mRNA_F-serratus_M_contig6901.18001.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig6901.18001.1 vs. uniprot
Match: A0A6H5LB97_9PHAE (TGc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB97_9PHAE) HSP 1 Score: 299 bits (766), Expect = 9.160e-100 Identity = 153/236 (64.83%), Postives = 173/236 (73.31%), Query Frame = 1
Query: 1 PAVVQRANQIVSQAGARTARAKAIALFRFVRDSIKFGFTGKFDCASPEETLRLGIGHCNPQGALFASLLQAEGIAARQHFVNLGNGVLRGVLRSAPPRLAHSYVEVHLPS-------PGE---------WLRVDAYIADPPLFHAAKSRLVKEGRKEGYGIHVDGSNEWDGRSDSFCQMADEDSQVSQDLGVFDEPHIFYGSQRNFQRLPWPISSVFGLIAAIPNSACDTIRREYV 660
PAV +RAN++VS AGA T RAKAIALF FVRDSIKFGFT +FD ASPEETL G+GHCNPQGALFASLLQA+GI ARQ FVNL NGVLRGVL P RL HSYVEV L PG W+RVD YIADP LFHAA++RLVKE EGYG+HV+G+NEWDG DSFCQMA+E +QV++ FDEP +FY S NFQRLPWP+ V G I PNS+ D IR E+V
Sbjct: 12 PAVAKRANKVVSLAGATTPRAKAIALFVFVRDSIKFGFTNRFDAASPEETLEAGMGHCNPQGALFASLLQAQGIPARQRFVNLSNGVLRGVLSPPPARLLHSYVEVKLDGQVGDGDPPGSSELGQDSLGWIRVDGYIADPALFHAARARLVKENMTEGYGVHVNGANEWDGTLDSFCQMAEETTQVTETFDAFDEPGLFYSSPENFQRLPWPVRLVLGWIVKEPNSSIDAIRAEFV 247
BLAST of mRNA_F-serratus_M_contig6901.18001.1 vs. uniprot
Match: D7FS63_ECTSI (TGc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS63_ECTSI) HSP 1 Score: 301 bits (770), Expect = 1.090e-97 Identity = 155/234 (66.24%), Postives = 173/234 (73.93%), Query Frame = 1
Query: 1 PAVVQRANQIVSQAGARTARAKAIALFRFVRDSIKFGFTGKFDCASPEETLRLGIGHCNPQGALFASLLQAEGIAARQHFVNLGNGVLRGVLRSAPPRLAHSYVEVHL--------PSPGE-------WLRVDAYIADPPLFHAAKSRLVKEGRKEGYGIHVDGSNEWDGRSDSFCQMADEDSQVSQDLGVFDEPHIFYGSQRNFQRLPWPISSVFGLIAAIPNSACDTIRREY 657
PAV +RANQ+VS AGA T RAKAIALF FVRDSIKFGFT +FD ASPEETL G+GHCNPQGALFASLLQA+GI ARQ FVNL NGVLRGVL P RL HSYVEV L P E W+RVD YIADP LFHAA++RLVKE EGYG+HV+G NEWDG SDSFCQMA+E +QV++ FDEP +FY S NFQRLPWP+ VFG I PNS+ D IR E+
Sbjct: 222 PAVSKRANQVVSLAGATTPRAKAIALFVFVRDSIKFGFTSRFDAASPEETLEAGMGHCNPQGALFASLLQAQGIPARQRFVNLSNGVLRGVLSPPPARLLHSYVEVQLDGRVDGGPPDCSELGQDSLGWIRVDGYIADPALFHAARARLVKENMTEGYGVHVNGVNEWDGASDSFCQMAEETTQVTETFEAFDEPGLFYSSPENFQRLPWPVRLVFGWIVKGPNSSIDAIRAEF 455
BLAST of mRNA_F-serratus_M_contig6901.18001.1 vs. uniprot
Match: A0A2P5LYF4_9HYPH (TGc domain-containing protein n=1 Tax=Methylobacterium sp. TaxID=409 RepID=A0A2P5LYF4_9HYPH) HSP 1 Score: 155 bits (391), Expect = 3.640e-43 Identity = 92/224 (41.07%), Postives = 126/224 (56.25%), Query Frame = 1
Query: 1 PAVVQRANQIVSQAGARTARAKAIALFRFVRDSIKFGFTGKFDCASPEETLRLGIGHCNPQGALFASLLQAEGIAARQHFVNLGNGVLRGVLRSAPPRLAHSYVEVHLPSPGEWLRVDAYIADPPLFHAAKSRLVKEGRKEGYGIHVDGSNEWDGRSDSFCQ-MADEDSQVS-QDLGVFDEPHIFYGSQRNFQ-RLPWPISSVFGLIAAIPNSACDTIRREYVG 663
P + RA I + G ++ R +A+A+FRFVRD I+FGF G F + L G G CN + LF +LL+A GI AR FV++ G+LRG L + HSY EV L G W+ D+YI D PLF A++RL EGR GYG H DG+ +WDGR D+F Q +A D ++ Q G + + FY ++ Q RL +P+S +F A N A +R G
Sbjct: 38 PLIRDRARTITT--GLKSDRERALAIFRFVRDDIRFGFAGAFWRQKASDVLATGYGFCNTKSTLFVALLRAAGIPARPVFVDIDAGILRGFLDPGTAYVDHSYTEVELE--GRWIATDSYIIDAPLFRNARARLAAEGRALGYGTHRDGTPDWDGRRDAFVQWVAARDPAITRQTFGRYHDVADFYDNEARAQSRLGFPVSLIFPAFALRANRAIAQLRAGGTG 257
BLAST of mRNA_F-serratus_M_contig6901.18001.1 vs. uniprot
Match: A0A150G6E5_GONPE (TGc domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G6E5_GONPE) HSP 1 Score: 154 bits (390), Expect = 5.880e-43 Identity = 79/161 (49.07%), Postives = 102/161 (63.35%), Query Frame = 1
Query: 43 GARTARAKAIALFRFVRDSIKFGFTGKFDCASPEETLRLGIGHCNPQGALFASLLQAEGIAARQHFVNLGNGVLRGVLRSAPPRLAHSYVEVHLPSPGEWLRVDAYIADPPLFHAAKSRLVKEGRKEGYGIHVDGSNEWDGRSDSFCQMADEDSQVSQDLG 525
G T +A+A+ FVR+ + FGFT FD ASP++TL G GHCNP+G L +L+ G+ A H VN+ N +LRG L S PP L H+Y EV + G WL VD+YI D LF AK RL+ EGR+ GYG+HV G+ WD SD+FCQ A + +DLG
Sbjct: 25 GCATEAERAVAIHDFVRE-LPFGFTPFFDSASPQQTLAYG-GHCNPKGTLMVEMLRRAGLEAHLHAVNINNAILRGCLASPPPVLTHTYTEVKVD--GRWLSVDSYIVDTELFARAKQRLLAEGRRLGYGVHVSGTCTWDAASDAFCQFASPQEMLLEDLG 181
BLAST of mRNA_F-serratus_M_contig6901.18001.1 vs. uniprot
Match: A0A7S2VVB6_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas chlamydogama TaxID=225041 RepID=A0A7S2VVB6_9CHLO) HSP 1 Score: 145 bits (366), Expect = 1.080e-39 Identity = 87/204 (42.65%), Postives = 116/204 (56.86%), Query Frame = 1
Query: 64 KAIALFRFVRDSIKFGFTGKFDCASPEETLRLGIGHCNPQGALFASLLQAEGIAARQHFVNLGNGVLRGVLR--SAPPRLAHSYVEVHLPSPGEWLRVDAYIADPPLFHAAKSRLVKEGRKEGYGIHVDGSNEWDGRSDSFCQMADEDSQVSQ--DLGVFDEPHIFYGS----QRNFQRLPWPISSVFGLIAAIPNSACDTIRR 651
KAIAL +VRD I FG+T FD ASP T+ L GHCNP+G LF +LL+A GI AR H VN+ VL G + P + H+Y EV L S +W++VD+Y+ D LF A++RL +EGR GYGIHV+G+ EWDG+SD+F Q + DLG D QR QR+ P + G + N+ +R+
Sbjct: 25 KAIALHNYVRD-ISFGWTPYFDLASPALTIALKTGHCNPKGELFVALLKAAGIEARLHAVNIKADVLHGCFPDGAGPAAVTHTYTEVLLGS--KWVKVDSYVVDGALFRQAQARLRQEGRTTGYGIHVEGTVEWDGKSDAFVQYVPQQQSYMTVADLGQIDSTARLMSEPLYLQRGVQRVLTPFRLMPGWFMRMVNARVQAVRQ 225
BLAST of mRNA_F-serratus_M_contig6901.18001.1 vs. uniprot
Match: A0A0D2LGH8_9CHLO (TGc domain-containing protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2LGH8_9CHLO) HSP 1 Score: 128 bits (321), Expect = 1.180e-32 Identity = 66/141 (46.81%), Postives = 88/141 (62.41%), Query Frame = 1
Query: 64 KAIALFRFVRDSIKFGFTGKFDCASPEETLRLGIGHCNPQGALFASLLQAEGIAARQHFVNLGNGVLRGVLRSAPPRLAHSYVEVHLPSPGEWLRVDAYIADPPLFHAAKSRLVKEGRKEGYGIHVDGSNEWDGRSDSFCQ 486
KA+ L+ FVRD+IKFG KFD E L LG G CNP+ LF +LL+A I AR H V++ V G H+Y EV L S +W+++D+Y+ D PLF AA+S++ + G +GYG+H G N+WDG SDSFCQ
Sbjct: 35 KALLLYFFVRDAIKFGIPAKFDNLKASEVLSLGYGFCNPKATLFVALLRAARIPARIHMVSINMAVNAGYGMPDNVYGDHAYTEVFLDS--QWVKLDSYVVDAPLFAAAQSKIKQLGWVQGYGVHSKGVNDWDGLSDSFCQ 173
BLAST of mRNA_F-serratus_M_contig6901.18001.1 vs. uniprot
Match: A0A2V0P809_9CHLO (TGc domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P809_9CHLO) HSP 1 Score: 127 bits (320), Expect = 2.000e-32 Identity = 74/162 (45.68%), Postives = 94/162 (58.02%), Query Frame = 1
Query: 1 PAVVQRANQIVSQAGARTARAKAIALFRFVRDSIKFGFTGKFDCASPEETLRLGIGHCNPQGALFASLLQAEGIAARQHFVNLGNGVLRGVLRSAPPRLAHSYVEVHLPSPGEWLRVDAYIADPPLFHAAKSRLVKEGRKEGYGIHVDGSNEWDGRSDSFCQ 486
P VV+RA+ I+ AG R A+ ++ FVRD+IKFG K D E L LG P+ LF +LL+A GI AR H V++ V G A H+Y EV L G W ++D+Y D PLF AA++RL G ++GYGIH G NEWDG SDSFCQ
Sbjct: 24 PKVVERAHDIIDGAGDEVQR--ALLIYFFVRDAIKFGVPVKLDMLKASEVLALGYACATPKTTLFVALLRAVGIPARMHMVSINMAVNAGFGMPANVYGDHAYAEVFLH--GCWFKLDSYAVDAPLFAAARARLKALGWRQGYGIHRRGINEWDGMSDSFCQ 181
BLAST of mRNA_F-serratus_M_contig6901.18001.1 vs. uniprot
Match: A0A5C8KXX7_9GAMM (Transglutaminase domain-containing protein n=1 Tax=Lysobacter sp. Alg18-2.2 TaxID=2603204 RepID=A0A5C8KXX7_9GAMM) HSP 1 Score: 127 bits (318), Expect = 2.450e-32 Identity = 66/162 (40.74%), Postives = 96/162 (59.26%), Query Frame = 1
Query: 85 FVRDSIKFGFTGKFDCASPEETLRLGIGHCNPQGALFASLLQAEGIAARQHFVNLGNGVLRGVLRSAPPRLAHSYVEVHLPSPGEWLRVDAYIADPPLFHAAKSRLVKEGRKEGYGIHVDGSNEWDGRSDSFCQMA---DEDSQVSQDLGVFDEPHIFYGSQ 561
+VRD ++FGF F E L+ G GH P+ LF ++L+A G+ AR HFV++G+ +L G++ PR H+ VEV L +WL D+++ DP F AA+ RL++EGR GYG+HVDG EW+GR+ SF Q+ E + DLGV + Y +
Sbjct: 60 YVRDQVRFGFGSHFWRLKASEVLQAGRGHALPKATLFTAMLRAVGVPARMHFVSVGSDLLSGLIDLPMPRYDHAVVEVWLGD--QWLACDSFVVDPVYFEAARLRLIREGRHWGYGVHVDGRVEWNGRAPSFSQLVIGGPEALPAAVDLGVRADALALYSEE 219
BLAST of mRNA_F-serratus_M_contig6901.18001.1 vs. uniprot
Match: UPI0018DF5C2C (transglutaminase-like domain-containing protein n=1 Tax=Roseomonas sp. OP-27 TaxID=2748667 RepID=UPI0018DF5C2C) HSP 1 Score: 124 bits (310), Expect = 5.250e-31 Identity = 73/186 (39.25%), Postives = 101/186 (54.30%), Query Frame = 1
Query: 1 PAVVQRANQIVSQAGARTARAKAIALFRFVRDSIKFGFTGKFDCASPEETLRLGIGHCNPQGALFASLLQAEGIAARQHFVNLGNGVLRGVLRSAPPRLAHSYVEVHLPSPGEWLRVDAYIADPPLFHAAKSRLVKEGRKEGYGIHVDGSNEWDGRSDSFCQMADEDSQ---VSQDLGVFDEPHIF 549
PA+ A ++V AG ARA+A+A+ RFV I FGF L G+G C + LF +LL+A G+ ARQ F+++ +L G+L PR+ H+ EV L G W+ VD+Y DPPLF A +RL EGR GYG H G+ WDG +FCQ+ D+ + +D GV + F
Sbjct: 39 PALRDLAQRLV--AGLPDARARAVAIHRFVSREIAFGFRPTLWDMHASAVLEAGMGFCTSKSTLFVALLRAAGVPARQRFLDIPAEILAGILDPGTPRVDHAITEVLLD--GAWIGVDSYTTDPPLFDRAVARLRAEGRVLGYGAHARGTTGWDGLRPAFCQLVDDGAPPDLTPRDHGVHADARAF 220
BLAST of mRNA_F-serratus_M_contig6901.18001.1 vs. uniprot
Match: UPI0019873E2A (Transglutaminase domain-containing protein n=1 Tax=Burkholderiaceae bacterium TaxID=2030806 RepID=UPI0019873E2A) HSP 1 Score: 119 bits (298), Expect = 5.270e-29 Identity = 76/181 (41.99%), Postives = 99/181 (54.70%), Query Frame = 1
Query: 52 TARAKAIALFRFVRDSIKFGFTGKFDCASPEETLRLGIGHCNPQGALFASLLQAEGIAARQHFVNLGNGVLRGVLRSAPPRLAHSYVEVHLPSPGEWLRVDAYIADPPLFHAAKSRLVKEGRKEGYGIHVDGSNEWDGRSDSFCQM--ADEDSQVSQDLGVFDEPHIFYGSQRNF-QRLPW 585
T R KA+A F +R S+ FG S L+ G+G C+ + L +LL++ GI AR FV+L L G++ + H+ EV L G WL VD+Y+ D L AA+SRL +EGRK GYG+HVDG WDG+S SF Q A S D G FD+P+ FY S QRL W
Sbjct: 78 TPRQKAMACFAHLR-SLPFGAIADSVGTSSLSVLKYGMGDCHTKSTLMVALLRSSGIPARMRFVSLKPDFLHGIVDNGTQPFEHAMTEVLLD--GRWLAVDSYVVDLRLAVAARSRLHQEGRKLGYGMHVDGQMSWDGQSHSFGQFHPAHIASMPLHDWGAFDDPYQFYSSVPYVKQRLDW 255 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6901.18001.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6901.18001.1 >prot_F-serratus_M_contig6901.18001.1 ID=prot_F-serratus_M_contig6901.18001.1|Name=mRNA_F-serratus_M_contig6901.18001.1|organism=Fucus serratus male|type=polypeptide|length=224bp PAVVQRANQIVSQAGARTARAKAIALFRFVRDSIKFGFTGKFDCASPEETback to top mRNA from alignment at F-serratus_M_contig6901:13289..14020- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig6901.18001.1 ID=mRNA_F-serratus_M_contig6901.18001.1|Name=mRNA_F-serratus_M_contig6901.18001.1|organism=Fucus serratus male|type=mRNA|length=732bp|location=Sequence derived from alignment at F-serratus_M_contig6901:13289..14020- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig6901:13289..14020- >mRNA_F-serratus_M_contig6901.18001.1 ID=mRNA_F-serratus_M_contig6901.18001.1|Name=mRNA_F-serratus_M_contig6901.18001.1|organism=Fucus serratus male|type=CDS|length=1344bp|location=Sequence derived from alignment at F-serratus_M_contig6901:13289..14020- (Fucus serratus male)back to top |