mRNA_F-serratus_M_contig688.17943.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig688.17943.1
Unique NamemRNA_F-serratus_M_contig688.17943.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig688.17943.1 vs. uniprot
Match: A0A6H5KJD0_9PHAE (CRAL-TRIO domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJD0_9PHAE)

HSP 1 Score: 340 bits (871), Expect = 2.330e-109
Identity = 174/275 (63.27%), Postives = 208/275 (75.64%), Query Frame = 2 
Query:  137 SEWVWEAD--PPSLTAEQSQMLDITIREVLASPL-SAGVDPKGGKSEVWRYMEAAQWRLEPVRSKRVSSFFLETLEWRRKEGVDSVMDRTDSFKREAVTGKMFVRGTCLLGRPLIWVHLGRDEDDLDPEADVRFLIYTVERAIASMGPEALGAKSKGQFCVVVDCSMVKGMGQLPSFTFCREAMSMLMLRYPFRLGKLFLVNAGMAVFYLWQGISLLLPQDTRKKIEVVAGTDKQRQEVLVRHISAEALRDGQLGCPGAPPFDAESYLAGRDAGG 952
            S W WE +  PPSLT EQ+ ML+ TI EV ASPL S      GG++ VWRY+E AQWRLEPVR KRVS FFL+TL WR+  GVD+V+DR  +F  EA +GK+FVRGT LLGRPLIWVH G ++    PEA +RFL+YTVERAIASM PE     SKGQFCVV+DC+   G GQLPS  F REA+SMLMLRYP RLG LF+VNAG  V+YLW+ ISLLL   TR+K+ VV+GT++Q++EVL++HIS +AL  G+LG  GAPPF AESYL G DAGG
Sbjct:   17 STWSWECESPPPSLTPEQASMLETTIAEVQASPLCSDAAVANGGRTAVWRYLEGAQWRLEPVRGKRVSDFFLDTLAWRQDGGVDTVLDRAHTFVDEASSGKLFVRGTSLLGRPLIWVHAGWEDSASGPEASLRFLVYTVERAIASMEPETSTPASKGQFCVVIDCTATGGDGQLPSLAFVREAVSMLMLRYPSRLGNLFIVNAGNMVYYLWRAISLLLSPVTREKVVVVSGTEQQQREVLLQHISEDALEGGRLGLKGAPPFHAESYLKGGDAGG 291
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BLAST of mRNA_F-serratus_M_contig688.17943.1 vs. uniprot
Match: A0A835YZF0_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZF0_9STRA)

HSP 1 Score: 110 bits (276), Expect = 1.930e-23
Identity = 76/226 (33.63%), Postives = 118/226 (52.21%), Query Frame = 2 
Query:  167 SLTAEQSQMLDITIREVLASPLS----AGVDPKGGKSEVWRYMEAAQWRLEPVRSKRVSSFFLETLEWRRKEGVDSVMDRT---DSFKREAVTGKMFVRGTCLLG-RPLIWVHLGRDEDDLDPEADVRFLIYTVERAIASMGPEALGAKSKGQFCVVVDCSMVKGMGQLPSFTFCREAMSMLMLRYPFRLGKLFLVNAGMAVFYLWQGISLLLPQDTRKKIEVVAG 820
            SL+ +Q  M+  T+R++   P+     AGV     ++  WRY++AA WR E VRSK +S +  +TLEWRR   V  +   T    + +    TG ++V G    G  PL+   L R +     E  + +++Y +ERA+  +  E    ++   FCV+ +C      GQ+P     REA+++LM  YP RL +L++VN G A    W+ +  LL  +TR KI  V G
Sbjct:    2 SLSEDQHAMIQSTLRQLQEVPVDLFEQAGVSFPPDEALCWRYLDAAGWR-ECVRSKPISEYIRDTLEWRRNLKVPKLAAETLLSPALQTNLCTGSIYVDGFDASGDHPLVMFRLARFKGTETTEDFIEYMVYNLERALLRVPQEQ---RALASFCVLFNCDTGDA-GQMPRLAAVREAVNVLMRHYPSRLHRLYVVNPGTAFALTWRVVRPLLEANTRNKIVFVRG 222
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BLAST of mRNA_F-serratus_M_contig688.17943.1 vs. uniprot
Match: A0A7S0N4T9_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0N4T9_9CRYP)

HSP 1 Score: 82.4 bits (202), Expect = 1.450e-13
Identity = 65/224 (29.02%), Postives = 102/224 (45.54%), Query Frame = 2 
Query:  275 RYMEAAQWRLEPVRSKRVSSFFLETLEWRRKEGVDSVMDRTDSFKREAVTGKMFVRGTCLLGRPLIWVHLGRDEDDLDPEADVRFLIYTVERAIASMGPEALGAKSKGQFCVVVDCSMVKGMGQLPSFTFCREAMSMLMLRYPFRLGKLFLVNAGMAVFYLWQGISLLLPQDTRKKIEVVAGTDKQ-RQEVLVRHISA-----EALRDGQLGCPGAPPFDAESY 928
            RY+ A  W L+     +  +   ETL+WR K   D +     S      TGK+FV G  L GRP++++    +   +D + ++R L+Y ++RA+  M  E  G    G+  VV+DC         P  T  +  + +L   YP RLG+  ++ A       ++ IS  + + T +KI  + G D   R+  L +H        E   D +L    A  FDA SY
Sbjct:   81 RYLAARNWNLD-----KAKNMLRETLDWRIKFQADEISGA--SVFENGKTGKVFVSGLDLQGRPVLYMRPAMENSQMDHDGNLRHLVYNMDRAVRCMD-EVNGV---GKMVVVLDCHNYSARNAPPLRT-SQATLGILQNHYPERLGQFVIIEAPWYFHLFFRAISPFIDKVTAQKILFITGKDAAARRAALAQHFDMARFPRELYGDAEL----AAVFDARSY 288
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BLAST of mRNA_F-serratus_M_contig688.17943.1 vs. uniprot
Match: A0A4U7KVA6_9BASI (CRAL-TRIO domain-containing protein n=4 Tax=Sporisorium TaxID=63265 RepID=A0A4U7KVA6_9BASI)

HSP 1 Score: 70.9 bits (172), Expect = 4.640e-9
Identity = 71/224 (31.70%), Postives = 105/224 (46.88%), Query Frame = 2 
Query:  170 LTAEQSQMLDITIREVLASPLSAGVDPKGGKSEVW------------RYMEAAQWRLEPVRSKRVSSFFLETLEWRRKEGVDSVMDRTDSFKREAVTGKMFVRGTCLLGRPLIWVHLGRDEDDLDPEADVRFLIYTVERAIASMGPEALGAKSKGQFCVVVDCSMVKGMGQLPSFTFCREAMSMLMLRYPFRLGKLFLVNAGMAVFYLWQGISLLLPQDTRKKI 805
            LTAEQ Q   +T  E     +S    PK    ++W            RY+ AA+  LE  + KR+ S    TLEWRR    + +     S   EA TGK  V G    GRPLI++   R E+    +A VR+L++T+ERAI  M P   G ++   + +++D          PS +  R   ++L   Y  RLG+ F+VN    +   +  I+  L   T++KI
Sbjct:   49 LTAEQQQK--VTDLEKYIRQISVEQPPKDDY-KIWEDKWLNEHNLYQRYLRAAKGDLENAK-KRIKS----TLEWRRDFRPEIIAP--GSVSSEAETGKQIVSGFDNDGRPLIYLRPAR-ENTTPSDAQVRYLVWTLERAIDFMPP---GVEN---YAIIIDYHKATSQSN-PSLSMARTVANILQNHYVERLGRAFIVNVPWFINAFFTAITPFLDPITKEKI 254
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BLAST of mRNA_F-serratus_M_contig688.17943.1 vs. uniprot
Match: A0A7S0DAC5_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0DAC5_MICPS)

HSP 1 Score: 69.7 bits (169), Expect = 4.800e-9
Identity = 62/230 (26.96%), Postives = 102/230 (44.35%), Query Frame = 2 
Query:  275 RYMEAAQWRLEPVRSKRVSSFFLETLEWRRKEGVDSVMDRTDSFKREAVTGKMFVRGTCLLGRPLIWVHLGRDEDDLDPEADVRFLIYTVERAIASMGPE---ALGAK---SKGQFCVVVDCSMVKGMGQLPSFTFCREAMSMLMLRYPFRLGKLFLVNAGMAVFYLWQGISLLLPQDTRKKIEVVAGTDKQRQEVLVRHISAEALRDGQLGCPGAPPFDAESYLAGRDA 946
            RY+ A  W L     K+    F  T  WR K   + +  R    + E  TGK ++ GT   GR ++ +  GR E+  +   ++RFLIYT+ERA     PE    LG+     + +  +++D +    +   P     RE +S+L   +P RL      N        W+ IS  +  +T +KI  V    ++    + R    E++ +  +G    P FD E++ +  DA
Sbjct:  133 RYLRARSWNL-----KKALKMFSATARWRAKTRPERIKWR--DVQAEGATGKQYLAGTDKEGRNVLVMRPGR-ENTKEHAGNIRFLIYTLERATWRPNPEDDHPLGSHVEHHREKLVLLIDFTGWT-LATAPPMRTSRETLSILQDHFPERLAVAVCYNPPWIFAVFWKAISPFIDPETYRKIRFVNPKREKEINRMKRMFKMESI-ERDMGGERDPAFDLEAFASEADA 352
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BLAST of mRNA_F-serratus_M_contig688.17943.1 vs. uniprot
Match: A0A8J5X440_DIALT (CRAL-TRIO domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X440_DIALT)

HSP 1 Score: 67.4 bits (163), Expect = 1.740e-8
Identity = 63/227 (27.75%), Postives = 96/227 (42.29%), Query Frame = 2 
Query:  275 RYMEAAQWRLEPVRSKRVSSFFLETLEWRRKEGVDSVMDRTDSFKREAVTGKMFVRG-------TCLLGRPLIWVHLGRDEDDLDPEADVRFLIYTVERAIASMGPEALGAKSKGQFCVVVDCSMVKGMGQLPSFTFCREAMSMLMLRYPFRLGKLFLVNAGMAVFYLWQGISLLLPQDTRKKIEVVAGTDKQRQEVLVRHISAEALRDGQLGCPGAPPFDAESYLA 934
            RY+ A    ++     + ++    T+ WR   G DS++DR +  + E  TGK FV         T L+ RP       R E+    E ++  L+YT+ERA+ASM   A G      F      SM       P     +E + +L   YP RLGK  L++A       ++ +   +   TR+KI  ++ T  Q  E L   +    +     G    P FD  +Y A
Sbjct:   81 RYLRARSMDVD-----KAAAMLRATIAWRHSFGADSIVDRLELVRTEGRTGKCFVAPFVDREGRTVLILRP-------RMENTRSYEGNIVNLVYTLERAVASM--RAGGPTKLFLFLDFKGYSMFNA----PPMKTSQETLHILQNHYPERLGKAVLLDAPWLFSGAFRALQPFIDPVTREKISFLSTTHAQHVEQLGAMVDRAVVETDLGGLLTKPHFDEAAYFA 289
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BLAST of mRNA_F-serratus_M_contig688.17943.1 vs. uniprot
Match: A0A2J6T7T4_9HELO (CRAL/TRIO domain-containing protein n=1 Tax=Hyaloscypha bicolor E TaxID=1095630 RepID=A0A2J6T7T4_9HELO)

HSP 1 Score: 67.8 bits (164), Expect = 2.740e-8
Identity = 72/276 (26.09%), Postives = 118/276 (42.75%), Query Frame = 2 
Query:  170 LTAEQSQMLDITIREVLA---SPLSAGVDPKGGKSEV-W-------RYMEAAQWRLEPVRSKRVSSFFLETLEWRRKEGVDSVMDRTDSFKREAVTGKMFVRGTCLLGRPLIWVHLGRDEDDLDPEADVRFLIYTVERAIASMGPEALGAKSKGQFCVVVDCSMVKGM-GQLPSFTFCREAMSMLMLRYPFRLGKLFLVNAGMAVFYLWQGISLLLPQDTRKKIEVVAGTDKQRQEVLVR------HISAEALRDGQLGCPGAPPFDAESYLAGRD 943
            LTAEQ    +  +  V +    P + G +    +SE+ W       RY+ A +W       + +S     TL WRR+ GV+ +    D    E+ TGK FV G  + GRP  +++ GR   +  P   V+ L++ +ER I  M P       +    ++++    K      P  +  RE +++L   YP RLG+  ++N    V   ++ I+  +   TR+K++     D  RQ V  +      H   E   D  +  P    F  E Y   R+
Sbjct:   79 LTAEQQSKYEAVLETVKSWKEVPSTKGKEGPITESEILWLTRECLLRYLRATKWNTADAEKRLLS-----TLTWRREYGVEELTG--DHISPESETGKQFVVGWDIAGRPCHYLNPGRQNTEPSPR-QVQHLVFMLERVIDIMVP------GQETLALLINFKTSKTRTNTAPGLSQGREVLNILQTHYPERLGRALIINIPWVVSGFFKLITPFIDPLTRQKLKF---NDDMRQHVPPQQLWDQFHGDMEFEYDHSVYWPALLKFAEERYSERRE 337
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BLAST of mRNA_F-serratus_M_contig688.17943.1 vs. uniprot
Match: A0A165ETN8_9APHY (CRAL/TRIO domain-containing protein n=1 Tax=Laetiporus sulphureus 93-53 TaxID=1314785 RepID=A0A165ETN8_9APHY)

HSP 1 Score: 65.9 bits (159), Expect = 7.060e-8
Identity = 53/177 (29.94%), Postives = 89/177 (50.28%), Query Frame = 2 
Query:  275 RYMEAAQWRLEPVRSKRVSSFFLETLEWRRKEGVDSVMDRTDSFKREAVTGKMFVRGTCLLGRPLIWVHLGRDEDDLDPEADVRFLIYTVERAIASMGPEALGAKSKGQFCVVVDCSMVKGMGQLPSFTFCREAMSMLMLRYPFRLGKLFLVNAGMAVFYLWQGISLLLPQDTRKKI 805
            RY+ A +W       KR+     ETL WRR+ GV  ++   +  + EAVTGKMF+ G  + GRP +++   R   + +    + +L +  ERAI  MGP   G ++     ++VD +      + PS    R  ++++   YP RLG+ F+ N    V   ++ IS  +   +R+K+
Sbjct:   76 RYLRATKWSSTKAAIKRLE----ETLVWRREYGVYDLIT-AEHVEPEAVTGKMFLFGYDVDGRPALYMRPSRQNTE-ESIVQMHYLTWIFERAIDLMGP---GVEN---IALMVDFA---DKAKNPSLAQTRNTLNIMQNHYPERLGRAFITNVPFLVNAFFKVISPFIDPVSREKM 237
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BLAST of mRNA_F-serratus_M_contig688.17943.1 vs. uniprot
Match: R9P3T7_PSEHS (Potential p-nitrophenyl phosphatase n=1 Tax=Pseudozyma hubeiensis (strain SY62) TaxID=1305764 RepID=R9P3T7_PSEHS)

HSP 1 Score: 66.6 bits (161), Expect = 1.010e-7
Identity = 57/177 (32.20%), Postives = 89/177 (50.28%), Query Frame = 2 
Query:  275 RYMEAAQWRLEPVRSKRVSSFFLETLEWRRKEGVDSVMDRTDSFKREAVTGKMFVRGTCLLGRPLIWVHLGRDEDDLDPEADVRFLIYTVERAIASMGPEALGAKSKGQFCVVVDCSMVKGMGQLPSFTFCREAMSMLMLRYPFRLGKLFLVNAGMAVFYLWQGISLLLPQDTRKKI 805
            RY+ AA+  L+  + KR+ S    TLEWRR    + +    DS  +EA +GK  V G    GRPLI++   R E+    +A VR+L++T+ERAI  M P   G ++   + +++D          PS +  R   ++L   Y  RLG+ F+VN    +   +  +   L   T+ KI
Sbjct:  129 RYLRAAKGDLDNAK-KRIKS----TLEWRRDFRPEIIAP--DSVSKEAESGKQIVTGFDNDGRPLIYLRPAR-ENTTPSDAQVRYLVWTLERAIDFMPP---GVEN---YAIIIDYHKATTQSN-PSLSTARTVANILQNHYVERLGRAFVVNVPWFINAFFTALGPFLDPITKDKI 290
[Close]
BLAST of mRNA_F-serratus_M_contig688.17943.1 vs. uniprot
Match: A0A2J6RKY6_9HELO (CRAL/TRIO domain-containing protein n=1 Tax=Hyaloscypha variabilis F TaxID=1149755 RepID=A0A2J6RKY6_9HELO)

HSP 1 Score: 65.1 bits (157), Expect = 1.970e-7
Identity = 71/279 (25.45%), Postives = 118/279 (42.29%), Query Frame = 2 
Query:  164 PSLTAEQSQMLDITIREVLAS----PLSAGVDPKGGKSEVW--------RYMEAAQWRLEPVRSKRVSSFFLETLEWRRKEGVDSVMDRTDSFKREAVTGKMFVRGTCLLGRPLIWVHLGRDEDDLDPEADVRFLIYTVERAIASMGPEALGAKSKGQFCVVVDCSMVKGM-GQLPSFTFCREAMSMLMLRYPFRLGKLFLVNAGMAVFYLWQGISLLLPQDTRKKIEVVAGTDKQRQEVLVR------HISAEALRDGQLGCPGAPPFDAESYLAGRD 943
            P LT EQ    + T+ E + S    P + G +    ++E++        RY+ A +W       +      L TL WRR+ GV+ +    D    E+ TGK F+ G  + GRP  ++  GR   +  P   V+ L++ +ER I  M P       +    ++++    K      P  +  RE +++L   YP RLG+  ++N    V   ++ I+  +   TR+K++     D  RQ V  +      H   E   D  +  P    F  E Y   R+
Sbjct:   75 PELTTEQQSKYE-TVLETVKSWKEIPSTKGKEGPVTENEIFWLTRECILRYLRATKWNTADAEKR-----LLATLTWRREYGVEDLTG--DHISPESETGKQFIVGWDIAGRPCHYLVPGRQNTEPSPR-QVQHLVFMLERVIDIMIP------GQETLALLINFKTSKTRTNTAPGISQGREVLNILQTHYPERLGRALIINIPWIVNGFFKLITPFIDPLTRQKLKF---NDDMRQHVPPQQLWNEFHGDMEFEYDHAVYWPALLKFAEERYSERRE 335
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig688.17943.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5KJD0_9PHAE2.330e-10963.27CRAL-TRIO domain-containing protein n=2 Tax=Ectoca... [more]
A0A835YZF0_9STRA1.930e-2333.63CRAL-TRIO domain-containing protein n=1 Tax=Tribon... [more]
A0A7S0N4T9_9CRYP1.450e-1329.02Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A4U7KVA6_9BASI4.640e-931.70CRAL-TRIO domain-containing protein n=4 Tax=Sporis... [more]
A0A7S0DAC5_MICPS4.800e-926.96Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
A0A8J5X440_DIALT1.740e-827.75CRAL-TRIO domain-containing protein n=1 Tax=Diacro... [more]
A0A2J6T7T4_9HELO2.740e-826.09CRAL/TRIO domain-containing protein n=1 Tax=Hyalos... [more]
A0A165ETN8_9APHY7.060e-829.94CRAL/TRIO domain-containing protein n=1 Tax=Laetip... [more]
R9P3T7_PSEHS1.010e-732.20Potential p-nitrophenyl phosphatase n=1 Tax=Pseudo... [more]
A0A2J6RKY6_9HELO1.970e-725.45CRAL/TRIO domain-containing protein n=1 Tax=Hyalos... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig688contigF-serratus_M_contig688:364698..372638 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score343.2
Seed ortholog evalue1.3e-91
Seed eggNOG ortholog2880.D8LGX4
Hectar predicted targeting categoryother localisation
EggNOG free text desc.intermembrane phospholipid transfer
EggNOG OGsKOG1470@1,KOG1470@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size1886
Cds size945
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig688.17943.1prot_F-serratus_M_contig688.17943.1Fucus serratus malepolypeptideF-serratus_M_contig688 365599..372598 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932100.972232-UTR-F-serratus_M_contig688:364697..3655981622932100.972232-UTR-F-serratus_M_contig688:364697..365598Fucus serratus maleUTRF-serratus_M_contig688 364698..365598 -
1690964147.1628087-UTR-F-serratus_M_contig688:364697..3655981690964147.1628087-UTR-F-serratus_M_contig688:364697..365598Fucus serratus maleUTRF-serratus_M_contig688 364698..365598 -
1622932101.0858643-UTR-F-serratus_M_contig688:372598..3726381622932101.0858643-UTR-F-serratus_M_contig688:372598..372638Fucus serratus maleUTRF-serratus_M_contig688 372599..372638 -
1690964147.222148-UTR-F-serratus_M_contig688:372598..3726381690964147.222148-UTR-F-serratus_M_contig688:372598..372638Fucus serratus maleUTRF-serratus_M_contig688 372599..372638 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932101.0172253-CDS-F-serratus_M_contig688:365598..3657961622932101.0172253-CDS-F-serratus_M_contig688:365598..365796Fucus serratus maleCDSF-serratus_M_contig688 365599..365796 -
1690964147.176911-CDS-F-serratus_M_contig688:365598..3657961690964147.176911-CDS-F-serratus_M_contig688:365598..365796Fucus serratus maleCDSF-serratus_M_contig688 365599..365796 -
1622932101.0326235-CDS-F-serratus_M_contig688:366211..3663851622932101.0326235-CDS-F-serratus_M_contig688:366211..366385Fucus serratus maleCDSF-serratus_M_contig688 366212..366385 -
1690964147.1864777-CDS-F-serratus_M_contig688:366211..3663851690964147.1864777-CDS-F-serratus_M_contig688:366211..366385Fucus serratus maleCDSF-serratus_M_contig688 366212..366385 -
1622932101.0468066-CDS-F-serratus_M_contig688:366625..3666941622932101.0468066-CDS-F-serratus_M_contig688:366625..366694Fucus serratus maleCDSF-serratus_M_contig688 366626..366694 -
1690964147.196952-CDS-F-serratus_M_contig688:366625..3666941690964147.196952-CDS-F-serratus_M_contig688:366625..366694Fucus serratus maleCDSF-serratus_M_contig688 366626..366694 -
1622932101.05883-CDS-F-serratus_M_contig688:372094..3725981622932101.05883-CDS-F-serratus_M_contig688:372094..372598Fucus serratus maleCDSF-serratus_M_contig688 372095..372598 -
1690964147.2088995-CDS-F-serratus_M_contig688:372094..3725981690964147.2088995-CDS-F-serratus_M_contig688:372094..372598Fucus serratus maleCDSF-serratus_M_contig688 372095..372598 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig688.17943.1

>prot_F-serratus_M_contig688.17943.1 ID=prot_F-serratus_M_contig688.17943.1|Name=mRNA_F-serratus_M_contig688.17943.1|organism=Fucus serratus male|type=polypeptide|length=315bp
MGGRRFRPNQSENSSLFLPQEMLEEKAAAEAGSEWVWEADPPSLTAEQSQ
MLDITIREVLASPLSAGVDPKGGKSEVWRYMEAAQWRLEPVRSKRVSSFF
LETLEWRRKEGVDSVMDRTDSFKREAVTGKMFVRGTCLLGRPLIWVHLGR
DEDDLDPEADVRFLIYTVERAIASMGPEALGAKSKGQFCVVVDCSMVKGM
GQLPSFTFCREAMSMLMLRYPFRLGKLFLVNAGMAVFYLWQGISLLLPQD
TRKKIEVVAGTDKQRQEVLVRHISAEALRDGQLGCPGAPPFDAESYLAGR
DAGGVINHVDPPPS*
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mRNA from alignment at F-serratus_M_contig688:364698..372638-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig688.17943.1 ID=mRNA_F-serratus_M_contig688.17943.1|Name=mRNA_F-serratus_M_contig688.17943.1|organism=Fucus serratus male|type=mRNA|length=7941bp|location=Sequence derived from alignment at F-serratus_M_contig688:364698..372638- (Fucus serratus male)
CAATTCCCGAAACACCTGAATACTGTCCGTGGATCAACATATGGGAGGGC
GTAGGTTCCGCCCAAATCAGAGCGAGAACTCATCTCTATTTCTTCCCCAA
GAGATGCTGGAAGAAAAGGCAGCCGCTGAGGCTGGTAGCGAGTGGGTATG
GGAGGCGGACCCCCCATCGCTGACAGCAGAGCAATCTCAAATGCTGGACA
TCACCATCAGAGAAGTGTTAGCCTCACCGCTGAGCGCCGGCGTTGACCCT
AAGGGAGGCAAGTCCGAAGTATGGAGATACATGGAGGCAGCGCAGTGGCG
TCTCGAGCCGGTCCGAAGCAAGCGAGTATCGTCATTTTTCCTGGAAACTT
TGGAGTGGAGGAGGAAGGAAGGAGTCGATTCCGTGATGGACAGAACGGAC
TCCTTCAAGCGCGAGGCTGTCACTGGAAAGATGTTCGTCAGGGGCACTTG
CCTTCTCGGGCGGCCGCTGATATGGGTTCACCTGGGGCGGGATGAAGATG
ACTTAGATCCGGAAGCAGACGTGCGATTCTTAATTTACACGGTGGTGAGA
TCATATATTCCAAAAATCACTATTATAAGTAGTCTGTCTTTCTGTACAGA
CGAATACTAACTTCCAAAATCAACTCGACATAGGTCTGAGCACCGGTCGG
TATCCTTTACCCTAGACCCAAACCGCAGTTACCCAAAGCAACAAACCCAA
ACTGGCGCACGAATGACAAACCTCATGTAGTTGTTCTGACAGTCAAGTTG
CCTGTACAAATCTGACGCGGCGCTAGCGCGCTCTCGGATTTGGACCGAAG
CTTGTGAGTGGTATATAGTATGTGTGTTGTCAAGAGTTTGTATTTCAGGG
TTTTCAAGAAAAGTTGTTGGATGGTGTATTTTATCCGCTCCAGATGATCA
GGACAGACCTCCAACAGACAGCGGCCGGGTAATTTGAAATATTATCCAGC
CGATGAGGACATCGTAGTATTCGACTGATGATTGATGCTTACAGTGTTTA
ATATTAATAGAGCGTAAGTCTTCAGGAAAACATGAGTGCTCATGGGTCAA
AACAGGTTTGAATGTTTAAACGACAAATACTTCGTATGCATGTATGTACT
GTTTGTACTGGTAATGCGTTATGTCCGACGAGTTATGTACGTACTTCTGT
ATGTACTGTTAATAACAGGAGCTCTCTGCTCTAGTCTAGAGTTACAGACA
GAGTGTGGCTCTGGGCGTGCAAGGGACAAAAGGGACATCAAACCATCTCT
CGCAAAATATAATTTGACATACCTCGTTCTGAACCATTCTGACATTAGGC
GGTACCATTCCTTATAAAATGTCAGTGTAACATGACCTGTCTTCGTGTAA
CCCTCCGATACGTGGCAAGGAAAAAACTGTTTGTGTCACTTTTCATGACC
TGCTTGGTAGATCGGTAGCAGGTAGCATCGGACAGTTTTTTCTGTAGATT
TTGGAATATGTACTGGAGAGCATTCCAGACAGTTCTTGCCGGTTTGTTTG
TTTGTATCTCACTTAGGGTCGATGTCGATGGGCCTCAACGTGCGTGCTAT
TAAGAGGTTACCAATCCCACCTGCTGTACAACGTTAACATCCTGCCTGGG
GGTCACTTCTGTGGAACCTGTCATCTTTCCCCGGTTCTCGCCTACGAATT
TGAATCGCGATGCAAGTTCAACCAATGGTTGAATTCTACTAACTGTACTG
TCTGTACCTGTTACAGTATCATACTACATTCGACATTCTCACCCTTCCCT
TCCCTCTACGAAAGCCAGAATAGAAGCATCACGACTCCGCACTATTGGCG
GTTAAATATAAATATATGGACGCCGCCGCGGAACTCGGGAGGAATCCCGT
AAGTAAGCACCAGATTCAGCCTGAGTATGGAGATGAGCAGGCTGACGCGG
GACGGGACTGCCGAAACCGTCTCGCGAGACCAAACTCTCAGGCACGAACG
CGGACAGGGGAATATTCTTTTTCCCTGTTCAGCTGACCACAAGCAGGATT
GGCAACCTTACCAGGTTGATCCAAACTCTTGCTATCCATATGTGTGACCA
TACATACTTTTGTCAGTGATTTACAAGGTGACTACTACTACTGCAGTATT
ATAGTAGATTACATACGTACTCGAATCGGGCGAAGGGCTGGTAGAAGCCA
TTGAAGTTCGTACCGAAAGACACTGTCTTGTTGTTTCTCACATTGACGCG
GATAGGTTCCCGATTTTCTGGGGTGGTTGGACCTGGCAAAAAAAGATGGG
AACATTTGTGTGTCGGGGACAAAAACCTCTACGTCGTATAAAAAGGGTTC
CCCAATGTAGTTAAACATAGGGTCAACAGTATAATATCGGGGAGAAGCCC
ACCGTTATACTGTACACTGACACTGTCTTGTTGTTTCTCACATTGACGCG
GATAGGTTCCCGATTTTCTGGGGTGGTTGGACCTGGCAAAAAAAGATGGG
AACATTTGTGTGTCGGGGACAAAAACCTCTACGTCGTATAAAAAGGGTTC
CCCAATGTAGTTAAACATAGGGTCAACAGTATAATATCGGGGAGAAGCCC
ACCGTTATACTGTACACTGACATTAATCTCCATGTATGGACACCAAGACA
AAACCAAGAGCAACATCAGACCAGGTTTACCTTCTGATCAGTCAAAATGT
TGGGGTTGTTTCAATGCGGGAGATCTACAAGTCATATCTTGAACCGTCCG
ATCATTATGTATGGTCATCACATATAGCAGAGTGTGGATCAACCGTGTAA
GGTTGCCAATTCTGCTCGTGGTCAGCTGAACAGGGAAAATGAATATCCCC
CTGTCCCCGTGCGTGCCCGAGAATTTGGTCTCGCGAGACGGGTTCAGCCG
TCCCGTCCCGCGTCAGCCTGCTCATCTCCATACTCAGGCTGAATCTGGTG
CTTACTTACGAGATTCCTCCCGAGTTCCGCGGCGGCGTCCATTTATGAAA
CCGCCATACGCCATCGGGTCAGTCCCGAGTTTATCGGGTCACGTAAGAGC
GTACCGATGGCGTTCACTGCCGAGAGTCCACCGGCACAGGGCCAGTAAAC
CTCAAGGTAGTTCCGAACGAGTGCTGCCTTGACAGGTCACCATGGACCAA
ATAATATACGCCTCTCTTTCCCACACCCACTATTGGTATGAAGTGGGCAT
GCTGAAAGTACCGGCGTTCAAAAGGTTTACCAGTAGGTGGGAACATTAGC
TGTGGAACAAAAACGTCTACCAATGTAGTTACATAGGGTTTGAGTAGCTG
GTTGTCACCCGTGATTGATTTGATTGGTTTGTTGAATTATCACATAAGCT
GATGATGTAAAAAATCCAGCCCGTGGTCACAGCGTAGAAAAACACCATCT
GGAAGTAAAACGTACCGGTACAACATACTCTCCATAATAGGTACAGTACA
AACATTCTCGGGAAAAAGCGATATCATATCTCCAAAGAAACTAAAAACCA
ACAAAAACTAAAGAGGACACACAGACAGCTGAACTCCGTCTGGCTGCCGG
AGCGCATGCATGTCGAAGGACGAAGAACGGAGAGCGATTGAACCAAATAC
ATGCTGTTACTTGTATGGCTTATGTTTCACTAATTTACCGAATAACTGCC
TAAAAGTGATCTATTAATAGTATGATAGGTAACCAACCACGTACACGTAC
TATTAATAGTATATTATTGTCTATTGCGGACGTCGTGAGAGTTCGATTCT
TGTGGAAACCAGAATCTGTATTCTGTATTCTGTATTCCGTAGCGGAAAGC
GTGAGAACGTGACGAGTGAGTAAAGTAAAATCCAACTATAATTGGTGGAA
GAGTGGTGGAAGAGTTCTGAACTTGCGTCGAGAAAAATATATTTAAGACG
AGAACCGAGGGGAGATGGGAAGATCCTTCGTGCCAAAGGCAGGATGGCAA
TAGCGTTGCAGTAGTAGGTGGGATTGATAACCTAGCACGTTGATGCACAT
CGGCCATACTAATAATAAGTGAGATACAGACAGAACAAACATATGACATA
AAAATACACAGAAATGTCGTTAGAAATTCAATGAGCCAATGAACCAATAC
AAATCATCCCCAAGTTAGAATGTACTGTATCTTGGGAGTCCAGCTCTAAA
TATCGAACCGGGCATTCCACACGGGGTCGCGCCGACCGTTTGATGTTTTT
CCTTAAAAACTCTACAAGTAGCAGCCCCAACATCCTCCCGAACACATCGA
AAGGTTCAATTATCTATCAATAGTAGTATACTACAGCCTCCGATACTTTC
AACATGCCCAATTCATACCAATGGTGGGTGTGGGCAAAGAGAGGCGCACA
TTAATCGGTCATAGTCCATGGTGACCTGCAAAGGCAGCACCCGTTACTGG
AACTACACTGAGAACTACTGGTCCTGTGCTGGCGGACTCTCGGCAGTGAA
CGCCATCGGACGGCAAGTGTTTTAAGCTACGGGGCAGAATAGACATAGCG
CGGGCAAATCAGAAGCCGTTTTTTACATAGCGCGGACCAATCACAGGTTG
TTTTAGCAGGCACAGCCACCAAACTTCATACGCTCGATGCAATACTAGAG
TACAGTTTGTTTTAGACATAGTCACCAAGCTCGATGTAATACTAGAGTAC
AGTAAGGCTCCAATACGCGAGGGAAAAACTACCGGTAGTACCGAGCATAC
AACAAGCAAAACAGTTCGACAGAGATGATGCTGCGTCCGCCTGTGTATTG
TGGCGCCCCTTCGAACATCTGTGAGTATATTACTGCCTAAACGGGTAGTG
GCACGCTCATCTTGAGCTGCTTCACTGCTCTCGTACAGGATCTACTCTAG
TCTGCGTGTTTGGGAATGCACCGCCGTTGTATGATAGGAGAGTTCCGCCA
TTTAGGCCTGGCAGATGAGCACAAATATTACTATGTATTTAGGCCTGTGC
ATTCTCGAAGAGAAGTTCTCCTCTGTCACAAGTGGGGTGGCTAGTGAAAC
GATAGCGAGCGACCTACATGGCACTCAGGGCTGGCATGATCGGGCAGCAT
AGGCATCACTCGACTTCTTGTGTTCAAATCTAGTAGAACAGAGTATTACT
CACGAAAACGTGTCACCAAGAGTATTCATCTTGTTTCGGTGAAAATTTCT
ACAAAGTAGTACGGTAGGGTTACACCGCTCTCCGTGAACGAAAAGAACGA
AAAGAATCAACACCCGAACCCCGCCCAGCAGGAGTGCCTGGGGATGATGC
CATCAATATCACCGCTAATCAGCTGCAAAAACACTACACTGCTGTGCACC
ATCGATCACATCGACACAAAAGAAAAGAAAAGCAACCAACCAACCAACCA
ACCAGAAAGACAACATACATCCTACACGGGCCGTGGAGTTCTTGCGATAG
GCTATTCATATTTATAGATCATATCTAATAGATGCCAGATGAATTTTGAT
GTTGACCTGGTTTCGCACGTAGCGGCTAGTCCGGGTCTAGTCTCTCTCGT
GTTCATATGCTACGGCTTTGAATAATAGCGATGGTGTGACTGGGTCACCA
TCTTTCCGCAATCGAGAAGACGATCTTACCATACCATACCATACAGGGAC
TGAGAAGGTCTAGATGCGTTCAATTTTTTCTTATAAATAGACACTTAGCT
CCTCTGAAGAGGGATGCTGTTAATAGGTACTTGTTATAGTACAGTATCAG
CGCGCACACGGGCGTGCGTAGACTTGTTGACGGGGGAGACGGTCACTAGA
GCCTATGGGGGTCATAATCTGTGCTAAAAAAAGAAGCCTTGAAAAGTGCG
GTGCTGTGTGTAGTTGTTCCCGGCCTTGATTTGAAATGAAGAAAATAGTA
CCAGGTATTGTATACAAAATACCAAATGGTGCCGATAATTAGACTAACAG
CTCTAAGTCTGTGGTCTCGCCTCTTGGCACACGTAATGCAATGCCTGCTA
TCGTGTCCAACCCACTTCCTGCGCCGCACATTGTTTTTCTTCAGGAGCGA
GCAATTGCCAGCATGGGACCGGAGGCATTGGGTGCCAAGAGCAAGGGCCA
ATTTTGTGTCGTGGTGAGCACGTTCGGCTAGGCACCGGGCACGCCCGTCT
AGGTTTTCATATGATACGTGATCCACCCTCCCTGCAAACTATTTTCCTTC
GATCGCGTACGGTACAATTACATCGATCTTGATATATTTGTAAAGCGGCC
GCCTCAATTTAGCTACTGTACCCCCATTTCCCAACTCGTACGTAACAAGA
CAATGCCTACCTTGCCCGATCCCCTTACACTTGCTCGGGCGTGGTTTCGA
AAGGTCGACTGCTCCATGGTGAAGGGTATGGGTCAGCTGCCTTCTTTTAC
CTTCTGCAGAGAAGCGATGTCGATGCTCATGCTCCGCTACCCTTTCCGCT
TAGGGAAACTGTTCTTGGTGAACGCCGGCATGGCCGTCTTCTACCTGTGG
CAGGGCATCTCACTTTTACTTCCTCAGGTAACGCTAAAAAGACCTTGTGG
GGTCCTCGGATAGCACGCGGTTCATCGCCCACCGCGTCGTGGTGGGTGCT
TCACGATGAGAAAATCCCTCCAAAGACAGTCGTTAGCGTCCCATTTTGTC
CGTCGCTGATGGGGACTAGGGGTACCCAACGGGCTTGAGTGCGGCAGGTC
TAAGGCAAGCAATCGCATCTTCTGTCCGACATTGATCCATCGCGATGCTT
CCGCCGAAGCAATCATGTACGTTCGAGTCGATGGACTTGGAGCTAAGTGT
AAAGCCGACGTTTTCCCGCGACAAAGTTGCGGAATAGAAACGCCTCCTCA
CGGTATGTCTTGGTACATGGGCGGCCTGCCCTTGTTCTGACAGTATCACC
CTCGTGTCACCCGACTTGTTCATCGCACCGGCCACGAAACAGGATACTCG
CAAGAAGATTGAGGTCGTCGCTGGAACTGACAAGCAACGGCAAGAGGTGC
TGGTCCGCCACATTTCGGCCGAGGCATTGCGCGACGGGCAGCTTGGCTGC
CCCGGGGCACCGCCGTTTGACGCAGAAAGTTACCTGGCTGGAAGAGATGC
GGGTGGGGTGATAAACCACGTCGACCCTCCACCATCTTGACAGGCTATTT
TGGTGTGGTGACATACGCTAGGAGACCCGCCCCAATCACGTCCCAAAGAT
AGGCGGTGAGCAAGGAGTTGGAAATATTCCACGGCAAGCGACGTTGTGTG
GGGCGTGCAGATTGAAAATACAGGATTTTGTGTTTGTGTGTTTGCATCTC
TTTCCGTAGATACTCGGGCAGCGGCAGAGGTTTACCGGTTCTTGTTCCTT
CCTTTACTCGGTGCAGCTACCATCCCCTTCCCGACGTGTCCGGTATCCCG
TGGTCTTTCTCTTTTGAGACGCGAGCCGCCCACGGCGTTATCAGGGTTGG
CGCTGTTGTGTTGGTTTGGCCGCGCAGATATACATTTTGAGTTTTGAGGT
TCCAATGTTCGAGTCAATTTTGCCTTGTGTTTTGTTTTCGTATACATTCT
TGCGCTTCCCGCCCTATACATGCACCCACTGAGCAAAGGAGACCCGTAGC
CCCCTCCATCTCGATTATCGCGTTTTCATAGCGTTGTTCGTATGTTACAG
CTATATACTGGTTTTAATAGCGCTATACGATGTATGTATGGTATTACTCC
CCCACCGCGCGGCGATTGTTTCCGGCAACAAAGAAAGCTTTTGAACGCGA
GCCCCCCTCGTAACGTGACGCATCGATTACATCGATTGCTCTTCTCTTTA
CTGAAGAGTCGGTCTCGCCCCCGGCAAAGAGTCAGTAAAACGTTGTATCG
GATCGTTCTCTGTTTGGCTCCTTGTCTCAAGAGTGGGCGTGGACCGGTGT
ACGCGGTGAAACGCCCAGCCGCAATAGACCTATTATTAATAGACCTATTA
TTAATATTAATAGTATAATTGACGTGGAGCGCTGCTGAAGAGTTACTTGC
AGTGAAAATCGCGAATGAGGTACACCACAGAGTTCCAAAAC
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Coding sequence (CDS) from alignment at F-serratus_M_contig688:364698..372638-

>mRNA_F-serratus_M_contig688.17943.1 ID=mRNA_F-serratus_M_contig688.17943.1|Name=mRNA_F-serratus_M_contig688.17943.1|organism=Fucus serratus male|type=CDS|length=1890bp|location=Sequence derived from alignment at F-serratus_M_contig688:364698..372638- (Fucus serratus male)
ATGGGAGGGCGTAGGTTCCGCCCAAATCAGAGCGAGAACTCATCTCTATT
TCTTCCCCAAGAGATGCTGGAAGAAAAGGCAGCCGCTGAGGCTGGTAGCG
AGTGGGTATGGGAGGCGGACCCCCCATCGCTGACAGCAGAGCAATCTCAA
ATGCTGGACATCACCATCAGAGAAGTGTTAGCCTCACCGCTGAGCGCCGG
CGTTGACCCTAAGGGAGGCAAGTCCGAAGTATGGAGATACATGGAGGCAG
CGCAGTGGCGTCTCGAGCCGGTCCGAAGCAAGCGAGTATCGTCATTTTTC
CTGGAAACTTTGGAGTGGAGGAGGAAGGAAGGAGTCGATTCCGTGATGGA
CAGAACGGACTCCTTCAAGCGCGAGGCTGTCACTGGAAAGATGTTCGTCA
GGGGCACTTGCCTTCTCGGGCGGCCGCTGATATGGGTTCACCTGGGGCGG
GATGAAGATGACTTAGATCCGGAAGCAGACGTGCGATTCTTAATTTACAC
GGTGATGGGAGGGCGTAGGTTCCGCCCAAATCAGAGCGAGAACTCATCTC
TATTTCTTCCCCAAGAGATGCTGGAAGAAAAGGCAGCCGCTGAGGCTGGT
AGCGAGTGGGTATGGGAGGCGGACCCCCCATCGCTGACAGCAGAGCAATC
TCAAATGCTGGACATCACCATCAGAGAAGTGTTAGCCTCACCGCTGAGCG
CCGGCGTTGACCCTAAGGGAGGCAAGTCCGAAGTATGGAGATACATGGAG
GCAGCGCAGTGGCGTCTCGAGCCGGTCCGAAGCAAGCGAGTATCGTCATT
TTTCCTGGAAACTTTGGAGTGGAGGAGGAAGGAAGGAGTCGATTCCGTGA
TGGACAGAACGGACTCCTTCAAGCGCGAGGCTGTCACTGGAAAGATGTTC
GTCAGGGGCACTTGCCTTCTCGGGCGGCCGCTGATATGGGTTCACCTGGG
GCGGGATGAAGATGACTTAGATCCGGAAGCAGACGTGCGATTCTTAATTT
ACACGGTGGAGCGAGCAATTGCCAGCATGGGACCGGAGGCATTGGGTGCC
AAGAGCAAGGGCCAATTTTGTGTCGTGGAGCGAGCAATTGCCAGCATGGG
ACCGGAGGCATTGGGTGCCAAGAGCAAGGGCCAATTTTGTGTCGTGGTCG
ACTGCTCCATGGTGAAGGGTATGGGTCAGCTGCCTTCTTTTACCTTCTGC
AGAGAAGCGATGTCGATGCTCATGCTCCGCTACCCTTTCCGCTTAGGGAA
ACTGTTCTTGGTGAACGCCGGCATGGCCGTCTTCTACCTGTGGCAGGGCA
TCTCACTTTTACTTCCTCAGGTCGACTGCTCCATGGTGAAGGGTATGGGT
CAGCTGCCTTCTTTTACCTTCTGCAGAGAAGCGATGTCGATGCTCATGCT
CCGCTACCCTTTCCGCTTAGGGAAACTGTTCTTGGTGAACGCCGGCATGG
CCGTCTTCTACCTGTGGCAGGGCATCTCACTTTTACTTCCTCAGGATACT
CGCAAGAAGATTGAGGTCGTCGCTGGAACTGACAAGCAACGGCAAGAGGT
GCTGGTCCGCCACATTTCGGCCGAGGCATTGCGCGACGGGCAGCTTGGCT
GCCCCGGGGCACCGCCGTTTGACGCAGAAAGTTACCTGGCTGGAAGAGAT
GCGGGTGGGGTGATAAACCACGTCGACCCTCCACCATCTTGAGATACTCG
CAAGAAGATTGAGGTCGTCGCTGGAACTGACAAGCAACGGCAAGAGGTGC
TGGTCCGCCACATTTCGGCCGAGGCATTGCGCGACGGGCAGCTTGGCTGC
CCCGGGGCACCGCCGTTTGACGCAGAAAGTTACCTGGCTGGAAGAGATGC
GGGTGGGGTGATAAACCACGTCGACCCTCCACCATCTTGA
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