prot_F-serratus_M_contig69.17983.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig69.17983.1
Unique Name	prot_F-serratus_M_contig69.17983.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	290

Homology

[Close]

BLAST of mRNA_F-serratus_M_contig69.17983.1 vs. uniprot
Match: D7FIZ7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIZ7_ECTSI)

HSP 1 Score: 325 bits (832), Expect = 1.770e-108
Identity = 175/291 (60.14%), Postives = 213/291 (73.20%), Query Frame = 0

Query:    1 MTGNGHNVVAMALSALLPIAVIVGIVLSGRGEHGPWHNRSYGRRGARPGSSGRRLQT-TSNFATQLEITVCLTDDHTSESASSTAKQWETAIVEFFSIENEDYVQVDDSVTRCEVDDWQRRISIYNEADGNGTAADVASEQVDSIYPNTDGATTNFFTSVSSSINEQDTELAAPEATDFDILSLGFLVIWLDSSGDVVSSQGTTEDKDVVSIAGTDVWWPWWAWLIYAAVVLCCICPMLFFFFKWRRDKEAEAEMQSQ-VGKEVGTPAPPSATSTNPYGAG-TAEEYKTGK 288
            M      +V  AL+AL+P+ V++G+  SG G +G       G        +GRRLQT T +FATQLE+T+CLT++HTS+SA+ST  Q + A++E F IE+ D V VDDS+TRC VD+WQRR+SIYN AD  G+AAD+AS QVD IYP     TT F   +++SIN QD EL     TD D+LSLGFLVIWLDS+GDVV +QGTT  KDVV+I GTDVWWPWWAWLIYAAVVLCCICPMLFFFFKWRRDKEAE +      GK++G PAPPSATS+NPYG   +AEE K+GK
Sbjct:    3 MAQKPGKLVLKALAALIPLMVLIGVSTSGNGMNGATSKAVDG--------AGRRLQTATYDFATQLEMTICLTEEHTSDSATSTTDQLKVAVMEIFGIESADDVVVDDSLTRCTVDNWQRRVSIYNRADETGSAADIASAQVDQIYPG--ALTTAFLDDIATSINAQDAELVFT-GTDLDLLSLGFLVIWLDSNGDVVDNQGTTTSKDVVNIGGTDVWWPWWAWLIYAAVVLCCICPMLFFFFKWRRDKEAELDSYGGGSGKDMGAPAPPSATSSNPYGGNYSAEENKSGK 282

[Close]

BLAST of mRNA_F-serratus_M_contig69.17983.1 vs. uniprot
Match: A0A6H5JL50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL50_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 6.480e-7
Identity = 43/161 (26.71%), Postives = 81/161 (50.31%), Query Frame = 0

Query:   91 IVEFFSIENEDYVQVDDSVTRCEVDDW------QRRISIYNEADGNGTAADVASEQVDSIYPNTDGATTNFFTSVSSSINEQDTELAAPEATDFDILSLGFLVIWLDSSGDVVSSQGTTEDKDVVSIAGTDVWWPWWAWLIYAAVVLCCICPMLFFFFKWR 245
            I++ F +E E       +V + EV ++      +  I+I NE     +AA +++ Q++ +       ++ F T ++SS+ + +  +     T     SLG++V++ D    V ++   + D D V+  G D WWPW   L++  V+LCCICP+    + +R
Sbjct:  234 IMDVFEVEQEQTEGTTGTVEKREVTEFCDDGSEEWTIAIGNEPSDTQSAAVISAGQMELVR------SSEFTTLLASSLEDSNLSVNPAGLT---YSSLGYIVLY-DEDQAVTTANSDSLDSDFVAFRGPDQWWPWXXXLLFGLVLLCCICPLAACIYYYR 384

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig69.17983.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig69.17983.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FIZ7_ECTSI	1.770e-108	60.14	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A6H5JL50_9PHAE	6.480e-7	26.71	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 220..242
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 7..27
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 28..219
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 243..289
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..6
None	No IPR available	TMHMM	TMhelix		coord: 7..29
None	No IPR available	TMHMM	TMhelix		coord: 220..242

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig69	contig	F-serratus_M_contig69:635681..650252 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig69.17983.1	mRNA_F-serratus_M_contig69.17983.1	Fucus serratus male	mRNA	F-serratus_M_contig69 634181..650504 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig69.17983.1 ID=prot_F-serratus_M_contig69.17983.1|Name=mRNA_F-serratus_M_contig69.17983.1|organism=Fucus serratus male|type=polypeptide|length=290bp
MTGNGHNVVAMALSALLPIAVIVGIVLSGRGEHGPWHNRSYGRRGARPGS
SGRRLQTTSNFATQLEITVCLTDDHTSESASSTAKQWETAIVEFFSIENE
DYVQVDDSVTRCEVDDWQRRISIYNEADGNGTAADVASEQVDSIYPNTDG
ATTNFFTSVSSSINEQDTELAAPEATDFDILSLGFLVIWLDSSGDVVSSQ
GTTEDKDVVSIAGTDVWWPWWAWLIYAAVVLCCICPMLFFFFKWRRDKEA
EAEMQSQVGKEVGTPAPPSATSTNPYGAGTAEEYKTGKA*