prot_F-serratus_M_contig688.17939.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig688.17939.1
Unique Nameprot_F-serratus_M_contig688.17939.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length183
Homology
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BLAST of mRNA_F-serratus_M_contig688.17939.1 vs. uniprot
Match: D8LGY8_ECTSI (LisH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGY8_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 1.130e-34
Identity = 77/104 (74.04%), Postives = 84/104 (80.77%), Query Frame = 0 
Query:   66 EGTTSLADMKRALRQNFLNTGVIDDVTARLRRQFILEVRRKGLGVPGAREAVAA-----RCRSAGGISLRERVLNSLVVDHLTSNGFLQSLAIFLPESGLGDSS 164
            EG  SL D+KRALR NF  TGVIDDVTARLRRQF+LE+RRKGLGVPGA+EA  A     R RS  GISL+ERVL+SLVVDHL SNG LQSLA+FLPESGLG  S
Sbjct:   45 EGGASLHDVKRALRDNFRATGVIDDVTARLRRQFVLELRRKGLGVPGAQEAAVAAGTCRRRRSPSGISLQERVLHSLVVDHLASNGLLQSLAVFLPESGLGGGS 148
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BLAST of mRNA_F-serratus_M_contig688.17939.1 vs. uniprot
Match: A0A835Z6Y0_9STRA (LisH domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Y0_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 2.140e-14
Identity = 46/98 (46.94%), Postives = 63/98 (64.29%), Query Frame = 0 
Query:   62 GDGEEGTTSLADMKRALRQNFLNTGVIDDVTARLRRQFILEVRRKGLGVPGAREAVAARCRSAGGISLRERVLNSLVVDHLTSNGFLQSLAIFLPESG 159
            G+GE+   SL +++  LR +F  TGV+ D+TARLRRQF+ E+ +   G P  +  VA R  S   + L +R L +LV D L + G LQSLA+FLPESG
Sbjct:   11 GEGED-ELSLHELRDRLRTSFRETGVLADITARLRRQFVAELVQHHHGPPAMKALVANRQISE--LPLTQRQLRNLVADFLRAQGLLQSLAVFLPESG 105
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BLAST of mRNA_F-serratus_M_contig688.17939.1 vs. uniprot
Match: A0A1Y1HLP5_KLENI (Dystonin n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HLP5_KLENI)

HSP 1 Score: 58.2 bits (139), Expect = 1.330e-6
Identity = 34/96 (35.42%), Postives = 54/96 (56.25%), Query Frame = 0 
Query:   65 EEGTTSLADMKRALRQNFLNTGVIDDVTARLRRQFILEVRRKGLGVPGAREAVAARCRSAGGISLRERVLNSLVVDHLTSNGFLQSLAIFLPESGL 160
            E G  S   +K  L  + L TGVID++  +LR Q + ++R           +V     SA   +L +R+LNSL +D+LTS G++ +L++F PE G+
Sbjct:    4 EGGQPSAEHLKSRLYSSLLETGVIDNLKTQLRTQILRQLR-------SVDSSVLDASPSAEPPALPQRILNSLFIDYLTSQGYVYTLSVFTPECGM 92
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig688.17939.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LGY8_ECTSI1.130e-3474.04LisH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835Z6Y0_9STRA2.140e-1446.94LisH domain-containing protein (Fragment) n=1 Tax=... [more]
A0A1Y1HLP5_KLENI1.330e-635.42Dystonin n=1 Tax=Klebsormidium nitens TaxID=105231... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006594LIS1 homology motifSMARTSM00667Lishcoord: 130..162
e-value: 0.0047
score: 26.1
IPR006594LIS1 homology motifPFAMPF16045LisH_2coord: 134..161
e-value: 1.1E-10
score: 40.4
IPR006594LIS1 homology motifPROSITEPS50896LISHcoord: 130..162
score: 9.19
NoneNo IPR availablePANTHERPTHR15431FGFR1 ONCOGENE PARTNER/LISH DOMAIN-CONTAINING PROTEINcoord: 70..161
NoneNo IPR availablePANTHERPTHR15431:SF14ORAL-FACIAL-DIGITAL SYNDROME 1 PROTEINcoord: 70..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig688contigF-serratus_M_contig688:266290..270850 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig688.17939.1mRNA_F-serratus_M_contig688.17939.1Fucus serratus malemRNAF-serratus_M_contig688 266290..270981 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig688.17939.1 ID=prot_F-serratus_M_contig688.17939.1|Name=mRNA_F-serratus_M_contig688.17939.1|organism=Fucus serratus male|type=polypeptide|length=183bp
MSAVDRAHSFVGGSPPDPVLGRLGTVEAWAKDVERRATGGHGWDTVTNRD
GRYGDTEGVTGGDGEEGTTSLADMKRALRQNFLNTGVIDDVTARLRRQFI
LEVRRKGLGVPGAREAVAARCRSAGGISLRERVLNSLVVDHLTSNGFLQS
LAIFLPESGLGDSSAVSTAASDGADGEAAGRLE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006594LisH