mRNA_F-serratus_M_contig689.17951.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig689.17951.1
Unique NamemRNA_F-serratus_M_contig689.17951.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig689.17951.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig689contigF-serratus_M_contig689:102137..108185 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons3
Model size365
Cds size363
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig689.17951.1prot_F-serratus_M_contig689.17951.1Fucus serratus malepolypeptideF-serratus_M_contig689 102137..108185 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932101.7599447-CDS-F-serratus_M_contig689:102136..1022531622932101.7599447-CDS-F-serratus_M_contig689:102136..102253Fucus serratus maleCDSF-serratus_M_contig689 102137..102253 +
1690964147.5391724-CDS-F-serratus_M_contig689:102136..1022531690964147.5391724-CDS-F-serratus_M_contig689:102136..102253Fucus serratus maleCDSF-serratus_M_contig689 102137..102253 +
1622932101.7762246-CDS-F-serratus_M_contig689:107601..1076831622932101.7762246-CDS-F-serratus_M_contig689:107601..107683Fucus serratus maleCDSF-serratus_M_contig689 107602..107683 +
1690964147.5512297-CDS-F-serratus_M_contig689:107601..1076831690964147.5512297-CDS-F-serratus_M_contig689:107601..107683Fucus serratus maleCDSF-serratus_M_contig689 107602..107683 +
1622932101.7921567-CDS-F-serratus_M_contig689:108021..1081851622932101.7921567-CDS-F-serratus_M_contig689:108021..108185Fucus serratus maleCDSF-serratus_M_contig689 108022..108185 +
1690964147.562486-CDS-F-serratus_M_contig689:108021..1081851690964147.562486-CDS-F-serratus_M_contig689:108021..108185Fucus serratus maleCDSF-serratus_M_contig689 108022..108185 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig689.17951.1

>prot_F-serratus_M_contig689.17951.1 ID=prot_F-serratus_M_contig689.17951.1|Name=mRNA_F-serratus_M_contig689.17951.1|organism=Fucus serratus male|type=polypeptide|length=121bp
CLLQIVQAYECPFPFHPLLSPDADLNTSIPRNQGSSAMSDNKDETTVGGM
LETIGQYTEDAIATLTGESNTRTVDSATDAVKETADTASKSASDTANVAS
DAASETADTASKSASDTANTA
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mRNA from alignment at F-serratus_M_contig689:102137..108185+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig689.17951.1 ID=mRNA_F-serratus_M_contig689.17951.1|Name=mRNA_F-serratus_M_contig689.17951.1|organism=Fucus serratus male|type=mRNA|length=6049bp|location=Sequence derived from alignment at F-serratus_M_contig689:102137..108185+ (Fucus serratus male)
TGCTTGTTGCAAATTGTTCAGGCCTACGAGTGTCCATTCCCATTTCATCC
TCTTCTCTCTCCGGACGCCGATCTCAATACATCGATACCTCGAAACCAGG
GTTCAAGCGCTATGTCGGTGAGGCAGCGTGATATCTCGTGATGTTTGTCT
TCTACTTGATTAGAGTTGAGCATATGTTCATGGGGCGTTCGCTTGTCTGG
TCTTCGATGCTCACATATTCCGAATCCAGCAGATAATTTGTCCACCCCCT
GGACCTCTTTTACGCATTCTGTCAACTGCTGTATACTGTGTAGCGTTTAT
CAAAGATAAAAGGTGAACATCGATCCACCCAATGATAAACTAGAGCTCTA
CGTGCCTTGCCTCTACACGACACGGCCGTTGACATACCGCAGCTGTGTTG
GCGTCTCCTTTATCGGTGTCGAGTGGAACATAATCTCTCTCAAGTAGGTT
TATACCTTGTTTCTCGGATGCATATCCTTGGAGAAGAGATCTGAAGAAGC
ATCTGAAGCATTTAACTGCGTATAATAATTTTTTGTGTGGCATTTCGCCA
CCCACCCCTGCTCTTCTTCGTTGCTGTATTCCCTAGTGTTCCTCGATCCT
TTTGCGAATTGTCGACCGGATGCTGGCCGCAGTTTACTGGGGCACACGTA
GCGATAGTTTCAGCGGACGAGGTTATGTTTATTCCAAACTACGATTTAAC
AATTGAGCCACGCACACAGTCAGCGCTGACTCACAGAGCAGTTTTATGGT
TTATGCTCGGAAAAACATACTGGTAACAAGGAGCGGTCCTCCAGCGATAG
ACAGGCCAGCCAAATTCTACAACGCTGTACCGAAAAGATTTGGGAAAGAT
TTTCTAAAGGCAAGACAGGTACCGGCTTTCACTGCTGCAGCACTTCCTGA
GCGTGCTCCTTGCTACTATTCAGACTACAGCAGTACTATTCACCAACTCT
CGCTATTGCCGCACGGGCGAGCGGTGCTGGTTGATGGACTGTACCCTAAG
CTGCTCGACAAAGCAATCCGATTCTGGTAGCGACTACAGCACATCGTTGT
TTTTTGTGATCCCCTTTGTGTTTGGTGACGGTTCAAAAAAAGAAGAATCC
TGGTCCTAGAGACAAGCTAATGATAATGGTCAGCTGGTCACCAATCTATG
AGAGGGGTGGTCAAGCAGGATAACAGGGCTCTAGTAACTATTGATTGGCG
ATGCCTACTTGACTCGCTCAACATCGAACGTGTATCCTCCGTTCTCTGGT
GTTCAGTTTGTTTCGTCTTCGTTCTGTTTTCATTTTTTTTTTGCTTTCTG
AAAAAGCCGTGGTCCTTCGTTCAATCGTTCTTCTTTCTACGGTATGCATG
CGCCCCTCCAGCCGTATGCAGTCATAATTACTGTACTACTGTCTGCGTCA
TTTTCTCGTTTTTTTGTTTCTTTGGAAATATTTCTTTTGAGTATTTCTGA
CCGTCTCCGCTTATCTTGTTGTCAGTACAGAGAGTACGTCGTACGTTTTT
TCTTCCGGGTGGTGTTTTTCTTCTTTTTGTGTTGTGTTTTCTTCCCATCC
ATTCTGGACATCAAGTTCGTTGGACGTACCAGCCGGGGCCACACAGGAGG
AAGGTCACACCGGATTTCTCATCCACCTTCCTTCTGCGGTGCGTGCCTTA
ATTTTTATCGCGAGAAGGATTCAGCAATTCCTTTCCCTCGTCGACGGCGA
AGTCGAATTTTGTGTACTAACGAATTAATCGTTCTCCACCCGTTGGGCAT
TTTATTATTATTATTATTTTTTTTAGTGAGAAAAATCCCGTTTGCCGAGA
TCGAACTCACATCCCAACGTGTCAGAAGGCTGCGAGGTACCTGCTGAGCC
ACCGGGGCGACCATTCTTGTTGCCATGATATGAGCTGGATTTTTTACATA
TCAGCCAATTATAGAGATTTCAATAAACCACAACTCGAATCAGAGTTAAG
CTGTAGACGCGTGTGTGTGCGTGTGTTTTTTAAAGAAAAATCAGAACGCA
CCTAGACCTTCTGATGTGTGCGTTTGTTTTATTCAATTGCACATGACCGC
GCATTTGTTGTTGTCTTCAGAAACCGTGGCGACATCTTCGCAGTACCTTA
TCTTTCTTTCTCTCAACGCAAAGAAACGAATTTTCGTGTTCACAAGAACA
GAAAAAAAAaacAAAAAAAAAAACAAAGAGAAAGTCCCAACACTACCGAA
AAATATGTAACAGGTTTCTAAAAATAAAATGTTGAGAAAAAACAAAAAAG
CATCGGGCAAAAAAAAACAAAAATGAACTATAGCCCATTGCTCCTTTTCG
GAAGCTGAGTCGCAAACAAAATACATCATGTACAGTCACACTTACAGAAA
GAGTATGTATCAACCGGGTAAGGTTGCTAAACCTGCTCGTGGTCAGTTGA
CAAGGGAAAATGGCCATTCTTGAGTTATAGGGTCACTCAATTGCGTACCT
AGAACATTCACTGCCGAGGGTCCGCCGACACATGGCCAGTAAACCTAAAC
GTAGTTCCGAACGAGCGCCTCCTTGGCAGGTCACCATATAGACCAATCAG
CGTGCGCCTCTCTTACCCACACTCAAGATATGAAGTGGGGTATATTGAAA
GTACCGGCGACTATAGGAGTACTTGAAGAAGCTATTTCATTTCGCCTGCA
AAGCCGATCAGCTACAACAGGACAAGAATACGAAGCACATGCATACGTAA
ATACATACATACATGTCAGAAAGGAAACGCGAATAAAACGAATGCATGAC
GTACAATTACGATAGTGTATATGCCACGTCACAATTGTAGTACTTTCGTC
ACAAGTGAATCGTTATTTCATCTCTACATTTGTCATGATGTGTTAACAAT
TACCATAGTGTATACGCTATGTCACAATTGTAGTAGTTTTGTCACAAGTG
AATCGTCAGTTCATCTCTACAATTACATTACTTTACACAACATTACACAG
TAGAGCATATACGCGACACTAGAGGAACACGCCAAAAAGGTTCGAACGCA
GTTAGAAAATGTCCAGCCCTCTTTCGAACACCCGTGGTTAGGGAATTTGG
TCGAAACATTTGGTTGGAATATGATCACACCCAAAAATTGTTTTGAAGAA
AAATCCGAACGCTGCGGTTGACGGCCGAGGAACCCTCTATCTGGTGCCCC
CTGCCCAGAGTGTCCACCACCTCCTGCCCCTACAGTCAAAGGGACACGCG
CTAAAGTATAGGTTCTGCAGTGATTGACCTTGACTCATCAAATCGTTCAT
CGCAATCTATTCCGTGAACAGTCGATCAAAGAGGATGAATGAGGTCCGCC
ACGGCGACCAGAAAGGGCATACAGTATGTATCTTGTGAACATTTTTGGAC
ACTTCATGTAGTACTAAAACTGTATGCAGTCTGGTCATCTCAAACGAAAG
TTTTACGGAGAATCAAAATGGAGACGGAGCAGGGTTCGTTCTCGCATCGA
AAATTTAAAATTTATACTGGTACGTATTAATGTTCGCCGATATGTTTTTT
TTTAAGAAAATACAGAACCCACCTTGTATCTTTTGTTTTATCACATAAAG
CAGAGTACGGATCAACCGGGTAAGGTTGCCAATCCTGCTCGTGGTCAGCT
GAACGGGGAAAATTTCAAAATTTAAATTTCCGTCACTGTGCATGCTTGAG
AACTTGGTTTCGCGATACGCATCCAGTCGTCCCGTCCCGCGTCAACCTGG
TCATCGCCATACACAGGCTGAATCTTGTGCTTACTTATGGGTTCCCCCCC
GAGTTTAGCGGCGGCGTCCATTTATAAAACCGCCATATGCCATCGAGTTA
GTCCTGAGGTTATCGGGTCACGCAATTGCGTACCAATGACGTTCACTGCC
GAGAGTCCGCCGGCACAGGGTTAGTAAACCTAAATTTAGTCCCGAACGAG
CGCTGCCTTGGCAGGTCACCATGGACCAATTTCTTTCCCACACCCGCTAC
TGGTATGAAGTGGGCATGTTGAAAGTACCTGTACGAACAGGTCAGTATGA
TATGCCGTTTCTGACCACCAGAAAAATAGTATCAAGTGTTTTTTGCTTTT
TCTGCTCGTCATTGCAGACCTCACTCATCCTCTGGAAAATACTCGTTCCT
CAACGGAAGTTGTTTGGACTCGCGAAACGGTTTTGGCAGTCCGGTCCCGC
GTCAGCCGGCTCATTTCCATACTCGGTCTAAAGCTGGTATTACTCACACG
AGATTCCTCCCGAGTTCCGCAGCGGTGTCCGTAGACATACTATTAATATA
CACATCTTACCTTTTGAAGCATTCCCCCAATTACCTTGCTTGGTAAACAT
CAGAGGCTGCGGTCGACTGCTGTCTGTGCTACAATTCCACCCTTTTGTTT
ATCCCCATCGTTTGTTTATGGCAACGGCACCCTAAAAATGAATGTCAGGA
AACGATTACGACAAAACTATCGCCCCCCCCCCTGGCTGGGCTGCTCAATG
TTTTTCCAGAAACAACACGCTGCACATCAGCTTGACTTTTTTCAAGTTCC
AATTTTCTGTCTAGACACGGCCTCATTTCAGGGCTCCCAAAATCGTTAAA
ACAAAGCAGCTTGATACGCCAATCTACTGAAAATGTTTCCCATGATTTTT
GAAAAAAAAGTAGGAATTTTGCAACTTAAAATTTCTCCTCAGTTTTGCCC
GAAGCTCTAGAACTACAGCAGTATTATATACTGTATAGTACTGCATTTTA
ATGTATCTTGTAAATTTTCTAGGAACCCGTCGGGCGTTTTATTGGTGAAA
TCCTTCATGGTGGCCACCGTTAAGCCGTGAAAATGTTAGCTGATACCTTC
GCGGCTTGGCATGGTGCAATTGTTTTCCTGCCTGCCCCCTCCTGGCTAAC
TACCTCCGCCCACCACAGCAATATAACACTGATTGCGCGCCCTACAGCAA
GTCAGTGTCCCAACGCCGAGTATGGGCAGAATCATATAGTGCACAGCTGT
AAGGGCAATCGGCAGATCTTTCAAGTTAATCTGTTTAAAAACATGTTTGC
TTTGTTTTTATTTTTTCTCATAAGCCTGATAGGCAGTAAAAAACTCCAAA
CCTAAGTTTCTTGAAACCGCGGTGGCCCCTTGTCGAAAAGTGTATGACGC
TTACAGTAAAAGTTTAAATGGCAAAAATATTAGTAGCCTACTTTCATGTT
TTGAGCGCTAGCTTTCAATCTCCCCCGCCACAGTTTCTTCGCTACATGCT
CATGCCTCTCCTTTCAAAAAGAGAAACAAAAAATCGTACTTACTCAACCT
ATCGGTCCAAACTCCACTCACGATTTGGTTCCGATTGACAGTGTGGCGAT
TGCAGAGAGGCAAAAGAACGTTTTATTCTTTTTTCGTTAACGTCCGATTC
CCCTTGCGAGCGATACACGCGCGAGAATCTGAACAGAGTCTTATTTACCT
CGACCTTTTTAACATGATTGATTGTTCCAATATGTGTAACGACCGTGAAA
CGAAACGTGCCCCAGGACAACAAGGACGAAACCACTGTAGGGGGCATGCT
GGAGACCATCGGACAGTACACCGAAGATGCGATCGCTACGTTGACAGGTA
AGTTTTGCCCCACCAGGCGAGAGACTTCCGTATTATTTTTCTTCCCTCCT
TTTCTTCTGTAATGTCGTACGTCCACGGTAAAATCGATTTCGAAAACCCT
ACATATCTCGAAGTGCGACGACCGTGGTTGAATCCTGTGGAGCGTACTTA
TGAACCCTTTGACAGGCAAGGGCGAAGAAGAAATGGAGGGAATATTTTCC
TTCACGAGGAATGCACTTATCTCGATTAATCACTGGAAAGGATATCATGG
TGGCAAATTAACGCCGCGGCTGACTCCTCTCCTTACATTTACACGTACCA
ATCGCATCACTGCTGAATGTGACGTCATGCAACAGGCGAGAGCAACACGA
GGACGGTCGACTCTGCCACCGATGCCGTAAAGGAGACCGCCGACACCGCT
TCTAAATCCGCCTCCGATACCGCCAATGTTGCGTCCGATGCCGCCAGCGA
GACCGCTGACACCGCTTCTAAATCCGCTTCCGATACTGCCAACACTGCG
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Coding sequence (CDS) from alignment at F-serratus_M_contig689:102137..108185+

>mRNA_F-serratus_M_contig689.17951.1 ID=mRNA_F-serratus_M_contig689.17951.1|Name=mRNA_F-serratus_M_contig689.17951.1|organism=Fucus serratus male|type=CDS|length=726bp|location=Sequence derived from alignment at F-serratus_M_contig689:102137..108185+ (Fucus serratus male)
TGCTTGTTGCAAATTGTTCAGGCCTACGAGTGTCCATTCCCATTTCATCC
TCTTCTCTCTCCGGACGCCGATCTCAATACATCGATACCTCGAAACCAGG
GTTCAAGCGCTATGTCGTGCTTGTTGCAAATTGTTCAGGCCTACGAGTGT
CCATTCCCATTTCATCCTCTTCTCTCTCCGGACGCCGATCTCAATACATC
GATACCTCGAAACCAGGGTTCAAGCGCTATGTCGGACAACAAGGACGAAA
CCACTGTAGGGGGCATGCTGGAGACCATCGGACAGTACACCGAAGATGCG
ATCGCTACGTTGACAGGACAACAAGGACGAAACCACTGTAGGGGGCATGC
TGGAGACCATCGGACAGTACACCGAAGATGCGATCGCTACGTTGACAGGC
GAGAGCAACACGAGGACGGTCGACTCTGCCACCGATGCCGTAAAGGAGAC
CGCCGACACCGCTTCTAAATCCGCCTCCGATACCGCCAATGTTGCGTCCG
ATGCCGCCAGCGAGACCGCTGACACCGCTTCTAAATCCGCTTCCGATACT
GCCAACACTGCGGCGAGAGCAACACGAGGACGGTCGACTCTGCCACCGAT
GCCGTAAAGGAGACCGCCGACACCGCTTCTAAATCCGCCTCCGATACCGC
CAATGTTGCGTCCGATGCCGCCAGCGAGACCGCTGACACCGCTTCTAAAT
CCGCTTCCGATACTGCCAACACTGCG
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