mRNA_F-serratus_M_contig6908.18005.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig6908.18005.1 vs. uniprot
Match: D7G7L6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7L6_ECTSI) HSP 1 Score: 489 bits (1260), Expect = 1.680e-149 Identity = 366/741 (49.39%), Postives = 425/741 (57.35%), Query Frame = 1
Query: 22 VVRVLEEKEEVNPAKQTKEVWVRVQLPRSSSEGGYGGAASAGLIEGWIMAFSTKRGATMAEAPDALAAQVAFQKQEEADQAAATPSAAAGPSPXXXXXXXXXXXXXXXXXXXXXXSTAEVGDYMRAAGTSKLREEADSLSMEIGTVAAGELVRVVETSGLWVRVNYRGASDGWVLTANKRGPILSPAEGSPADAAQEFEDQEAAAGSGSGADVSTANDMGDDDRQLTGAKAGS----TAPSEQIGDVRENARDATPPSXXXXXXXXAAEGP-GKASSAVGGQFLTSAGPLKIREEADPFSMDVGTMDKGDIVKVLEASGMWVRVDYRGRQDGWILTANKRGRSLVPVDDGDLSDAARTFDAQEARYAAEV----------------------------------------------------------AAXXXXXXXXDDDDRPLTGAKPAASAVEA--------EDRALDTGGGGKGSWAPPSEFPPGHEDSPVSEGTTAAARSGVEAETEKENVSGVIGSSGSVRYMRALGPIKIRDEADPFSMDLGVTEKGDLVKVLEASPTDGRWVRVSYRGREDGWILSANKKGPTLDPVEDLAAAAAGFDAQEASFAXXXXXXX-------------------VATEQGGEDRPLNAGGGKDSSWVPPSEFPPGHEESPVE-GGGTAAGTRCLSNADESEGSGKHGDKSNGELASSNGTGHAEYLKALGPLKLRDEADPFSMDLG 1971
+VRV EEKEE+N AKQTK+VWVR Q P +++ G + GL+EGW++AFSTKRG+ +AEAP+ALAAQ AF+KQE XXXXXXXXXXXXXXXXXXX +TA VG YMRAAG KLREEADSLS+E+GTV+ GELVRV +TSGLWVRV YRG S GWVLTANKRG L+PAE PA AA+EF+ QEA N GD+DR LTGAKAGS TA S+ G E AR + XXXXXXXX A G GK ++A GQFLTSAGPLK+REEADPFS+DV TM+KG IVKVLE S MWVRV YRGR DGW+LTANKRG L+P + G + A+R FDAQE +AAE AA PLTGAK +A E EDR L GGGKG+W PPSEFPPGHE S + S + ALG +K+R+EADPFSMDLG KGD+VKVLE S WVRV YRGREDGW+L+ANK+GPTL P ED A+AA FD QEA+FA A EDRPL GGGK +WVPPSEFPPG E+ PV G G A + S + G+ D + E SS EY+ ALG +K+R+EADPFSMDLG
Sbjct: 390 IVRVFEEKEEINEAKQTKDVWVRGQSPNTAAAAG----SRTGLVEGWLLAFSTKRGSMVAEAPNALAAQHAFEKQEXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXTVPTTASVGGYMRAAGQLKLREEADSLSLELGTVSRGELVRVEQTSGLWVRVLYRGDSSGWVLTANKRGASLTPAEAGPAAAAKEFQAQEAXXXXXXX--XXXXNGAGDEDRPLTGAKAGSKAGSTAVSDDSGSRAEVARARSAXXXXXXXXXXXAAGSSGKGNAASVGQFLTSAGPLKVREEADPFSLDVATMEKGHIVKVLETSDMWVRVSYRGRDDGWVLTANKRGPILLPAEGGPAA-ASREFDAQEGAFAAEAXXXXXXXXXXXXXPLTGAKADGGSGGNGAWAPPSEFPPGHSKAXXXXAAGVEGSKVGPAAAEGVGPEFLATSGPLTGAKQTPTAPEVSGPGAAAGEDRPLT--GGGKGAWVPPSEFPPGHEGGAPSXXXXXXXXXXXXXXXXXXXXXXAGDEAVSAEFFTALGFVKVREEADPFSMDLGSVRKGDIVKVLETSKL---WVRVCYRGREDGWVLTANKRGPTLVPSEDQASAAGEFDEQEAAFAANGGGALPEDPSDRPLTGAKPPPAAPTAATGASEDRPLT-GGGK-GAWVPPSEFPPGQEDGPVSRGDGGDALVKKASAESVVDAPGQGNDSAGDEAVSS------EYMTALGFVKVREEADPFSMDLG 1107
BLAST of mRNA_F-serratus_M_contig6908.18005.1 vs. uniprot
Match: A0A6H5L4T0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4T0_9PHAE) HSP 1 Score: 398 bits (1023), Expect = 7.430e-118 Identity = 287/563 (50.98%), Postives = 336/563 (59.68%), Query Frame = 1
Query: 367 STAEVGDYMRAAGTSKLREEADSLSMEIGTVAAGELVRVVETSGLWVRVNYRGASDGWVLTANKRGPILSPAEGSPADAAQEFEDQEAAAGSGSGADVSTANDMGDDDRQLTGAKAGSTAPSEQIGDVRENARDATPPSXXXXXXXXAAEGP-GKASSAVGGQFLTSAGPLKIREEADPFSMDVGTMDKGDIVKVLEASGMWVRVDYRGRQDGWILTANKRGRSLVPVDDGDLSDAARTFDAQEARYAAEVAAXXXXXXXXDDDDRPLTGAKPAASAVEAEDRALDTGGGGKGSWAPPSEFPPGHEDSPVSEGTTAAARSGVEAETEKENVSGVIGSSGSVRYMRALGPIKIRDEADPFSMDLGVTEKGDLVKVLEASPTDGRWVRVSYRGREDGWILSANKKGPTLDPVEDLAAAAAGFDAQEASFAXXXXXXX---------------------VATEQGG------EDRPLNAGGGKDSSWVPPSEFPPGHEESPVEGGGTAAGTRCLSNADESEGSGKHGDKSNGELASSNGTGHAEYLKALGPLKLRDEADPFSMDLG 1971
+TA VG YMRAAG KLREEADSLS+E+GTV+ G+LV+V +TSGLWVRV YRG S GWVLTANKRG L+PAE A AA+EF+ R LTGA+AGSTA S XXXXXX A G GK ++A GQF+TSAGPLK+RE+ADPFS+DV TM+KG IVKVLE S MWVRV YRGR+DGW+LTANKRG L+P + GD + A+R FDAQEA +AA XXXXXXXX RPLTGAK D G GG G+WAPPSEFPPGH + P A A E V ++ G DEADPFSM+LGVTEKG +V+VLE S G W RVSYRGREDGW+L+ANK+GPTL P ED A+AA FDAQEAS XXXXXX A E G EDRPL GGGK +WVPPSEFPPGHE GG + + ++ + G ++ E S A++L ALG +K+R+EADPFSMDLG
Sbjct: 59 TTASVGGYMRAAGQLKLREEADSLSLELGTVSRGQLVKVEQTSGLWVRVLYRGDSSGWVLTANKRGASLTPAETGSAAAAKEFQ-AXXXXXXXXXXXXXXXXXXXXXXRPLTGARAGSTAVSXXXXXXXXXXXXXXXXXXXXXXXPPVAAGSSGKGNAASVGQFMTSAGPLKVREDADPFSLDVATMEKGHIVKVLETSDMWVRVSYRGREDGWVLTANKRGPILLPAE-GDDAAASREFDAQEAAFAAXXXXXXXXXXXXX---RPLTGAK------------TDGGSGGNGAWAPPSEFPPGHSEEP--------APPAPPARVEGSKVGPAAAEGVGPEFLATSG-----DEADPFSMELGVTEKGHIVRVLEKS---GLWARVSYRGREDGWMLTANKRGPTLVPPEDQASAAREFDAQEASLTAXXXXXXXXXXXXXXDGNRPLTGVKQTPTAAEVSGPGAVAGEDRPLT-GGGK-GAWVPPSEFPPGHE-----GGAPSXXXXXXAIGTKAGAAAVAGGRAGDEAVS------AKFLTALGFVKVREEADPFSMDLG 575 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6908.18005.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6908.18005.1 >prot_F-serratus_M_contig6908.18005.1 ID=prot_F-serratus_M_contig6908.18005.1|Name=mRNA_F-serratus_M_contig6908.18005.1|organism=Fucus serratus male|type=polypeptide|length=658bp GFALAQSVVRVLEEKEEVNPAKQTKEVWVRVQLPRSSSEGGYGGAASAGLback to top mRNA from alignment at F-serratus_M_contig6908:2218..12056+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig6908.18005.1 ID=mRNA_F-serratus_M_contig6908.18005.1|Name=mRNA_F-serratus_M_contig6908.18005.1|organism=Fucus serratus male|type=mRNA|length=9839bp|location=Sequence derived from alignment at F-serratus_M_contig6908:2218..12056+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig6908:2218..12056+ >mRNA_F-serratus_M_contig6908.18005.1 ID=mRNA_F-serratus_M_contig6908.18005.1|Name=mRNA_F-serratus_M_contig6908.18005.1|organism=Fucus serratus male|type=CDS|length=3948bp|location=Sequence derived from alignment at F-serratus_M_contig6908:2218..12056+ (Fucus serratus male)back to top |