prot_F-serratus_M_contig689.17948.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig689.17948.1
Unique Name	prot_F-serratus_M_contig689.17948.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	417

Homology

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BLAST of mRNA_F-serratus_M_contig689.17948.1 vs. uniprot
Match: D8LMC2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMC2_ECTSI)

HSP 1 Score: 333 bits (853), Expect = 3.150e-106
Identity = 197/384 (51.30%), Postives = 258/384 (67.19%), Query Frame = 0

Query:    6 DLAKEAGVQYGGDGDDTLMGMAAGTI---DIVIVGSTYSDDDHLFGLDTPTGEMDWYIAKLDRDNLSVVDDYVYVNGTTNDD-QVGGWHPI------AGVFRGHSVGFDAWVVKLDEDFD-FEWEVQFGTI-VYDIPSKVVLDSDDNIYVIGTSADYSNITSAEEQGEIQSMFVYKLDPSDGSTSWSVTTDLGYLEDESAAYGAVLSEDESELYVSGNTKGIIGDFDGDATDSPELFLVSLDVDDGDINWVWQSEANATAFGTGGVVLAEDGSPIVGGVAFGNQFNLTS---DYWEGGSGDMIAVKVDIDT---LEVVKYFNAPAASNLTEERPMAMVKVDDVDDGVFLIGYEDGDFEDEDVEPSDDDYNYLVLKVELDDLPEE 371
            DL  +  VQYGGDGDDT+  MA        IVIVGST SD++HLFGLDT   E D++IA+L   +L V   +V  +   N++  V G  P+      A  +   + G D + +K++ D D   WE  F T  V D+P+ +V+ SD  +YV+G SAD+      +E  E+ S+FVY LD  DGST W +TT+LG L D S A+GAVLS  E+ELY++G+T GII  +DGD T++ ELF+V++D+ +  ++WVWQSEANATAFGT G+VLA+DGSPIVGG+AFG+QFNL+S    YWE GSGD +A K+DID    +EV KYF A AASN T E+P ++VK  DV DGVFLIG +DG F+ ED E  D   NYLVLKVEL+ LPE+
Sbjct:  103 DLELQDSVQYGGDGDDTITAMAVDESVQSGIVIVGSTASDEEHLFGLDTAPREQDYFIAELSSGDLEVTKQFVNGSQFNNEELTVVGLEPVLDGAYFAAGWAASADGQDWFALKINHDMDDILWEEPFETTAVSDLPTAMVVSSD-AVYVVGYSADFEEDLDDDEVEEVSSLFVYALDVDDGSTLWELTTELGTLADGSQAHGAVLSASETELYIAGHTSGIIPGYDGDTTETDELFVVAIDIAEEAVSWVWQSEANATAFGTAGIVLADDGSPIVGGIAFGDQFNLSSASFTYWEFGSGDFVAAKIDIDDPEDIEVSKYFVAAAASNETREQPFSIVKDTDVADGVFLIGQQDGIFDGEDSEGGDP-LNYLVLKVELEVLPEK 484

[Close]

BLAST of mRNA_F-serratus_M_contig689.17948.1 vs. uniprot
Match: A0A6H5L735_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L735_9PHAE)

HSP 1 Score: 327 bits (838), Expect = 4.430e-104
Identity = 194/384 (50.52%), Postives = 255/384 (66.41%), Query Frame = 0

Query:    6 DLAKEAGVQYGGDGDDTLMGMAAGTID----IVIVGSTYSDDDHLFGLDTPTGEMDWYIAKLDRDNLSVVDDYVYVNGTTNDD-QVGGWHPI------AGVFRGHSVGFDAWVVKLDEDFD-FEWEVQFGTI-VYDIPSKVVLDSDDNIYVIGTSADYSNITSAEEQGEIQSMFVYKLDPSDGSTSWSVTTDLGYLEDESAAYGAVLSEDESELYVSGNTKGIIGDFDGDATDSPELFLVSLDVDDGDINWVWQSEANATAFGTGGVVLAEDGSPIVGGVAFGNQFNLTS---DYWEGGSGDMIAVKVDI---DTLEVVKYFNAPAASNLTEERPMAMVKVDDVDDGVFLIGYEDGDFEDEDVEPSDDDYNYLVLKVELDDLPE 370
            DL      Q+GGDGDDT+  MA   ++    I+IVGST SDD+HLFGLDT   E D++IA L  D+L V   +V  +   N++  V G  P+      A  +     G D + +K++ D D   W   F T  V D+P+ +V+  ++ +YV+G SAD+      +E  E+ S+FVY LD  DGST W +TT LG L D S A+GAVLS   SELY++G+T GII D+DGD+TD+ ELF+V++D+D  +++WVWQSEANATAFGT G+VLA+DGSPIVGG+AFG+QFNLTS    YWE GSGD +A K+DI   D +EV KYF A AASN T E+P +++K  D  DGVFLIG +DG F++ D E  D   NYLVLKVEL+ LPE
Sbjct:   97 DLEVVDSAQFGGDGDDTITSMAVDEVNQSGSIIIVGSTASDDEHLFGLDTAPREQDYFIAALSSDDLEVTKQFVNGSQYNNEELTVVGVEPVDEGSYFAAGWAASEDGQDWFALKINHDMDDILWNKSFETTAVSDLPTAMVV-GEEAVYVVGYSADFEGDLDDDEVEEVSSLFVYALDMDDGSTLWELTTQLGSLADGSQAHGAVLSG--SELYIAGHTSGIIPDYDGDSTDTDELFVVAIDIDSEEVSWVWQSEANATAFGTAGIVLADDGSPIVGGIAFGDQFNLTSASFTYWEFGSGDFVAAKLDIEDPDDIEVSKYFVAAAASNETREQPFSIIKDTDTVDGVFLIGQQDGVFDEGDSEGGDP-LNYLVLKVELEVLPE 476

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig689.17948.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig689.17948.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LMC2_ECTSI	3.150e-106	51.30	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L735_9PHAE	4.430e-104	50.52	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 32..348 e-value: 4.4E-6 score: 28.2
None	No IPR available	PANTHER	PTHR35580	FAMILY NOT NAMED	coord: 73..299
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 382..402
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 403..416
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..381
None	No IPR available	TMHMM	TMhelix		coord: 379..401
IPR011047	Quinoprotein alcohol dehydrogenase-like superfamily	SUPERFAMILY	50998	Quinoprotein alcohol dehydrogenase-like	coord: 106..359

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig689	contig	F-serratus_M_contig689:45912..56475 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig689.17948.1	mRNA_F-serratus_M_contig689.17948.1	Fucus serratus male	mRNA	F-serratus_M_contig689 45888..56475 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig689.17948.1 ID=prot_F-serratus_M_contig689.17948.1|Name=mRNA_F-serratus_M_contig689.17948.1|organism=Fucus serratus male|type=polypeptide|length=417bp
MFDPDDLAKEAGVQYGGDGDDTLMGMAAGTIDIVIVGSTYSDDDHLFGLD
TPTGEMDWYIAKLDRDNLSVVDDYVYVNGTTNDDQVGGWHPIAGVFRGHS
VGFDAWVVKLDEDFDFEWEVQFGTIVYDIPSKVVLDSDDNIYVIGTSADY
SNITSAEEQGEIQSMFVYKLDPSDGSTSWSVTTDLGYLEDESAAYGAVLS
EDESELYVSGNTKGIIGDFDGDATDSPELFLVSLDVDDGDINWVWQSEAN
ATAFGTGGVVLAEDGSPIVGGVAFGNQFNLTSDYWEGGSGDMIAVKVDID
TLEVVKYFNAPAASNLTEERPMAMVKVDDVDDGVFLIGYEDGDFEDEDVE
PSDDDYNYLVLKVELDDLPEEDDDSDSEWGFTYYYCGAAVFGVGIVLFAF
AYKCAKSSQVCVCVCL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR011047	Quinoprotein_ADH-like_supfam