mRNA_F-serratus_M_contig69.17961.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig69.17961.1 vs. uniprot
Match: D8LGT3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGT3_ECTSI) HSP 1 Score: 250 bits (639), Expect = 4.590e-79 Identity = 143/222 (64.41%), Postives = 176/222 (79.28%), Query Frame = 1
Query: 73 MNSAFLTAVLCLLSLASSDAFISGVG-LTMRTSTSRPGAASVMSAEPQTRKSLLQQGVLGIASLA---VLSQPQRASAGLFQSDESKWAGVLDPKAAVKDASKLSSDTVKKSLEAINSYRAATKDIADLLEKDPQADVLPRIKETFRFAEFRKVLNDVNDVFDEDTQRGTDLIIRNMLQDALELANAAKLKPDVPRSERKGEILRKKLQKLEQAYSSLNAYL 726
M SAFL AVL LLS+AS+DAF++G L +R + SR A MSAEPQ+R++ LQQGV G+ SLA LSQP A S+ KWAGVLDP++AVKD+ K++SD VKK L A+ +Y++ATKDI+D L KDPQA+VLP++++TF+FAEFR+VLN VNDVFDEDTQRGTDLIIRNMLQDALEL+ A+K+KPDVPRS RK EIL KKL KL+QA+ LNAYL
Sbjct: 1 MKSAFLAAVLALLSVASTDAFVAGSAKLPVRAAASRTAAVE-MSAEPQSRQAFLQQGVAGVLSLAGIAALSQPASAGGLSPVSNSDKWAGVLDPRSAVKDSDKMASDGVKKDLAALKNYQSATKDISDTLAKDPQANVLPKVQQTFKFAEFRQVLNGVNDVFDEDTQRGTDLIIRNMLQDALELSQASKMKPDVPRSPRKVEILNKKLMKLDQAFEKLNAYL 221
BLAST of mRNA_F-serratus_M_contig69.17961.1 vs. uniprot
Match: A0A7R9VT45_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VT45_9STRA) HSP 1 Score: 127 bits (319), Expect = 7.580e-32 Identity = 80/177 (45.20%), Postives = 111/177 (62.71%), Query Frame = 1
Query: 196 MSAEPQTRKSLLQQGVLGIASLAVLSQPQRASAGLFQSDESKWAGVLDPKAAVKDASKLSSDTVKKSLEAINSYRAATKDIADLLEKDPQADVLPRIKETFRFAEFRKVLNDVNDVFDEDTQRGTDLIIRNMLQDALELANAAKLKPDVPRSERKGEILRKKLQKLEQAYSSLNAYL 726
M+ E TR LQQ + AS AVL PQ A+A + + VLDPK+A DA L+SD V+K+L A+ SY ++ K + D L D QAD+ P+I++ F FA+ R LN VN FDEDTQRGTD +IR ++QD EL A + K V RSER+ +I++ KL KL +A++ A++
Sbjct: 2 MAQEGTTRSQFLQQSLAAAASFAVL--PQSANAAKYGGFGAGSPEVLDPKSAEVDADILASDAVQKALGAVKSYASSVKAMQDTLSADSQADIGPKIRKDFDFAQLRADLNTVNSAFDEDTQRGTDRLIRIVMQDITELETANRQKDGVARSERRLDIMKGKLDKLGKAFNDFLAFV 176
BLAST of mRNA_F-serratus_M_contig69.17961.1 vs. uniprot
Match: A0A6U0F263_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A6U0F263_9STRA) HSP 1 Score: 111 bits (278), Expect = 1.520e-25 Identity = 79/213 (37.09%), Postives = 121/213 (56.81%), Query Frame = 1
Query: 88 LTAVLCLLSLASSDAFISGVGLTMRTSTSRPGAASVMSAEPQTRKSLLQQGVLGIASLAVLSQPQRASAGLFQSDESKWAGVLDPKAAVKDASKLSSDTVKKSLEAINSYRAATKDIADLLEKDPQADVLPRIKETFRFAEFRKVLNDVNDVFDEDTQRGTDLIIRNMLQDALELANAAKLKPDVPRSERKGEILRKKLQKLEQAYSSLNAYL 726
+TA L +L S+ AF + +++T+ +SAE Q+R L Q IA+LA P ++A + S + V+DP +A+ D L+S++V+K + I SY A K ++ + D QAD+ P I++ F + R N V + FDEDTQRGTD ++R +LQD EL A K KP VPRSE++ I++ KL KLE+A+ A++
Sbjct: 3 VTAAFALFTLGSASAFAPAPFGSRQSTTA-------LSAE-QSRSGFLAQSAAAIATLAAF--PATSNAAKYGSFGAGSPEVIDPSSAIIDQDILASESVQKCISGIRSYLTAIKSMSATVASDSQADIGPSIRKELDFVQVRADFNGVTEAFDEDTQRGTDRLVRIILQDITELETANKQKPGVPRSEKRLSIVKGKLAKLEKAFDDFLAFV 205
BLAST of mRNA_F-serratus_M_contig69.17961.1 vs. uniprot
Match: A0A7S2Y0S9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0S9_9STRA) HSP 1 Score: 110 bits (276), Expect = 3.700e-25 Identity = 77/215 (35.81%), Postives = 118/215 (54.88%), Query Frame = 1
Query: 94 AVLCLLSLASSD---AFISGVGLTMRTSTSRPGAASVMSAEPQTRKSLLQQGVLGIASLAVLSQPQRASAGLFQSDESKWA--GVLDPKAAVKDASKLSSDTVKKSLEAINSYRAATKDIADLLEKDPQADVLPRIKETFRFAEFRKVLNDVNDVFDEDTQRGTDLIIRNMLQDALELANAAKLKPDVPRSERKGEILRKKLQKLEQAYSSLNAY 723
A + LL LA++D AF++ G ST M A +R + + ++G + V S ++ F D++K++ GV+DPK A D +LS VK L+ + Y K+ + KDPQ ++ ++ F + R LN++N VFDEDTQRGTD +IR+ LQD EL ++A+ KP V RS RK ++ KKL+KLE ++ L A+
Sbjct: 5 AAIALLFLAANDQVSAFVAPAGHVQTRSTQM-----TMKAGEVSRTEFITKSLIGATATLVASSAPASAYNYFGGDKAKYSTPGVVDPKTASIDTDELSK--VKGDLDTLKGYLTTVKEFRAQMAKDPQTSLVADVQSKLDFGKMRTTLNNLNGVFDEDTQRGTDRLIRDTLQDVYELESSARQKPGVDRSPRKITLVNKKLEKLENVFTDLLAF 212
BLAST of mRNA_F-serratus_M_contig69.17961.1 vs. uniprot
Match: A0A7S2EU98_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EU98_9STRA) HSP 1 Score: 109 bits (272), Expect = 1.110e-24 Identity = 77/213 (36.15%), Postives = 121/213 (56.81%), Query Frame = 1
Query: 88 LTAVLCLLSLASSDAFISGVGLTMRTSTSRPGAASVMSAEPQTRKSLLQQGVLGIASLAVLSQPQRASAGLFQSDESKWAGVLDPKAAVKDASKLSSDTVKKSLEAINSYRAATKDIADLLEKDPQADVLPRIKETFRFAEFRKVLNDVNDVFDEDTQRGTDLIIRNMLQDALELANAAKLKPDVPRSERKGEILRKKLQKLEQAYSSLNAYL 726
+T L L++L S+ AF + +++T+ +SAE Q+R L Q A++A P ++A + S + VLDPK A+ D L +++V+K + I SY +A K ++ + D QAD+ P I++ F + R N V + FDEDTQRGTD ++R +LQD EL A + KP VPRSE++ I++ KL KLE+A+ A++
Sbjct: 3 VTVALALVTLGSASAFAPAPFGSRQSTTA-------LSAE-QSRSDFLTQSAAAFATIAAF--PSVSNAAKYGSFGAGSPEVLDPKTAIIDEDILKTESVQKCISGIRSYLSAVKSMSATVAADSQADIGPSIRKELDFVQVRADFNGVTEAFDEDTQRGTDRLVRIILQDITELETANRQKPGVPRSEKRLSIVQGKLSKLEKAFDDFLAFV 205
BLAST of mRNA_F-serratus_M_contig69.17961.1 vs. uniprot
Match: K0TRD5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TRD5_THAOC) HSP 1 Score: 106 bits (265), Expect = 1.510e-23 Identity = 70/177 (39.55%), Postives = 105/177 (59.32%), Query Frame = 1
Query: 193 VMSAEPQTRKSLLQQGVLGIASLAVLSQPQRASAGLFQSDESKWAGVLDPKAAVKDASKLSSDTVKKSLEAINSYRAATKDIADLLEKDPQADVLPRIKETFRFAEFRKVLNDVNDVFDEDTQRGTDLIIRNMLQDALELANAAKLKPDVPRSERKGEILRKKLQKLEQAYSSLNAY 723
V++AE R LQQ +A+ +L P +A+A + + V+DPK A+ D L S+ V+K+LEA+ Y+ +T D+ +L D QAD+ +I++ F F+ R LN +N DEDTQRGTD I+R +LQD EL + K KP VPRSE++ + KL KLE+++ A+
Sbjct: 42 VLNAEAS-RMEFLQQSAAAVAAFTML--PGQANAAKYGGFGAGSPEVIDPKDALVDEDILKSEPVQKALEAVKGYKQSTVDLKTVLSSDNQADIGAKIRKDFDFSVIRTDLNAINAALDEDTQRGTDRIVRAILQDITELEVSQKQKPGVPRSEKRLGNVIGKLDKLEKSFDDYLAF 215
BLAST of mRNA_F-serratus_M_contig69.17961.1 vs. uniprot
Match: A0A7S1VC33_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VC33_9STRA) HSP 1 Score: 105 bits (263), Expect = 2.580e-23 Identity = 71/183 (38.80%), Postives = 105/183 (57.38%), Query Frame = 1
Query: 181 GAASVMSAEPQTRKSLLQQ-GVLGIASLAV-LSQPQRASAGLFQSDESKWAGVLDPKAAVKDASKLSSDTVKKSLEAINSYRAATKDIADLLEKDPQADVLPRIKETFRFAEFRKVLNDVNDVFDEDTQRGTDLIIRNMLQDALELANAAKLKPDVPRSERKGEILRKKLQKLEQAYSSLNAY 723
G A+ +SA+ +R+ + Q G+ASLA ++ P A+A + + V+DP A+ D L SDTV+K+L + +Y K + + L + Q DV P +++ F F R LN VN FDEDTQRGTD +IR ++QD E+ A + V RS+R+ EIL KL KLE+A+S A+
Sbjct: 28 GKATALSAQATSRRDFMVQIASTGVASLATAIAAPGAANAAKYGGFGAGSPEVIDPSEAIIDDDVLKSDTVQKALNNLKAYLGGVKKMQEALVANAQTDVGPYVRKNFDFVALRSDLNAVNAAFDEDTQRGTDRLIRAIMQDITEVETANRQPEGVARSDRRLEILVAKLDKLEKAFSDYLAF 210
BLAST of mRNA_F-serratus_M_contig69.17961.1 vs. uniprot
Match: A0A7S2BZB6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BZB6_9STRA) HSP 1 Score: 104 bits (259), Expect = 8.530e-23 Identity = 75/186 (40.32%), Postives = 111/186 (59.68%), Query Frame = 1
Query: 163 TSTSRPGAAS--VMSAEPQ---TRKSLLQQGVLGIASLAVLSQPQRASAGLFQSDESKWAGVLDPKAAVKDASKLSSDTVKKSLEAINSYRAATKDIADLLEKDPQADVLPRIKETFRFAEFRKVLNDVNDVFDEDTQRGTDLIIRNMLQDALELANAAKLKPDVPRSERKGEILRKKLQKLEQAY 705
T +SR G++ VMS E +R++ L G LG+A L VL ++ L S E VLDPK+ D+ L+S +V+ SL+ + Y+ K + + ++ Q D+ P ++E+F F++ R LN+VN DEDTQRGTD +IR ++QD EL NA +KP PRS RK EIL +KL KL +++
Sbjct: 20 TPSSRVGSSRWVVMSGENSDIVSRRNALAVGGLGLAPL-VLGTKSASAGWLAGSPE-----VLDPKSGTIDSEILASSSVQDSLKNVRRYQDIVKQMEQAMIQNDQVDLGPAVRESFDFSKIRYALNNVNSALDEDTQRGTDRLIRGVIQDLAELENANLVKPGNPRSARKVEILNRKLSKLCKSF 199
BLAST of mRNA_F-serratus_M_contig69.17961.1 vs. uniprot
Match: A0A1Z5KC14_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KC14_FISSO) HSP 1 Score: 103 bits (257), Expect = 1.860e-22 Identity = 61/132 (46.21%), Postives = 82/132 (62.12%), Query Frame = 1
Query: 328 GVLDPKAAVKDASKLSSDTVKKSLEAINSYRAATKDIADLLEKDPQADVLPRIKETFRFAEFRKVLNDVNDVFDEDTQRGTDLIIRNMLQDALELANAAKLKPDVPRSERKGEILRKKLQKLEQAYSSLNAY 723
GVLDPK A DA L SD V+ +L+ + YR+A +D+ L+ D Q +V I + FA+ R LN VN F+EDTQRGTD +IR ++QD EL A K +PRS R+ EI+ KL KLE+A+S A+
Sbjct: 79 GVLDPKTAEIDADILKSDAVQSALKKVKGYRSAVQDMQAALKADSQVNVRKTIIKDLDFADLRDTLNTVNTAFEEDTQRGTDRLIRVIMQDITELEQANTQKDGIPRSPRRVEIMEGKLAKLEKAFSDFLAF 210
BLAST of mRNA_F-serratus_M_contig69.17961.1 vs. uniprot
Match: A0A7S2KKB7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KKB7_9STRA) HSP 1 Score: 101 bits (251), Expect = 2.990e-22 Identity = 59/153 (38.56%), Postives = 91/153 (59.48%), Query Frame = 1
Query: 268 LSQPQRASAGLFQSDESKWAGVLDPKAAVKDASKLSSDTVKKSLEAINSYRAATKDIADLLEKDPQADVLPRIKETFRFAEFRKVLNDVNDVFDEDTQRGTDLIIRNMLQDALELANAAKLKPDVPRSERKGEILRKKLQKLEQAYSSLNAYL 726
L+ PQ ASA + S + VLDPK A+ D L+++ V+KS+ + Y + + + + QAD++P I+ F R LN + FDEDTQRGTD ++R ++QD EL +KLK +PRSE++ ++ KL KLE+A+S L A++
Sbjct: 1 LASPQEASAAKYGSVGRDSSAVLDPKDAIIDDEILATEAVQKSISNLKGYLNIVQKLKSSVASNGQADIVPMIRADLDFVALRGALNTLTTAFDEDTQRGTDRLVRIIIQDISELEANSKLKEGIPRSEKRLVVINGKLDKLEKAFSDLLAFV 153 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig69.17961.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig69.17961.1 >prot_F-serratus_M_contig69.17961.1 ID=prot_F-serratus_M_contig69.17961.1|Name=mRNA_F-serratus_M_contig69.17961.1|organism=Fucus serratus male|type=polypeptide|length=219bp MNSAFLTAVLCLLSLASSDAFISGVGLTMRTSTSRPGAASVMSAEPQTRKback to top mRNA from alignment at F-serratus_M_contig69:119213..129020+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig69.17961.1 ID=mRNA_F-serratus_M_contig69.17961.1|Name=mRNA_F-serratus_M_contig69.17961.1|organism=Fucus serratus male|type=mRNA|length=9808bp|location=Sequence derived from alignment at F-serratus_M_contig69:119213..129020+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig69:119213..129020+ >mRNA_F-serratus_M_contig69.17961.1 ID=mRNA_F-serratus_M_contig69.17961.1|Name=mRNA_F-serratus_M_contig69.17961.1|organism=Fucus serratus male|type=CDS|length=1314bp|location=Sequence derived from alignment at F-serratus_M_contig69:119213..129020+ (Fucus serratus male)back to top |