mRNA_F-serratus_M_contig689.17950.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig689.17950.1 vs. uniprot
Match: A0A6H5L8D6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8D6_9PHAE) HSP 1 Score: 122 bits (306), Expect = 1.770e-26 Identity = 77/214 (35.98%), Postives = 117/214 (54.67%), Query Frame = 3
Query: 435 MRAAAMTRSDVAYAAHQLGKPNDNSGLLSTLGAAKAA*QFIWRTKDVGITYGGTSGSCTKLSG*WVDTDFATRPDTRRSV*RGAMVFGSGVISWFSRVKKINAAASFKPEYVVLAEVVNELRFLRQVKDFLTPPIDDK-ITIRESNEGAIKMATNHFSSKRTRHVDVKHLVVRDAVESGVVRIHYVKSEEQHADVLTKALDVNSFETRARFLLS 1073
M A TR D+A A + + + L+ AA + RT GI++ + L G + D DFAT+ RRSV G + G G +SWFSR +K ++ + EYV L +VV E+ FLRQ F+ P + I I E N+GAI++A N S+ ++HVDV+H +VR+ VE + + +V Q AD LTK+L ++FE+ F+++
Sbjct: 216 MWLATQTRPDIANAVRTVARYCASPKLVPW-NAAMDILGYARRTSQFGISFQRGTVEGLSLQG-YADADFATKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQFWRFMLPQVGMPCIPIFEDNQGAIQLAQNPISNSNSKHVDVRHHLVRELVERKEISVIHVPRRYQRADFLTKSLPKDAFESHREFVMN 427
BLAST of mRNA_F-serratus_M_contig689.17950.1 vs. uniprot
Match: A0A6H5K9K6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9K6_9PHAE) HSP 1 Score: 114 bits (285), Expect = 4.720e-24 Identity = 70/196 (35.71%), Postives = 106/196 (54.08%), Query Frame = 3
Query: 489 GKPNDNSGLLSTLGAAKAA*QFIWRTKDVGITYGGTSGSCTKLSG*WVDTDFATRPDTRRSV*RGAMVFGSGVISWFSRVKKINAAASFKPEYVVLAEVVNELRFLRQVKDFLTPPIDD-KITIRESNEGAIKMATNHFSSKRTRHVDVKHLVVRDAVESGVVRIHYVKSEEQHADVLTKALDVNSFETRARFLLS 1073
GKP +LS L A T D+GITY SG ++ +VD +A R RRSV A+ G V+S S+ ++I + ++ + EY+ E V E F+R V F+ P KI + E N+GAI + N FSS R++H+DV+ +R+ +SG + + Y+ ++EQHAD+LTKAL E L++
Sbjct: 186 GKPPPAGSILSYLNA----------TMDLGITYVRGSGLDLEV---YVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDHRNALMN 368
BLAST of mRNA_F-serratus_M_contig689.17950.1 vs. uniprot
Match: A0A6H5K9B2_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9B2_9PHAE) HSP 1 Score: 117 bits (292), Expect = 8.770e-24 Identity = 78/258 (30.23%), Postives = 130/258 (50.39%), Query Frame = 3
Query: 324 DEHHACSSGSNTPFQ-----GRCFIDQDVV*RNAYRPIAVGAMRAAAMTRSDVAYAAHQLGKPNDNSGLLSTLGAAKAA*QFIWRTKDVGITYGGTSGSCTKLSG*WVDTDFATRPDTRRSV*RGAMVFGSGVISWFSRVKKINAAASFKPEYVVLAEVVNELRFLRQVKDFLTPPIDD-KITIRESNEGAIKMATNHFSSKRTRHVDVKHLVVRDAVESGVVRIHYVKSEEQHADVLTKALDVNSFETRARFLLSAR 1079
D+ + CS+ S+TP R + + +R + M A TR D+ A + + + N + K ++ T + + + S + +VD DFA++ + RRSV ++ S + W S+ +K + ++ + EY+ + + V E F+ + FL P KI + E NEGAI +A N SS R++H+DV+H +R+ E GV+ + +V SEEQHAD+LTKAL + FE F+L +R
Sbjct: 240 DKFNVCST-SSTPASPANDNNRSLKEDEGAKDVPFREVVGSLMWIANRTRCDINIATRAVARQSHNPKKRDWKASQKIL-NYLLETAHLTLKF-KPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLFEVHRDFVLGSR 494
BLAST of mRNA_F-serratus_M_contig689.17950.1 vs. uniprot
Match: A0A8B9AF78_PHODC (secreted RxLR effector protein 161-like n=1 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B9AF78_PHODC) HSP 1 Score: 110 bits (274), Expect = 1.460e-23 Identity = 70/211 (33.18%), Postives = 115/211 (54.50%), Query Frame = 3
Query: 426 VGAMRAAAMTRSDVAYAAHQLG----KPNDNSGLLSTLGAAKAA*QFIWRTKDVGITYGGTSGSCTKLSG*WVDTDFATRPDTRRSV*RGAMVFGSGVISWFSRVKKINAAASFKPEYVVLAEVVNELRFLRQVKDFLTPPIDDKITIRESNEGAIKMATNHFSSKRTRHVDVKHLVVRDAVESGVVRIHYVKSEEQHADVLTKALDVNSF 1046
VG++ TR D+ +AA+ L +P+ N GA K + T D GI Y +G C+ L G + D+D+A D +S GSG+ SW S+ + I A +S + EYV A+ ++ +LR++ + + +++ + N+ AI + N S RT+H+ +K+ +R+A+E+G +++ Y KSEEQ AD+LTKAL N F
Sbjct: 35 VGSLLYLTATRPDIMFAANLLSCYMQEPSQNH-----YGAGKRVLRHFRGTLDYGILY--KAGECSSLIG-YSDSDWAGCLDDMKSTSGYVFSLGSGICSWASKKQNIVAQSSAEAEYVAAAKATSQAVWLRRILENIGERREEETILFCDNKSAIAIGKNPISHDRTKHIAIKYHFIREAIENGEIQLKYCKSEEQLADILTKALPKNKF 237
BLAST of mRNA_F-serratus_M_contig689.17950.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE) HSP 1 Score: 116 bits (291), Expect = 1.520e-23 Identity = 72/224 (32.14%), Postives = 119/224 (53.12%), Query Frame = 3
Query: 411 YRPIAVGAMRAAAMTRSDVAYAAHQLGKPNDNSGLLSTLGAAKAA*QFIWRTKDVGITYGGTSGSCTKLSG*WVDTDFATRPDTRRSV*RGAMVFGSGVISWFSRVKKINAAASFKPEYVVLAEVVNELRFLRQVKDFLTPPIDD-KITIRESNEGAIKMATNHFSSKRTRHVDVKHLVVRDAVESGVVRIHYVKSEEQHADVLTKALDVNSFETRARFLLSAR 1079
+R + M A TR D++ A + + + + S AA+ ++ T + + + S + +VD DFA++ + RRSV ++ S + W S+ +K + ++ + EY+ + + V E F+ + FL P KI + E NEGAI +A N SS R++H+DV+H +R+ E GV+ + +V SEEQHAD+LTKAL + FE F L +R
Sbjct: 1005 FREVVGSLMWIANQTRPDISNAVRAVAR-HSHEPKKSHWKAAQKILNYLLETAHLTLKF-KPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLFEVHRDFALGSR 1226
BLAST of mRNA_F-serratus_M_contig689.17950.1 vs. uniprot
Match: A0A6H5KSN7_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSN7_9PHAE) HSP 1 Score: 116 bits (291), Expect = 1.830e-23 Identity = 68/169 (40.24%), Postives = 99/169 (58.58%), Query Frame = 3
Query: 552 FIWRTKDVGITY--GGTSGSCTKLSG*WVDTDFATRPDTRRSV*RGAMVFGSGVISWFSRVKKINAAASFKPEYVVLAEVVNELRFLRQVKDFLTPPIDDK-ITIRESNEGAIKMATNHFSSKRTRHVDVKHLVVRDAVESGVVRIHYVKSEEQHADVLTKALDVNSFE 1049
++ R D+GIT+ G +G ++S D D A++ RRSV G ++ G G ISW SR +K ++ + EYV LA+V+ E+ FLRQV F P I + E N GAI++ N S+ ++H+DV+H +R+ V + I +V+S QHAD LTKALDV FE
Sbjct: 1602 YVVRASDLGITFRRGSVAGLSMEVS---ADADDASKAADRRSVSGGLVMCGGGCISWLSRTQKCVTLSTTQAEYVSLADVMKEVLFLRQVWRFTLPEAGMPFIPVFEDNRGAIQLVQNPISNSNSKHLDVRHHCIRELVGRKEISIFHVESAYQHADFLTKALDVGDFE 1767
BLAST of mRNA_F-serratus_M_contig689.17950.1 vs. uniprot
Match: A0A1Y1N3K4_PHOPY (Uncharacterized protein n=2 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1N3K4_PHOPY) HSP 1 Score: 109 bits (272), Expect = 2.850e-23 Identity = 65/204 (31.86%), Postives = 114/204 (55.88%), Query Frame = 3
Query: 423 AVGAMRAAAMT-RSDVAYAAHQLGKPNDNSGLLSTLGAAKAA*QFIWRTKDVGITYGGTSGSCTKLSG*WVDTDFATRPDTRRSV*RGAMVFGSGVISWFSRVKKINAAASFKPEYVVLAEVVNELRFLRQVKDFLTPPIDDKITIRESNEGAIKMATNHFSSKRTRHVDVKHLVVRDAVESGVVRIHYVKSEEQHADVLTKAL 1031
AVG++ AA+T R D+A+A + + + +N G A K +++ TKD+GI Y + S D+D+A+ DTR+S +G I+W SR ++ + ++ + EYV AE E +LR + ++ + + + N+ AIK+ N KRT+H+DV++ +++ ++G ++I YV+SE+Q AD+LTK L
Sbjct: 40 AVGSLMFAAITARPDIAFAVNVVSRFQNNQG-APHWNAVKRIMRYLKHTKDLGIRYTFSDEPVHGFS----DSDYASDVDTRKSTTGYVFNMANGAITWCSRRQQTTSVSTTEAEYVAAAEATKEAIWLRHLLSEISGKSIENVQLYVDNQSAIKLVKNPIFHKRTKHIDVRYHFIKEKFQNGDIKIEYVRSEDQLADILTKPL 238
BLAST of mRNA_F-serratus_M_contig689.17950.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE) HSP 1 Score: 115 bits (288), Expect = 3.040e-23 Identity = 72/224 (32.14%), Postives = 119/224 (53.12%), Query Frame = 3
Query: 411 YRPIAVGAMRAAAMTRSDVAYAAHQLGKPNDNSGLLSTLGAAKAA*QFIWRTKDVGITYGGTSGSCTKLSG*WVDTDFATRPDTRRSV*RGAMVFGSGVISWFSRVKKINAAASFKPEYVVLAEVVNELRFLRQVKDFLTPPIDD-KITIRESNEGAIKMATNHFSSKRTRHVDVKHLVVRDAVESGVVRIHYVKSEEQHADVLTKALDVNSFETRARFLLSAR 1079
+R + M A TR D++ A + + + + S AA+ ++ T + + + S + +VD DFA++ + RRSV ++ S + W S+ +K + ++ + EY+ + + V E F+ + FL P KI + E NEGAI +A N SS R++H+DV+H +R+ E GV+ + +V SEEQHAD+LTKAL + FE F L +R
Sbjct: 738 FREVVGSLMWIANQTRPDISNAVRAVAR-HSHEPKKSHWKAAQKILNYLLETAHLTLKF-KPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLFEVHRDFGLGSR 959
BLAST of mRNA_F-serratus_M_contig689.17950.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE) HSP 1 Score: 115 bits (288), Expect = 3.550e-23 Identity = 74/219 (33.79%), Postives = 119/219 (54.34%), Query Frame = 3
Query: 423 AVGA-MRAAAMTRSDVAYAAHQLGKPNDNSGLLSTLGAAKAA*QFIWRTKDVGITYGGTSGSCTKLSG*WVDTDFATRPDTRRSV*RGAMVFGSGVISWFSRVKKINAAASFKPEYVVLAEVVNELRFLRQVKDFLTPPIDD-KITIRESNEGAIKMATNHFSSKRTRHVDVKHLVVRDAVESGVVRIHYVKSEEQHADVLTKALDVNSFETRARFLLS 1073
A+G M A TR D+A A + + + N ++ + A ++ T D+GITY SG ++ +VD +A R RRSV A+ G V+S S+ ++I + ++ + EY+ E V E F+R V F+ P KI + E N+GAI + N FSS R++H+DV+ +R+ +SG + + Y+ ++EQHAD+LTKAL E L++
Sbjct: 1029 AIGCLMWPATFTRPDIATALNAVQR-NAHAPTMRDWKALVQILSYLNATMDLGITYVRGSGLDLEV---YVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDHRNALMN 1243
BLAST of mRNA_F-serratus_M_contig689.17950.1 vs. uniprot
Match: UPI001C9BC1AB (secreted RxLR effector protein 161-like n=1 Tax=Venturia canescens TaxID=32260 RepID=UPI001C9BC1AB) HSP 1 Score: 108 bits (271), Expect = 3.970e-23 Identity = 70/212 (33.02%), Postives = 110/212 (51.89%), Query Frame = 3
Query: 411 YRPIAVGAMRAAAMTRSDVAYAAHQLGKPNDNSGLLSTLGAAKAA*QFIWRTKDVGITYGGTSGSCTKLSG*WVDTDFATRPDTRRSV*RGAMVFGSGVISWFSRVKKINAAASFKPEYVVLAEVVNELRFLRQVKDFLTPPIDDKITIRESNEGAIKMATNHFSSKRTRHVDVKHLVVRDAVESGVVRIHYVKSEEQHADVLTKALDVNSF 1046
YR M AA +TR D+ YA Q+ + +N G A K ++I TK +GI Y G+ T S D DFA DTRRS + G + W S +K + ++ + EYV ++ E+ +LR + L + + + N+ AI++ N K+T+H+D+K+ +R+ VE G ++I YV +EEQ AD+LTKA+ + F
Sbjct: 37 YREAVGCLMFAAILTRPDIMYAVSQVSRFLNNPG-KEHWKAVKRILRYIQGTKYMGIKYSGSHIDFTAYS----DADFAGDVDTRRSTTGYITLMAGGPVIWSSHRQKCISRSTTEAEYVAASDASQEVTWLRILLQELCVDLKNPTPLHMDNQSAIRLTKNTEHHKKTKHIDIKYHYIRECVEHGAIKIIYVCTEEQLADILTKAVPRDKF 243 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig689.17950.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig689.17950.1 >prot_F-serratus_M_contig689.17950.1 ID=prot_F-serratus_M_contig689.17950.1|Name=mRNA_F-serratus_M_contig689.17950.1|organism=Fucus serratus male|type=polypeptide|length=138bp MVFGSGVISWFSRVKKINAAASFKPEYVVLAEVVNELRFLRQVKDFLTPPback to top mRNA from alignment at F-serratus_M_contig689:77716..79382+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig689.17950.1 ID=mRNA_F-serratus_M_contig689.17950.1|Name=mRNA_F-serratus_M_contig689.17950.1|organism=Fucus serratus male|type=mRNA|length=1667bp|location=Sequence derived from alignment at F-serratus_M_contig689:77716..79382+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig689:77716..79382+ >mRNA_F-serratus_M_contig689.17950.1 ID=mRNA_F-serratus_M_contig689.17950.1|Name=mRNA_F-serratus_M_contig689.17950.1|organism=Fucus serratus male|type=CDS|length=828bp|location=Sequence derived from alignment at F-serratus_M_contig689:77716..79382+ (Fucus serratus male)back to top |