mRNA_F-serratus_M_contig6902.18002.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig6902.18002.1 vs. uniprot
Match: D7FLK9_ECTSI (TsaA-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLK9_ECTSI) HSP 1 Score: 68.2 bits (165), Expect = 1.770e-11 Identity = 33/37 (89.19%), Postives = 34/37 (91.89%), Query Frame = 1
Query: 1 VNAAERSIRLSGVDLVDGTPVFDIKPYVPDYDCPGPR 111
VNAAERSI+LSGVDLVDGTPVFDIKPYVPDYD P R
Sbjct: 203 VNAAERSIKLSGVDLVDGTPVFDIKPYVPDYDRPRAR 239
BLAST of mRNA_F-serratus_M_contig6902.18002.1 vs. uniprot
Match: UPI0018A70660 (tRNA (adenine(37)-N6)-methyltransferase-like n=1 Tax=Penaeus monodon TaxID=6687 RepID=UPI0018A70660) HSP 1 Score: 55.8 bits (133), Expect = 3.470e-7 Identity = 25/39 (64.10%), Postives = 31/39 (79.49%), Query Frame = 1
Query: 22 IRLSGVDLVDGTPVFDIKPYVPDYDCPGPR--CDSVADS 132
I LSG+D++DGTPV DIKPY+P+YDCP P CDS + S
Sbjct: 86 IYLSGLDILDGTPVVDIKPYIPEYDCPQPEVHCDSPSSS 124
BLAST of mRNA_F-serratus_M_contig6902.18002.1 vs. uniprot
Match: A0A3B3STG3_9TELE (tRNA methyltransferase O n=1 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3STG3_9TELE) HSP 1 Score: 55.5 bits (132), Expect = 5.230e-7 Identity = 22/33 (66.67%), Postives = 28/33 (84.85%), Query Frame = 1
Query: 19 SIRLSGVDLVDGTPVFDIKPYVPDYDCPGPRCD 117
++ LSG+D++DGTPV DIKPY+PDYDCP R D
Sbjct: 85 TLHLSGIDMIDGTPVLDIKPYIPDYDCPLSRRD 117
BLAST of mRNA_F-serratus_M_contig6902.18002.1 vs. uniprot
Match: A0A3B3SUG2_9TELE (tRNA methyltransferase O n=2 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3SUG2_9TELE) HSP 1 Score: 55.5 bits (132), Expect = 5.430e-7 Identity = 22/33 (66.67%), Postives = 28/33 (84.85%), Query Frame = 1
Query: 19 SIRLSGVDLVDGTPVFDIKPYVPDYDCPGPRCD 117
++ LSG+D++DGTPV DIKPY+PDYDCP R D
Sbjct: 192 TLHLSGIDMIDGTPVLDIKPYIPDYDCPLSRRD 224
BLAST of mRNA_F-serratus_M_contig6902.18002.1 vs. uniprot
Match: A0A7E6FLW1_OCTVU (tRNA (Adenine(37)-N6)-methyltransferase-like isoform X1 n=4 Tax=Octopus vulgaris TaxID=6645 RepID=A0A7E6FLW1_OCTVU) HSP 1 Score: 55.5 bits (132), Expect = 5.530e-7 Identity = 24/42 (57.14%), Postives = 30/42 (71.43%), Query Frame = 1
Query: 19 SIRLSGVDLVDGTPVFDIKPYVPDYDCPGPRCDSVADSVRKN 144
SI SG+DL+DGTPV D+KPY+P YDCP + +SV KN
Sbjct: 120 SIHFSGIDLLDGTPVLDVKPYIPQYDCPLGASHAEFESVEKN 161
BLAST of mRNA_F-serratus_M_contig6902.18002.1 vs. uniprot
Match: A0A2D4C449_PYTIN (TsaA-like domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C449_PYTIN) HSP 1 Score: 54.7 bits (130), Expect = 9.000e-7 Identity = 24/33 (72.73%), Postives = 29/33 (87.88%), Query Frame = 1
Query: 1 VNAAERSIRLSGVDLVDGTPVFDIKPYVPDYDC 99
V+ A+R++ LSG+DLVDGTPV DIKPYVP YDC
Sbjct: 163 VDHAKRTVYLSGLDLVDGTPVLDIKPYVPAYDC 195
BLAST of mRNA_F-serratus_M_contig6902.18002.1 vs. uniprot
Match: T0RI72_SAPDV (TsaA-like domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RI72_SAPDV) HSP 1 Score: 54.7 bits (130), Expect = 9.450e-7 Identity = 26/62 (41.94%), Postives = 38/62 (61.29%), Query Frame = 1
Query: 1 VNAAERSIRLSGVDLVDGTPVFDIKPYVPDYDCPGPRCDSVADSVRKNCDVHVAVRGIAEIR 186
V+ A R++ +SG+DLVDGTP+ D+KPYVP YDC P +VA + +V + E +
Sbjct: 189 VDKAARTVVVSGIDLVDGTPIVDLKPYVPAYDCMEPTDVAVAPWIAATVSTQRSVAWVPEAK 250
BLAST of mRNA_F-serratus_M_contig6902.18002.1 vs. uniprot
Match: UPI001C3FA127 (tRNA (adenine(37)-N6)-methyltransferase-like n=1 Tax=Callorhinchus milii TaxID=7868 RepID=UPI001C3FA127) HSP 1 Score: 53.9 bits (128), Expect = 1.850e-6 Identity = 22/43 (51.16%), Postives = 34/43 (79.07%), Query Frame = 1
Query: 1 VNAAERSIRLSGVDLVDGTPVFDIKPYVPDYDCPGPRCDSVAD 129
+ ++ ++ LSG+D+++GTPV DIKPY+PDYD P RCD+ +D
Sbjct: 35 IKSSGDTVCLSGIDMIEGTPVLDIKPYIPDYDTP--RCDASSD 75
BLAST of mRNA_F-serratus_M_contig6902.18002.1 vs. uniprot
Match: A0A7S2NT46_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NT46_9STRA) HSP 1 Score: 53.9 bits (128), Expect = 1.890e-6 Identity = 24/46 (52.17%), Postives = 34/46 (73.91%), Query Frame = 1
Query: 1 VNAAERSIRLSGVDLVDGTPVFDIKPYVPDYDCPGPRCDSVADSVR 138
V+ + I +SG+DLVDGTPV D+KP+VP YDC G D++ +S+R
Sbjct: 253 VDQKQFCIHVSGLDLVDGTPVLDVKPFVPHYDCVGFDVDNIPNSLR 298
BLAST of mRNA_F-serratus_M_contig6902.18002.1 vs. uniprot
Match: A0A6M2CUB4_RHIMP (TsaA-like domain-containing protein (Fragment) n=2 Tax=Rhipicephalus microplus TaxID=6941 RepID=A0A6M2CUB4_RHIMP) HSP 1 Score: 52.4 bits (124), Expect = 1.960e-6 Identity = 24/42 (57.14%), Postives = 27/42 (64.29%), Query Frame = 1
Query: 4 NAAERSIRLSGVDLVDGTPVFDIKPYVPDYDCPGPRCDSVAD 129
N A + LSGVDLVDGTP+ DIKPY+P YD P D D
Sbjct: 18 NRAGAVLHLSGVDLVDGTPILDIKPYLPQYDSPQQETDKAPD 59 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6902.18002.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6902.18002.1 >prot_F-serratus_M_contig6902.18002.1 ID=prot_F-serratus_M_contig6902.18002.1|Name=mRNA_F-serratus_M_contig6902.18002.1|organism=Fucus serratus male|type=polypeptide|length=86bp VNAAERSIRLSGVDLVDGTPVFDIKPYVPDYDCPGPRCDSVADSVRKNCDback to top mRNA from alignment at F-serratus_M_contig6902:5273..5530+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig6902.18002.1 ID=mRNA_F-serratus_M_contig6902.18002.1|Name=mRNA_F-serratus_M_contig6902.18002.1|organism=Fucus serratus male|type=mRNA|length=258bp|location=Sequence derived from alignment at F-serratus_M_contig6902:5273..5530+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig6902:5273..5530+ >mRNA_F-serratus_M_contig6902.18002.1 ID=mRNA_F-serratus_M_contig6902.18002.1|Name=mRNA_F-serratus_M_contig6902.18002.1|organism=Fucus serratus male|type=CDS|length=516bp|location=Sequence derived from alignment at F-serratus_M_contig6902:5273..5530+ (Fucus serratus male)back to top |