prot_F-serratus_M_contig691.18010.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig691.18010.1
Unique Nameprot_F-serratus_M_contig691.18010.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length397
Homology
BLAST of mRNA_F-serratus_M_contig691.18010.1 vs. uniprot
Match: D8LH45_ECTSI (Splicing factor YJU2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH45_ECTSI)

HSP 1 Score: 293 bits (750), Expect = 1.800e-92
Identity = 156/210 (74.29%), Postives = 174/210 (82.86%), Query Frame = 0
Query:    1 MKRDPEKQICVRMMIPFSLQCNTCGEFMYRGKKFNSWKEDCIGEDYLGIRKYRFYIKCVICSQEITFKTDPEKGDYELETGASRNFESWADKQATEEEHKKAREXXEKSDNMKQLENRTLDSKIELEIMDALDEIKAVNRRHENIDTAEVLRASAARREKGFDGXXXXXXXXXXXSAEGTYDEDEALIASIKFGGPRFRRLSEDGDSDDT 210
            +KRDPEKQI VRMMIPFS+QCNTCGEFMYRGKKFNS KEDCIGEDYL IR++RFYIKCVICSQEITFKTDPEKGDYELETGASRNFESW DKQATE+EHK+ARE  EKSDNMKQLENRTLDSKIELEIMDALDEIKAVNRRHE ++T +VL+ASAARR K               +  G   E +A+IA+I+FGG + RRL  D D D++
Sbjct:   23 LKRDPEKQIGVRMMIPFSMQCNTCGEFMYRGKKFNSLKEDCIGEDYLTIRRFRFYIKCVICSQEITFKTDPEKGDYELETGASRNFESWTDKQATEKEHKEAREEEEKSDNMKQLENRTLDSKIELEIMDALDEIKAVNRRHETVNTEDVLKASAARRNKSV--------GDKGGAGAGENAEVDAMIANIQFGGSKVRRLV-DADEDNS 223          
BLAST of mRNA_F-serratus_M_contig691.18010.1 vs. uniprot
Match: A0A835Z1Z4_9STRA (Splicing factor YJU2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Z4_9STRA)

HSP 1 Score: 208 bits (529), Expect = 2.360e-60
Identity = 127/217 (58.53%), Postives = 153/217 (70.51%), Query Frame = 0
Query:    1 MKRDPEKQICVRMMIPFSLQCNTCGEFMYRGKKFNSWKEDCIGEDYLGIRKYRFYIKCVICSQEITFKTDPEKGDYELETGASRNFESWADKQATEEEHKKAREXXEKSDNMKQLENRTLDSKIELEIMDALDEIKAVNRRHENIDTAEVLRASAARREKGFDGXXXXXXXXXXXSAEGTYDEDEALIASIKFGG-----PRFRRLSE-DGDSDDTG 211
            M+R    Q+ VRMM+PF++QC  C EFMYRGKKFNS KEDC GEDY GIRK+RFYIKC+ C+QEITFKTDPE  DYELE GA+RNFESW + +A E +   AR   +K+D MK LENRTLDSKIE++I+DALDEI+AVN+RHE +DTA +L + A  +       XXXXXXXXXX          ALI SIKFG         RRLS+ +G  D+ G
Sbjct:   23 MRRGKNHQVEVRMMLPFTIQCTVCSEFMYRGKKFNSKKEDCEGEDYKGIRKFRFYIKCITCNQEITFKTDPEHADYELEVGATRNFESWRETEAAETKAVAARAAEDKNDPMKALENRTLDSKIEMDILDALDEIRAVNKRHERVDTAAILESRARSQXXXX---XXXXXXXXXXXXXXXXXXXXALIKSIKFGARTAGAAAVRRLSDSEGSGDEVG 236          
BLAST of mRNA_F-serratus_M_contig691.18010.1 vs. uniprot
Match: A0A2D4C0T0_PYTIN (Splicing factor YJU2 n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C0T0_PYTIN)

HSP 1 Score: 197 bits (500), Expect = 9.860e-57
Identity = 101/154 (65.58%), Postives = 119/154 (77.27%), Query Frame = 0
Query:    2 KRDPEKQICVRMMIPFSLQCNTCGEFMYRGKKFNSWKEDCIGEDYLGIRKYRFYIKCVICSQEITFKTDPEKGDYELETGASRNFESWADKQATEEEHKKAREXXEKSDNMKQLENRTLDSKIELEIMDALDEIKAVNRRHENIDTAEVLRASA 155
            KR   +QI VRMM+PFS+QC TCGE+MYRGKKFNS KED + E+YLGIR +RFYIKCV CS EITFKTDP+ GDY  E G  RNFE W +K+A EE   K RE  EK D MK LENRTLDSK E++I+DALDEIKA+N+RH  IDT ++L+  A
Sbjct:   24 KRPKNQQIEVRMMLPFSIQCATCGEYMYRGKKFNSRKEDVVEENYLGIRIFRFYIKCVTCSSEITFKTDPKNGDYVAEHGCQRNFEPWREKEAAEEAAMKQREDEEKGDAMKALENRTLDSKREMDILDALDEIKAINQRHAKIDTDQLLQQHA 177          
BLAST of mRNA_F-serratus_M_contig691.18010.1 vs. uniprot
Match: A0A6G0XWY7_9STRA (Splicing factor YJU2 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWY7_9STRA)

HSP 1 Score: 194 bits (492), Expect = 1.040e-55
Identity = 97/145 (66.90%), Postives = 115/145 (79.31%), Query Frame = 0
Query:    7 KQICVRMMIPFSLQCNTCGEFMYRGKKFNSWKEDCIGEDYLGIRKYRFYIKCVICSQEITFKTDPEKGDYELETGASRNFESWADKQATEEEHKKAREXXEKSDNMKQLENRTLDSKIELEIMDALDEIKAVNRRHENIDTAEVL 151
            KQI VRMM+PFS+QCN CGEFMY+GKKFNS KED + EDY GIR YRFYI+C +CS EITFKTDP+ GDY  E G  RNFE W ++ A E+E  KARE  EK D+MK LENRTLDSK E++I+DALDEIKA+N+RH  +DT  +L
Sbjct:   29 KQIEVRMMLPFSIQCNACGEFMYQGKKFNSRKEDVLDEDYFGIRIYRFYIRCSMCSNEITFKTDPKNGDYATEHGCKRNFEPWRERAADEKEAVKAREEEEKGDSMKALENRTLDSKREMDIIDALDEIKAINQRHAKVDTDALL 173          
BLAST of mRNA_F-serratus_M_contig691.18010.1 vs. uniprot
Match: A0A8K1C367_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C367_PYTOL)

HSP 1 Score: 193 bits (491), Expect = 2.270e-55
Identity = 100/154 (64.94%), Postives = 116/154 (75.32%), Query Frame = 0
Query:    2 KRDPEKQICVRMMIPFSLQCNTCGEFMYRGKKFNSWKEDCIGEDYLGIRKYRFYIKCVICSQEITFKTDPEKGDYELETGASRNFESWADKQATEEEHKKAREXXEKSDNMKQLENRTLDSKIELEIMDALDEIKAVNRRHENIDTAEVLRASA 155
            KR   +QI VRMM+PFS+QC TCGE+MYRGKKFNS KED + EDY GIR +RFYIKCV CS EITFKTDP+ GDY  E G  RNFE W +K A EE   K +E  EK D MK LENRTLDSK E++I+DALDEIKA+N+RH  IDT  +L+  A
Sbjct:   24 KRPKNQQIEVRMMLPFSIQCATCGEYMYRGKKFNSRKEDVVEEDYFGIRIFRFYIKCVTCSSEITFKTDPKNGDYVAEHGCQRNFEPWREKDAEEEAALKQKEDEEKGDAMKVLENRTLDSKREMDILDALDEIKAINQRHSKIDTDALLQQHA 177          
BLAST of mRNA_F-serratus_M_contig691.18010.1 vs. uniprot
Match: A0A1W0A1I0_9STRA (Splicing factor YJU2 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A1I0_9STRA)

HSP 1 Score: 191 bits (484), Expect = 1.240e-54
Identity = 95/150 (63.33%), Postives = 117/150 (78.00%), Query Frame = 0
Query:    2 KRDPEKQICVRMMIPFSLQCNTCGEFMYRGKKFNSWKEDCIGEDYLGIRKYRFYIKCVICSQEITFKTDPEKGDYELETGASRNFESWADKQATEEEHKKAREXXEKSDNMKQLENRTLDSKIELEIMDALDEIKAVNRRHENIDTAEVL 151
            K+   KQI VRMM+PFS+QC TCGE+MYRGKKFNS KED + EDY GI+ +RFYI+CV C+ EITFKTDP+ GDY  E G  RNFE W + +A +E+  K RE  EK D+MKQLENRTLDSK E++I+DALDEIKA+N+RH  +DT  +L
Sbjct:   24 KQPKNKQIEVRMMLPFSIQCATCGEYMYRGKKFNSRKEDVLEEDYHGIKIFRFYIRCVTCASEITFKTDPQHGDYVAEHGCQRNFEPWRENEANDEKMLKEREEEEKGDSMKQLENRTLDSKREMDILDALDEIKAINQRHAKVDTDALL 173          
BLAST of mRNA_F-serratus_M_contig691.18010.1 vs. uniprot
Match: A0A024UUI7_9STRA (Splicing factor YJU2 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UUI7_9STRA)

HSP 1 Score: 189 bits (481), Expect = 4.910e-54
Identity = 93/145 (64.14%), Postives = 114/145 (78.62%), Query Frame = 0
Query:    7 KQICVRMMIPFSLQCNTCGEFMYRGKKFNSWKEDCIGEDYLGIRKYRFYIKCVICSQEITFKTDPEKGDYELETGASRNFESWADKQATEEEHKKAREXXEKSDNMKQLENRTLDSKIELEIMDALDEIKAVNRRHENIDTAEVL 151
            KQI VRMM+PFS+QCNTCGEFMY+GKKFNS KED + EDY G++ +RFYI+C +CS EITFKTDP+ GDY  E G  RNFE W +++A E    K RE  EK D+MK LENRTLDSK E++I+DALDEIKA+N+RH  +DT  +L
Sbjct:   29 KQIEVRMMLPFSIQCNTCGEFMYQGKKFNSRKEDVLDEDYFGVKIFRFYIRCSMCSSEITFKTDPKNGDYATEHGCKRNFEQWREREADEAAILKEREEEEKGDSMKALENRTLDSKREMDIIDALDEIKAINQRHAKVDTDAIL 173          
BLAST of mRNA_F-serratus_M_contig691.18010.1 vs. uniprot
Match: A0A1V9Y4X5_9STRA (Splicing factor YJU2 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y4X5_9STRA)

HSP 1 Score: 189 bits (479), Expect = 6.870e-54
Identity = 94/150 (62.67%), Postives = 116/150 (77.33%), Query Frame = 0
Query:    2 KRDPEKQICVRMMIPFSLQCNTCGEFMYRGKKFNSWKEDCIGEDYLGIRKYRFYIKCVICSQEITFKTDPEKGDYELETGASRNFESWADKQATEEEHKKAREXXEKSDNMKQLENRTLDSKIELEIMDALDEIKAVNRRHENIDTAEVL 151
            K+    QI VRMM+PFS+QC+TCGE+MYRGKKFNS KED + EDY GI+ +RFYI+C+ C+ EITFKTDP+ GDY  E G  RNFE W +K A EE+  K RE  EK D+MK LENRTLDSK E++I+DALDEIKA+N+RH  +DT  +L
Sbjct:   24 KQPKNMQIEVRMMLPFSIQCSTCGEYMYRGKKFNSRKEDVLEEDYHGIKIFRFYIRCITCASEITFKTDPQHGDYVAEHGCQRNFEPWREKDADEEKMLKEREEEEKGDSMKALENRTLDSKREMDILDALDEIKAINQRHAKVDTDALL 173          
BLAST of mRNA_F-serratus_M_contig691.18010.1 vs. uniprot
Match: A0A7S3ZR03_9STRA (Splicing factor YJU2 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZR03_9STRA)

HSP 1 Score: 189 bits (479), Expect = 7.950e-54
Identity = 94/149 (63.09%), Postives = 117/149 (78.52%), Query Frame = 0
Query:    2 KRDPEKQICVRMMIPFSLQCNTCGEFMYRGKKFNSWKEDCIGEDYLGIRKYRFYIKCVICSQEITFKTDPEKGDYELETGASRNFESWADKQATEEEHKKAREXXEKSDNMKQLENRTLDSKIELEIMDALDEIKAVNRRHENIDTAEV 150
            K DP KQ+ VRMMIPFSLQC  CGE+MYRGKKFNS KED IG+DYLGI+KYRFYIKC +C+ EI FKTDP+  DY  E+GA+RNFESW  +   EE+ +  R+   +++ M  LE++TLDSKIE++I+DALDEIKA N RHE +D AE+
Sbjct:   24 KYDPYKQVEVRMMIPFSLQCIKCGEYMYRGKKFNSRKEDVIGDDYLGIKKYRFYIKCCVCNNEIAFKTDPKNQDYVCESGATRNFESWRQQDEAEEKFEGERKEAAEANAMSALESKTLDSKIEMDILDALDEIKAYNERHERVDRAEL 172          
BLAST of mRNA_F-serratus_M_contig691.18010.1 vs. uniprot
Match: A0A7S2WNJ0_9STRA (Splicing factor YJU2 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WNJ0_9STRA)

HSP 1 Score: 193 bits (491), Expect = 9.670e-54
Identity = 102/194 (52.58%), Postives = 132/194 (68.04%), Query Frame = 0
Query:    1 MKRDPEKQICVRMMIPFSLQCNTCGEFMYRGKKFNSWKEDCIGEDYLGIRKYRFYIKCVICSQEITFKTDPEKGDYELETGASRNFESWADKQATEEEHKKAREXXEKSDNMKQLENRTLDSKIELEIMDALDEIKAVNRRHENIDTAEVLRASAARREKGFDGXXXXXXXXXXXSAEGTYDEDEALIASIKFG 194
            MKRDP     +RMM+PFS+QCNTCGEFMY GKKFNS KE+  GE Y GI+  RFYIKC  C  E++FKTDPE GDY +E+G SR FE W +K A EE + K R   ++ D+M+ LENRTLDS++E++++DALDE+KA+N+RH+ +DT  +L A   RR +   G                 +EDEAL+ SIKFG
Sbjct:   56 MKRDPNFTCEIRMMLPFSVQCNTCGEFMYMGKKFNSRKENAQGEKYKGIQILRFYIKCQTCGAEMSFKTDPENGDYVMESGGSRTFEMWKEKGAMEEANLKERLDEDQQDSMRALENRTLDSRMEMDMLDALDELKAINQRHQRVDTGSLLSAIEERRRQEATGGDLD-------------EEDEALVKSIKFG 236          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig691.18010.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LH45_ECTSI1.800e-9274.29Splicing factor YJU2 n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A835Z1Z4_9STRA2.360e-6058.53Splicing factor YJU2 n=1 Tax=Tribonema minus TaxID... [more]
A0A2D4C0T0_PYTIN9.860e-5765.58Splicing factor YJU2 n=2 Tax=Pythium insidiosum Ta... [more]
A0A6G0XWY7_9STRA1.040e-5566.90Splicing factor YJU2 n=1 Tax=Aphanomyces euteiches... [more]
A0A8K1C367_PYTOL2.270e-5564.94Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1W0A1I0_9STRA1.240e-5463.33Splicing factor YJU2 n=1 Tax=Thraustotheca clavata... [more]
A0A024UUI7_9STRA4.910e-5464.14Splicing factor YJU2 n=1 Tax=Aphanomyces invadans ... [more]
A0A1V9Y4X5_9STRA6.870e-5462.67Splicing factor YJU2 n=1 Tax=Achlya hypogyna TaxID... [more]
A0A7S3ZR03_9STRA7.950e-5463.09Splicing factor YJU2 n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2WNJ0_9STRA9.670e-5452.58Splicing factor YJU2 n=1 Tax=Rhizochromulina marin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 92..118
NoneNo IPR availablePANTHERPTHR12111:SF1COILED-COIL DOMAIN-CONTAINING PROTEIN 94coord: 3..309
IPR007590Saf4/Yju2 proteinPFAMPF04502DUF572coord: 6..391
e-value: 5.3E-65
score: 220.2
IPR007590Saf4/Yju2 proteinPANTHERPTHR12111CELL CYCLE CONTROL PROTEIN CWF16-RELATEDcoord: 3..309

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig691contigF-serratus_M_contig691:252034..302593 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig691.18010.1mRNA_F-serratus_M_contig691.18010.1Fucus serratus malemRNAF-serratus_M_contig691 251301..302781 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig691.18010.1 ID=prot_F-serratus_M_contig691.18010.1|Name=mRNA_F-serratus_M_contig691.18010.1|organism=Fucus serratus male|type=polypeptide|length=397bp
MKRDPEKQICVRMMIPFSLQCNTCGEFMYRGKKFNSWKEDCIGEDYLGIR
KYRFYIKCVICSQEITFKTDPEKGDYELETGASRNFESWADKQATEEEHK
KAREEEEKSDNMKQLENRTLDSKIELEIMDALDEIKAVNRRHENIDTAEV
LRASAARREKGFDGGAAASAAAGGSSAEGTYDEDEALIASIKFGGPRFRR
LSEDGDSDDTGRQALVGDEKEGEEVVSAAAGGASGSVDGDHGHGGVSERS
GREGRQGAALETSTGTDTSVVSRSEAVRAKAAGADGSMGTKIVVKAKKKR
SKAQEGRRAADKSSTLTKRKKGDTTDNANGNGVAIARDKGGPGEPKKSGS
GLGMVTPGASAEAPPAASIPVSSGGAPLGGLNLLGAYGSSSDSDAT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007590Saf4/Yju2