V N+ + +GA+VDV A DGL+H+RDMS F E ++A D++ V VK+ + G+L LSL+ R S LP A R + + DVA G+ + G V RV+N GAYV+VGA GF+ + + GR + LR + L V VD R IKL R R R L + A S+
Sbjct: 114 RRSLDALVAGQRLDGTVTNLVK--HGAYVDVGATTDGLVHLRDMSVEFVHEPEDILAPGDTVEVYVKYAEEVTGRLALSLLRPRPSVATPLPQAA-RGRTRLVDVAVGSRVLGTVRRVSNFGAYVDVGAAMDGFVHVSLLYGR-RPRRTLEELRLGQELWVVVDAVDVARSAIKL---RARGRSSYNREQPLTATALSD 305
BLAST of mRNA_F-serratus_M_contig692.18022.1 vs. uniprot
Match: A0A1Z5JSD4_FISSO (Small subunit ribosomal protein S1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSD4_FISSO) HSP 1 Score: 94.7 bits (234), Expect = 1.280e-17 Identity = 55/158 (34.81%), Postives = 90/158 (56.96%), Query Frame = 1
Query: 1042 YGAWVDVNAERDGLLHVRDMSQ-IFTPSAEQMVATRDSLRVRVKFVDPGAGKLGLSLVEERSHEDDLPNAPPRPKISVADVAPGAELWGYVERVTNLGAYVNVGAERPGFLLLKEIP--GRPKGVDAPNVLRKNKRLRVYAKEVDPERLRIKLTCKRP 1506
+GA++D+ E DGLLHV +S+ +F +Q++ D + VRV+ + P KL LS++ E ++ + + +I + D+ ELWG +R+T+ GAYV VGAE FL + P G KG ++ R+R++ ++D E+ RIK+T RP
Sbjct: 152 FGAYIDIGTECDGLLHVSQISRDVFVEHPKQILTPGDEVTVRVRSISPEKKKLHLSMLPEDILREETSDDFAKNRIPLVDIQVDDELWGEFKRITDFGAYVEVGAEVDAFLHFMDHPAFGWSKGSHPSEFMKVGDRVRIWVSDLDFEQRRIKVTANRP 309 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig692.18022.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig692.18022.1 >prot_F-serratus_M_contig692.18022.1 ID=prot_F-serratus_M_contig692.18022.1|Name=mRNA_F-serratus_M_contig692.18022.1|organism=Fucus serratus male|type=polypeptide|length=572bp MGRYPPFALYAASCAASCSGGYSGGGFHDSLATGFVTSPRPSTSWKTSTYback to top mRNA from alignment at F-serratus_M_contig692:309493..318635+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig692.18022.1 ID=mRNA_F-serratus_M_contig692.18022.1|Name=mRNA_F-serratus_M_contig692.18022.1|organism=Fucus serratus male|type=mRNA|length=9143bp|location=Sequence derived from alignment at F-serratus_M_contig692:309493..318635+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig692:309493..318635+ >mRNA_F-serratus_M_contig692.18022.1 ID=mRNA_F-serratus_M_contig692.18022.1|Name=mRNA_F-serratus_M_contig692.18022.1|organism=Fucus serratus male|type=CDS|length=3432bp|location=Sequence derived from alignment at F-serratus_M_contig692:309493..318635+ (Fucus serratus male)back to top |