mRNA_F-serratus_M_contig69.17979.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig69.17979.1 vs. uniprot
Match: D7FIZ0_ECTSI (GOLD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIZ0_ECTSI) HSP 1 Score: 197 bits (502), Expect = 9.790e-53 Identity = 97/147 (65.99%), Postives = 118/147 (80.27%), Query Frame = 3
Query: 1503 TSKAVVKVLAASAKSFEEFLEEQLRKDGWAKVLRTEGCNDLLVPRGKALTQVFLVGPRCYLCWEFRVKDHNIGFALRRRIQAMGGSAEEDIFELKRYRSGETFQGRWT--NEGNSTAAVIMMWDNSHTCLRPKTVAYIAKVLEPGPD 1937
TS V++L ASAKSFEEF++EQL++DG +VLR EG LLVPRGK L+Q F+V P C LCWEFRVKD+++GFALRRR Q MGGS EEDIFELKRY S ETFQGRWT ++ ++ A VIM+WDNS++CLRPKT+AY A+V PG D
Sbjct: 10 TSHDAVQILVASAKSFEEFVDEQLQEDGSGQVLRREGGTGLLVPRGKQLSQAFIVAPGCCLCWEFRVKDYDLGFALRRRFQGMGGSTEEDIFELKRYSSAETFQGRWTANSDSDAPAVVIMVWDNSYSCLRPKTLAYKAQVNRPGID 156
BLAST of mRNA_F-serratus_M_contig69.17979.1 vs. uniprot
Match: A0A836CBJ5_9STRA (GOLD domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBJ5_9STRA) HSP 1 Score: 120 bits (301), Expect = 4.070e-24 Identity = 60/146 (41.10%), Postives = 94/146 (64.38%), Query Frame = 3
Query: 1494 FEVTSKAVVKVLAASAKSFEEFLEEQLRKDGWAKVLRTEGCNDLLVPRGKALTQVFLVGPRCYLCWEFRVKDHNIGFALRRRIQAMGGSAEEDIFELKRYRSGETFQGRWTNEGNSTAAVIMMWDNSHTCLRPKTVAYIAKVLEPG 1931
+ TS+ V + +A ++ + E R++ + +V+RT+ DL VPRG + +LV C +CWE+RVKD++IGFA+R R+QAMGG+ EEDI + R+ SGE +G+WT + +V+++WDN + LR KT+AY +V PG
Sbjct: 337 YATTSQTVAEAIALGHIKLDQIVAEADREEFY-EVIRTDALMDLTVPRGGRYSLPYLVQQGCSICWEYRVKDYDIGFAVRLRLQAMGGAIEEDICSMARFGSGEAHRGKWT--ADEDRSVVLIWDNKFSMLRSKTLAYKVEVHRPG 479
BLAST of mRNA_F-serratus_M_contig69.17979.1 vs. uniprot
Match: A0A813HLX1_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HLX1_POLGL) HSP 1 Score: 95.1 bits (235), Expect = 7.150e-17 Identity = 50/128 (39.06%), Postives = 75/128 (58.59%), Query Frame = 3
Query: 1545 SFEEFLEEQLRKDGWAKVLRTEGCNDLLVPRGKALTQVFLVGPRCYLCWEFRVKDHNIGFALRRRIQAMGGSAEEDIFELKRYRSGETFQGRWTNEGNSTAAVIMMWDNSHTCLRPKTVAYIAKVLEP 1928
S + LE R++ W K ++ +G +L VP T + V L W FRVKDH+IGFA+R RIQ GGS EE++ ++RY + +T G W + + T +I+ +DN ++ LR KTVAY+ +P
Sbjct: 250 SARDTLENAAREEQW-KGIKIQGAEELAVPARTEHTCAYHVSKGSTLRWTFRVKDHDIGFAVRMRIQVWGGSQEEEVLSIERYDNADTISGSWVADEDRT--MILAFDNRYSKLRSKTVAYLVGTEKP 374
BLAST of mRNA_F-serratus_M_contig69.17979.1 vs. uniprot
Match: A0A7S1MKL5_ALECA (Hypothetical protein n=2 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1MKL5_ALECA) HSP 1 Score: 92.0 bits (227), Expect = 2.330e-16 Identity = 48/128 (37.50%), Postives = 74/128 (57.81%), Query Frame = 3
Query: 1545 SFEEFLEEQLRKDGWAKVLRTEGCNDLLVPRGKALTQVFLVGPRCYLCWEFRVKDHNIGFALRRRIQAMGGSAEEDIFELKRYRSGETFQGRWTNEGNSTAAVIMMWDNSHTCLRPKTVAYIAKVLEP 1928
S E L+ R++ W + ++ +G +L VP T + V L W FRVKDH+IGFA+R R+Q GGS EE++ ++RY S +T G W + T +++ +DN ++ LR KTVAY+ +P
Sbjct: 156 SARETLDIAAREEQW-RGIKVQGAEELSVPARTEHTSAYHVAKGSTLRWTFRVKDHDIGFAVRMRVQEWGGSREEEVLGVERYDSTDTISGSWVADEAQT--IVLAFDNRYSRLRAKTVAYLVGTEKP 280
BLAST of mRNA_F-serratus_M_contig69.17979.1 vs. uniprot
Match: A0A813AZC1_9DINO (Hypothetical protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A813AZC1_9DINO) HSP 1 Score: 88.6 bits (218), Expect = 1.340e-15 Identity = 46/128 (35.94%), Postives = 75/128 (58.59%), Query Frame = 3
Query: 1545 SFEEFLEEQLRKDGWAKVLRTEGCNDLLVPRGKALTQVFLVGPRCYLCWEFRVKDHNIGFALRRRIQAMGGSAEEDIFELKRYRSGETFQGRWTNEGNSTAAVIMMWDNSHTCLRPKTVAYIAKVLEP 1928
S + L+ R++ W K ++ +G +L VP T + V L W FRVK+H++GFA+R R+Q GG+ EE++ ++RY + +T G W + + T +I+ +DN ++ LR KTVAYI +P
Sbjct: 111 SARDTLDIAAREEQW-KDIKVQGAEELSVPARTEHTCAYHVTKGSTLRWTFRVKEHDVGFAVRMRVQVWGGAQEEEVLAMERYDNKDTISGSWVADEDRT--MILAFDNKYSKLRAKTVAYIVGTEKP 235
BLAST of mRNA_F-serratus_M_contig69.17979.1 vs. uniprot
Match: A0A812PXX9_9DINO (Hypothetical protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812PXX9_9DINO) HSP 1 Score: 88.6 bits (218), Expect = 5.520e-15 Identity = 46/128 (35.94%), Postives = 75/128 (58.59%), Query Frame = 3
Query: 1545 SFEEFLEEQLRKDGWAKVLRTEGCNDLLVPRGKALTQVFLVGPRCYLCWEFRVKDHNIGFALRRRIQAMGGSAEEDIFELKRYRSGETFQGRWTNEGNSTAAVIMMWDNSHTCLRPKTVAYIAKVLEP 1928
S + L+ R++ W K ++ +G +L VP T + V L W FRVK+H++GFA+R R+Q GG+ EE++ ++RY + +T G W + + T +I+ +DN ++ LR KTVAYI +P
Sbjct: 199 SARDTLDIAAREEQW-KDIKVQGAEELSVPARTEHTCAYHVTKGSTLRWTFRVKEHDVGFAVRMRVQVWGGAQEEEVLAMERYDNKDTISGSWVADEDRT--MILAFDNKYSKLRAKTVAYIVGTEKP 323
BLAST of mRNA_F-serratus_M_contig69.17979.1 vs. uniprot
Match: A0A7S1AHQ6_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AHQ6_NOCSC) HSP 1 Score: 87.0 bits (214), Expect = 2.850e-14 Identity = 42/112 (37.50%), Postives = 70/112 (62.50%), Query Frame = 3
Query: 1575 RKDGWAKVLRTEGCNDLLVPRGKALTQVFLVGPRCYLCWEFRVKDHNIGFALRRRIQAMGGSAEEDIFELKRYRSGETFQGRWTNEGNSTAAVIMMWDNSHTCLRPKTVAYI 1910
R++ W K ++ G +++VP T V+ V L W FRVKD++IGF R R+QA GGS EE++ ++RY S +T G W + T +++++DN+++ LR KT+A++
Sbjct: 217 REEQW-KGIKIRGAEEIVVPARTEHTSVYHVHKGTTLRWTFRVKDNDIGFGTRIRVQAWGGSKEEEVLAVERYDSADTISGSWVADEERT--MVLVFDNTYSRLRSKTIAFL 325
BLAST of mRNA_F-serratus_M_contig69.17979.1 vs. uniprot
Match: A0A812ZCU9_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812ZCU9_9DINO) HSP 1 Score: 89.4 bits (220), Expect = 3.600e-14 Identity = 48/128 (37.50%), Postives = 75/128 (58.59%), Query Frame = 3
Query: 1545 SFEEFLEEQLRKDGWAKVLRTEGCNDLLVPRGKALTQVFLVGPRCYLCWEFRVKDHNIGFALRRRIQAMGGSAEEDIFELKRYRSGETFQGRWTNEGNSTAAVIMMWDNSHTCLRPKTVAYIAKVLEP 1928
S + L+ R++ W K ++ +G +L VP T + V L W FRVK+H+IGFA+R RIQ GG+ EE++ ++RY + +T G W + + T +I+ +DN ++ LR KTVAYI +P
Sbjct: 200 SARDTLDIAAREEQW-KDIKVQGAEELSVPARTEHTCAYHVTKGSTLRWTFRVKEHDIGFAVRMRIQVWGGAQEEEVLAMERYDNKDTISGSWVADEDRT--MILAFDNKYSKLRAKTVAYIVGTEKP 324
BLAST of mRNA_F-serratus_M_contig69.17979.1 vs. uniprot
Match: A0A1Q9DTX3_SYMMI (GOLD domain-containing protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9DTX3_SYMMI) HSP 1 Score: 88.6 bits (218), Expect = 4.570e-14 Identity = 46/128 (35.94%), Postives = 75/128 (58.59%), Query Frame = 3
Query: 1545 SFEEFLEEQLRKDGWAKVLRTEGCNDLLVPRGKALTQVFLVGPRCYLCWEFRVKDHNIGFALRRRIQAMGGSAEEDIFELKRYRSGETFQGRWTNEGNSTAAVIMMWDNSHTCLRPKTVAYIAKVLEP 1928
S + L+ R++ W K ++ +G +L VP T + V L W FRVK+H++GFA+R R+Q GG+ EE++ ++RY + +T G W + + T +I+ +DN ++ LR KTVAYI +P
Sbjct: 200 SARDTLDIAAREEQW-KDIKVQGAEELSVPARTEHTCAYHVTKGSTLRWTFRVKEHDVGFAVRMRVQVWGGAQEEEVLAMERYDNKDTISGSWVADEDRT--MILAFDNKYSKLRAKTVAYIVGTEKP 324
BLAST of mRNA_F-serratus_M_contig69.17979.1 vs. uniprot
Match: A0A812I4C7_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812I4C7_9DINO) HSP 1 Score: 76.3 bits (186), Expect = 1.920e-11 Identity = 40/114 (35.09%), Postives = 65/114 (57.02%), Query Frame = 3
Query: 1545 SFEEFLEEQLRKDGWAKVLRTEGCNDLLVPRGKALTQVFLVGPRCYLCWEFRVKDHNIGFALRRRIQAMGGSAEEDIFELKRYRSGETFQGRWTNEGNSTAAVIMMWDNSHTCL 1886
S + L+ R++ W K ++ +G +L VP T + V L W FRVK+H+IGFA+R RIQ GG+ EE++ ++RY + +T G W + + T +I+ +DN + L
Sbjct: 137 SARDTLDMAAREEQW-KDIKVQGAEELSVPARTEHTCAYHVTKGSTLRWTFRVKEHDIGFAVRMRIQVWGGAQEEEVLAMERYDNKDTISGSWVADEDRT--MILAFDNKYRSL 247 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig69.17979.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig69.17979.1 >prot_F-serratus_M_contig69.17979.1 ID=prot_F-serratus_M_contig69.17979.1|Name=mRNA_F-serratus_M_contig69.17979.1|organism=Fucus serratus male|type=polypeptide|length=760bp MDSFSITPERRAEEIDLTISPESSSDRCALSQYPPSTAGSLDSRSREEISback to top mRNA from alignment at F-serratus_M_contig69:452819..458831+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig69.17979.1 ID=mRNA_F-serratus_M_contig69.17979.1|Name=mRNA_F-serratus_M_contig69.17979.1|organism=Fucus serratus male|type=mRNA|length=6013bp|location=Sequence derived from alignment at F-serratus_M_contig69:452819..458831+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig69:452819..458831+ >mRNA_F-serratus_M_contig69.17979.1 ID=mRNA_F-serratus_M_contig69.17979.1|Name=mRNA_F-serratus_M_contig69.17979.1|organism=Fucus serratus male|type=CDS|length=4560bp|location=Sequence derived from alignment at F-serratus_M_contig69:452819..458831+ (Fucus serratus male)back to top |