mRNA_F-serratus_M_contig1238.1801.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1238.1801.1 vs. uniprot
Match: D7FW94_ECTSI (Disproportionate superoxide radical into hydrogen peroxide n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW94_ECTSI) HSP 1 Score: 289 bits (739), Expect = 2.800e-96 Identity = 143/156 (91.67%), Postives = 151/156 (96.79%), Query Frame = 1
Query: 1 MAKASCVMTSDEEGLTGSLMLAQAQEEAPTIISGEISGLRPGRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIEADDTGTCKIHLEDRLVRLIGPHSIIGRSILVTAGEDDLGRGGHELSLTTGNAGARVCGGVVGIAASK 468
MAKASCVMTSDEEGLTGSLML+QAQEEAPTIISGEI+G+RPGRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNI+ADD G CK+HLEDR+VRLIGPHSIIGRSI++TAGEDDLGRGGHEL TTGNAGARV GGVVGIAASK
Sbjct: 1 MAKASCVMTSDEEGLTGSLMLSQAQEEAPTIISGEIAGMRPGRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIDADDAGVCKVHLEDRMVRLIGPHSIIGRSIIITAGEDDLGRGGHELFFTTGNAGARVWGGVVGIAASK 156
BLAST of mRNA_F-serratus_M_contig1238.1801.1 vs. uniprot
Match: A0A835Z8H2_9STRA (Disproportionate superoxide radical into hydrogen peroxide n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8H2_9STRA) HSP 1 Score: 239 bits (611), Expect = 7.430e-77 Identity = 118/156 (75.64%), Postives = 134/156 (85.90%), Query Frame = 1
Query: 1 MAKASCVMTSDEEGLTGSLMLAQAQEEAPTIISGEISGLRPGRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIEADDTGTCKIHLEDRLVRLIGPHSIIGRSILVTAGEDDLGRGGHELSLTTGNAGARVCGGVVGIAASK 468
MAKASC EEG+ G L +QAQE+A TII G+ISGLRPGRHG+ VH+FGDFSEGL SAGGIFNPF KNHGAPDDE+RMVGDLGN+EAD+ G CKI +ED LV+LIGPHS+IGRSI+V A EDDLGRGGHELSL+TGN+GARV GGV+GIA SK
Sbjct: 1 MAKASCTFAG-EEGVKGLLTFSQAQEDASTIIEGQISGLRPGRHGLHVHIFGDFSEGLTSAGGIFNPFGKNHGAPDDEERMVGDLGNVEADEEGVCKIAIEDSLVKLIGPHSVIGRSIIVKANEDDLGRGGHELSLSTGNSGARVAGGVIGIAPSK 155
BLAST of mRNA_F-serratus_M_contig1238.1801.1 vs. uniprot
Match: A0A2Z5VKR9_CHAMQ (Cu Zn superoxide dismutase n=1 Tax=Chattonella marina var. antiqua TaxID=859642 RepID=A0A2Z5VKR9_CHAMQ) HSP 1 Score: 239 bits (610), Expect = 1.050e-76 Identity = 116/156 (74.36%), Postives = 138/156 (88.46%), Query Frame = 1
Query: 1 MAKASCVMTSDEEGLTGSLMLAQAQEEAPTIISGEISGLRPGRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIEADDTGTCKIHLEDRLVRLIGPHSIIGRSILVTAGEDDLGRGGHELSLTTGNAGARVCGGVVGIAASK 468
MA++ CVMT E+G++G L+L+QAQE+A TII G +SGL PG+HGI +HVFGDFS+GL SAGGIFNPF KNHGAPDDE+RMVGDLGNIE D+ G +IH+EDRLV+LIGPHSIIGRSI++T+GEDDLGRGGHELSLT GN+G RV GGVVGIA+SK
Sbjct: 1 MARSMCVMTG-EDGVSGHLVLSQAQEDAATIIDGVVSGLTPGKHGIHIHVFGDFSQGLTSAGGIFNPFGKNHGAPDDEERMVGDLGNIEVDEEGQAQIHIEDRLVKLIGPHSIIGRSIIITSGEDDLGRGGHELSLTNGNSGPRVAGGVVGIASSK 155
BLAST of mRNA_F-serratus_M_contig1238.1801.1 vs. uniprot
Match: A0A7S2UTD5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTD5_9STRA) HSP 1 Score: 228 bits (581), Expect = 2.630e-72 Identity = 108/156 (69.23%), Postives = 133/156 (85.26%), Query Frame = 1
Query: 1 MAKASCVMTSDEEGLTGSLMLAQAQEEAPTIISGEISGLRPGRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIEADDTGTCKIHLEDRLVRLIGPHSIIGRSILVTAGEDDLGRGGHELSLTTGNAGARVCGGVVGIAASK 468
MA++ CV+ E+G++G L+L+QAQE+APTII GEI GL PGRHG VHVFGDFS+G +SAGGIFNPF KNHGAPDDE+RM GDLGNIE +D G + +EDR+++LIGPHS+IGR I++T+GEDDLGRGGHELSLT GN+G RV GGV+GIA+SK
Sbjct: 1 MARSMCVIAG-EDGVSGYLVLSQAQEDAPTIIEGEIRGLTPGRHGFHVHVFGDFSQGFISAGGIFNPFGKNHGAPDDEERMAGDLGNIEVNDEGVAMVRMEDRVLKLIGPHSVIGRCIVITSGEDDLGRGGHELSLTNGNSGPRVAGGVIGIASSK 155
BLAST of mRNA_F-serratus_M_contig1238.1801.1 vs. uniprot
Match: D7FM93_ECTSI (Copper/zinc superoxide dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM93_ECTSI) HSP 1 Score: 225 bits (574), Expect = 8.340e-72 Identity = 108/115 (93.91%), Postives = 113/115 (98.26%), Query Frame = 1
Query: 124 GRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIEADDTGTCKIHLEDRLVRLIGPHSIIGRSILVTAGEDDLGRGGHELSLTTGNAGARVCGGVVGIAASK 468
GRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNI+ADD G CK+HLEDR+VRLIGPHSIIGRSI++TAGEDDLGRGGHELSLTTGNAGARVCGGVVGIAASK
Sbjct: 2 GRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIDADDAGVCKVHLEDRMVRLIGPHSIIGRSIIITAGEDDLGRGGHELSLTTGNAGARVCGGVVGIAASK 116
BLAST of mRNA_F-serratus_M_contig1238.1801.1 vs. uniprot
Match: A0A7S3JNV1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JNV1_9STRA) HSP 1 Score: 221 bits (564), Expect = 9.270e-70 Identity = 111/155 (71.61%), Postives = 128/155 (82.58%), Query Frame = 1
Query: 1 MAKASCVMTSDEEGLTGSLMLAQAQEEAPTIISGEISGLRPGRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIEADDTGTCKIHLEDRLVRLIGPHSIIGRSILVTAGEDDLGRGGHELSLTTGNAGARVCGGVVGIAAS 465
MA+ SCV+T EG++G L L+Q EE+ T I G I+GL PG HGI VH+FGDFS+GL SAGGIFNPF+KNHGAPD +DRMVGDLGNIE + G+C IH+ED LV+LIGPHSIIGRSI++ AGEDDLGRGGHELSLTTGN G RV GGVVGIA S
Sbjct: 1 MARCSCVLTG--EGVSGVLTLSQPSEESATRIDGTINGLTPGLHGIHVHIFGDFSQGLTSAGGIFNPFAKNHGAPDADDRMVGDLGNIEVAEDGSCTIHIEDSLVKLIGPHSIIGRSIIIFAGEDDLGRGGHELSLTTGNPGPRVAGGVVGIAPS 153
BLAST of mRNA_F-serratus_M_contig1238.1801.1 vs. uniprot
Match: A0A8J2SRW2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SRW2_9STRA) HSP 1 Score: 216 bits (551), Expect = 8.640e-68 Identity = 104/155 (67.10%), Postives = 126/155 (81.29%), Query Frame = 1
Query: 1 MAKASCVMTSDEEGLTGSLMLAQAQEEAPTIISGEISGLRPGRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIEADDTGTCKIHLEDRLVRLIGPHSIIGRSILVTAGEDDLGRGGHELSLTTGNAGARVCGGVVGIAAS 465
MA+ SCV+T G+TG+L+L+Q E PT+I G ISGL PG HGI VH+FGDFS+GL SAGGIFNPF++NHG P+DE+RM GDLGN+E + G+C +H+EDR V+LIGPHSIIGRSI+V GEDD G+GGHELSL+TGN G RV GGVVGIA S
Sbjct: 1 MARCSCVLTGT--GVTGTLVLSQPSESQPTVIDGSISGLAPGLHGIHVHIFGDFSQGLTSAGGIFNPFARNHGGPNDEERMAGDLGNLEVAEDGSCSVHIEDRHVKLIGPHSIIGRSIVVFGGEDDFGKGGHELSLSTGNPGPRVAGGVVGIAPS 153
BLAST of mRNA_F-serratus_M_contig1238.1801.1 vs. uniprot
Match: A0A7S2WW13_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW13_9STRA) HSP 1 Score: 214 bits (544), Expect = 2.110e-66 Identity = 102/155 (65.81%), Postives = 122/155 (78.71%), Query Frame = 1
Query: 1 MAKASCVMTSDEEGLTGSLMLAQAQEEAPTIISGEISGLRPGRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIEADDTGTCKIHLEDRLVRLIGPHSIIGRSILVTAGEDDLGRGGHELSLTTGNAGARVCGGVVGIAAS 465
MA++ C++ EG+ G L QAQE+APT I G I GL PG H I +H FGDF++GL SAGGIFNPF KNHGAPDDE+RMVGDLGNIE D G C +H+EDRLV+LIGPHS+IGRS+L+ GEDDLGRG H+LSL GN+G R+ GGVVGIA+S
Sbjct: 24 MARSMCILIG--EGIRGELSFDQAQEDAPTRIDGTIEGLTPGTHAIHIHTFGDFAQGLTSAGGIFNPFGKNHGAPDDEERMVGDLGNIEVDAAGRCTVHIEDRLVKLIGPHSVIGRSVLIKQGEDDLGRGQHDLSLVNGNSGQRIAGGVVGIASS 176
BLAST of mRNA_F-serratus_M_contig1238.1801.1 vs. uniprot
Match: A0A7S2MFL1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MFL1_9STRA) HSP 1 Score: 206 bits (525), Expect = 1.100e-63 Identity = 97/153 (63.40%), Postives = 121/153 (79.08%), Query Frame = 1
Query: 1 MAKASCVMTSDEEGLTGSLMLAQAQEEAPTIISGEISGLRPGRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIEADDTGTCKIHLEDRLVRLIGPHSIIGRSILVTAGEDDLGRGGHELSLTTGNAGARVCGGVVGIA 459
MAK +C + + ++GSL L+Q E+APTII GEI GL PG+H I VHV+GD ++G S G IFNPF KNHGAP+DE+RMVGDLGN+ D G +H+ED++V+LIGPHS+IGRSI+V AGEDD GRGGHELSLTTGN+GARV GV+GI+
Sbjct: 12 MAKCTCTLNGEGGSVSGSLRLSQLSEDAPTIIQGEIKGLSPGKHAISVHVYGDLTDGATSGGAIFNPFGKNHGAPEDEERMVGDLGNVITTDDGKTAVHIEDKVVKLIGPHSVIGRSIVVHAGEDDCGRGGHELSLTTGNSGARVAAGVIGIS 164
BLAST of mRNA_F-serratus_M_contig1238.1801.1 vs. uniprot
Match: A0A7S2HLY5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HLY5_9STRA) HSP 1 Score: 202 bits (514), Expect = 2.320e-62 Identity = 97/139 (69.78%), Postives = 112/139 (80.58%), Query Frame = 1
Query: 49 GSLMLAQAQEEAPTIISGEISGLRPGRHGIRVHVFGDFSEGLVSAGGIFNPFSKNHGAPDDEDRMVGDLGNIEADDTGTCKIHLEDRLVRLIGPHSIIGRSILVTAGEDDLGRGGHELSLTTGNAGARVCGGVVGIAAS 465
G+ +L QA E+ PT I G+I GL PG HG+ +H FGDFS+GLVSAGGIFNPF KNHGAPDDE+RMVGDLGNIE D G C + LEDRLV+LIGPHS+IGRSI+V GEDD GRGGHELSL +GN+G R+ GG VGI S
Sbjct: 3 GTFVLEQAAEDQPTRIEGKIEGLTPGLHGLHMHTFGDFSQGLVSAGGIFNPFGKNHGAPDDEERMVGDLGNIEVDAQGKCTVMLEDRLVKLIGPHSVIGRSIIVKQGEDDFGRGGHELSLVSGNSGQRLAGGFVGICQS 141 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1238.1801.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1238.1801.1 >prot_F-serratus_M_contig1238.1801.1 ID=prot_F-serratus_M_contig1238.1801.1|Name=mRNA_F-serratus_M_contig1238.1801.1|organism=Fucus serratus male|type=polypeptide|length=157bp MAKASCVMTSDEEGLTGSLMLAQAQEEAPTIISGEISGLRPGRHGIRVHVback to top mRNA from alignment at F-serratus_M_contig1238:197882..204065- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1238.1801.1 ID=mRNA_F-serratus_M_contig1238.1801.1|Name=mRNA_F-serratus_M_contig1238.1801.1|organism=Fucus serratus male|type=mRNA|length=6184bp|location=Sequence derived from alignment at F-serratus_M_contig1238:197882..204065- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1238:197882..204065- >mRNA_F-serratus_M_contig1238.1801.1 ID=mRNA_F-serratus_M_contig1238.1801.1|Name=mRNA_F-serratus_M_contig1238.1801.1|organism=Fucus serratus male|type=CDS|length=942bp|location=Sequence derived from alignment at F-serratus_M_contig1238:197882..204065- (Fucus serratus male)back to top |