mRNA_F-serratus_M_contig685.17917.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig685.17917.1
Unique NamemRNA_F-serratus_M_contig685.17917.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig685.17917.1 vs. uniprot
Match: A0A6H5LEQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LEQ8_9PHAE)

HSP 1 Score: 305 bits (782), Expect = 3.500e-94
Identity = 158/268 (58.96%), Postives = 201/268 (75.00%), Query Frame = 2 
Query:  215 KMMWVLNIVAYIINATLVGISSYGVLGKPNDEVSADNPTLVTPDGWAFGIWGIVFLSELVFIVWGA--CNRESKVVNEGVGCWFAIACILQAIWSIVFALESFIFSAVLLCGIALSLAVGVASLSSFKVEAENFYFSIPFWTVHFPIGLHGGWTLAAALVNITVALKL-DSVSSEVAGLILAIVAASFMAAIAAIVFYDQIYLLAVAWAVAGIASKQDYRISQLGSPVADGVTEGLNALWIAVLCVGVLGVISTVRQRNRHVHEMEEK 1009
            +M+W++N++AY+INA +VG S++G  G  N EVS DNPT VTP+GWAF IWG++F  E VF++WGA   NR+S+VV EGVGCWFAIAC++QA WSIVFA E  I SA+LLC I LSL + V SLS  + E     F++PFW V+FPIGLHGGWTLAAA+VNI VAL+L     SE+A LIL++V A+  AA  ++VF++Q YLLAVAWA+AGIASKQDYR  QLG  ++DGV   L  LWI +LC+GVLG++  VRQ NR   E+  K
Sbjct:   10 RMLWLVNVLAYLINAVVVGGSNFGWWGATNAEVSDDNPTFVTPNGWAFSIWGVIFFFEAVFVIWGAFRSNRDSRVVQEGVGCWFAIACLIQAAWSIVFAQELLIVSAILLCLITLSLTLAVISLSLIQCEEGITLFTLPFWGVYFPIGLHGGWTLAAAIVNINVALELRGDTGSELAALILSLVGAALGAAFISLVFHNQPYLLAVAWAIAGIASKQDYRFVQLGKDLSDGVNVALQGLWIGLLCIGVLGILVGVRQMNRAEAEVIHK 277
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BLAST of mRNA_F-serratus_M_contig685.17917.1 vs. uniprot
Match: A0A835ZJ92_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ92_9STRA)

HSP 1 Score: 178 bits (452), Expect = 6.750e-47
Identity = 103/246 (41.87%), Postives = 149/246 (60.57%), Query Frame = 2 
Query:  233 NIVAYIINATLVGISSYGVLGKPNDEVSADNPTLVTPDGWAFGIWGIVFLSELVFIVWGACNRESK--VVNEGVGCWFAIACILQAIWSIVFALESFIFSAVLLCGIALSLAVGVASLSSFKVEAENFYFSIPFWTVHFPIGLHGGWTLAAALVNITVALKLDS-VSSEVAGLILAIVAASFMAAIAAIVFYDQIYLLAVAWAVAGI-ASKQDYRISQLGSPVADGVTEGLNALWIAVLCVGVLGV 958
            N+VA+ +N  +VG S++G+ GK N +VS   PTL TP  +AF IWG++F SE   +VW A  R +    V +G+G WFA AC+LQA+WSI FA E+   SAV+L GIA+ L    A+L+ F+     ++  +    +H PIGLH GWT AAALVNI +A    S V+++V   I+ + A     A+  +V  D  +L AV WA+A I A+   YR + LG  VA G+T  +  +W+ +L + V+ V
Sbjct:   37 NVVAFALNFAVVGASNFGLWGKTNKDVSDSIPTLTTPAAYAFSIWGLIFTSETALVVWQALPRNAGNLAVKQGLGPWFAAACVLQAVWSIAFAQEALTLSAVILVGIAVCLGKASANLAGFRARGAAWFDHL---ILHAPIGLHAGWTCAAALVNINLAAAQTSGVAAQVTAAIVTVFAXXXXXAVYGVVLLDPAFLAAVVWALAAIVANDGGYRDALLGKEVARGLTGAITVIWVGLLALQVVAV 279
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BLAST of mRNA_F-serratus_M_contig685.17917.1 vs. uniprot
Match: A0A7S2V2F8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2F8_9STRA)

HSP 1 Score: 142 bits (357), Expect = 6.560e-34
Identity = 98/244 (40.16%), Postives = 136/244 (55.74%), Query Frame = 2 
Query:  230 LNIVAYIINATLVGISSYGVLGKPNDEVSADNPTLVTPDGWAFG-IWGIVFLSELVFIVWGAC-NRESKVVNEGVGCWFAIACILQAIWSIVFALESFIFSAVLLCGIALSLAVGVASLSSFKVEAENFYFSIPFW----TVHFPIGLHGGWTLAAALVNITVALKLDSVSSEVAGLILAIVAASFMAAIAAIVFYDQI---YLLAVAWAVAGIASKQDYRISQLGSPVADGVTEGLNALWIAV 934
            +N+VA+  N  +  + S GV+GK N+EVS    T++TP GWAFG IW I+F+ E  F++W             G+G WFA ACILQ  W I FA E  + SAVLL GIA SLA   + L+  +  AE    S   W     V  P+GLHGGWTLAA LVN+++A+ ++  S++ A L++A V+   +AA+  +V   Q+   Y LAVAW +  I   Q     +LG   A  +     AL I +
Sbjct:   23 VNVVAFCFNVVITFLPS-GVIGKSNEEVSNQYETIITPAGWAFGPIWAIIFILEAAFVIWQCLPTARGNPWILGIGFWFAAACILQGCWGIAFAAEKIVASAVLLLGIAASLAFACSELTKLRKSAEAPELS---WGRYVVVWLPLGLHGGWTLAAGLVNVSLAVYVEGASAQ-AQLVVAAVSLG-IAAVGGLVASRQMHAAYSLAVAWGLLAIGLNQATTRERLGEDTAQALEYTSVALAIVL 260
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BLAST of mRNA_F-serratus_M_contig685.17917.1 vs. uniprot
Match: A0A7S2LGL1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LGL1_9STRA)

HSP 1 Score: 128 bits (321), Expect = 6.420e-29
Identity = 94/258 (36.43%), Postives = 147/258 (56.98%), Query Frame = 2 
Query:  227 VLNIVAYIINATLV-GISSYGVLGKPND-EVSADNPTLVTPDGWAFGIWGIVFLSELVFIVWGACNRESK---VVNEGVGCWFAIACILQAIWSIVFALESFIFSAVLLCGIALSLAVGVASLSSFKVEAENFYFSIPFWTVHFPIGLHGGWTLAAALVNITVALKLDSV--SSEVAGLILAIVAASFMAAIAAIVFYDQIYLLAV--AWAVAGIASKQDYRISQLGSPVADGVTEGLN-------ALWIAVLCVGVL 952
            +LN VAY++N  +  GI   G+ G PN+ E+S   PTL+TP GWAF IW I+F+S+ VFIV   C ++ +   +V +GVG W+   CI QA WSI F  E    S VL+  I +SL VG+  +S +K++  NF+    +  + FP  +H GW +AA  +NI+V L  + V  +S+++  IL++ A   +A    +      Y++AV  AWA AGI+S+     +++       VT+ L        A+ +A+LC+ V+
Sbjct:   46 ILNAVAYVVNLIVTYGIGVLGIGGLPNNSELSDKYPTLITPAGWAFSIWAIIFISQAVFIV-AQCFKKYRAHPLVQDGVGYWYVGTCISQAGWSIAFGYEVIWLSLVLMIAILISL-VGLL-VSQYKLKPGNFW---DYVILCFPFAIHCGWIIAATFLNISVLLVSEDVDATSQLSAAILSVAALLSLAVYTLLALSSPEYVVAVVLAWANAGISSELSDPPTEIREHFDSVVTDALENSVTWAYAIILAILCITVI 297
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BLAST of mRNA_F-serratus_M_contig685.17917.1 vs. uniprot
Match: A0A7S3UTX0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTX0_HETAK)

HSP 1 Score: 124 bits (312), Expect = 6.100e-28
Identity = 83/257 (32.30%), Postives = 147/257 (57.20%), Query Frame = 2 
Query:  233 NIVAYIINATLV-GISSYGVLGKPNDEVSADNPTLVTPDGWAFGIWGIVFLSELVFIVWGAC-NRESKVVNEGVGCWFAIACILQAIWSIVFALESFIFSAVLLCGIALSLAVGVASLSSFKVEAENFYFSIPFWTVHFPIGLHGGWTLAAALVNITVALKLDSVSSEVAGLILAIVAASFMAAIAAI--VFYDQI-YLLAVAWAVAGIASKQDYRISQLGSPVADGVTEGLNALWIAVLCVGVLGVISTVRQRNRH 988
            N++A+I+N +L  G + +G  GK  +E+S +  T++TP GWAF IWG++F  E VF  W    + ++ ++NE VG ++  AC+ Q+ W++  A + F+ SA++L GIA+SLA+    ++  ++          ++ V F  GLHGGWT  A L++  +A   + VS +   L++AI++ + + A +    +F D + Y LA+ WA+ GI+S+Q      LG  +A+ +   ++++  AV    +  V   +R R  H
Sbjct:   21 NVLAFILNCSLTFGNNGFGY-GKSIEEISDEYQTIITPPGWAFSIWGVIFALEFVFTAWQLFQSSDNLILNEVVGFFWVSACLFQSAWNLTIAAQLFVVSALVLAGIAISLAIICLRITPKEMNQHETV--AEYFLVRFSFGLHGGWTCVATLLSFNLAAVANGVSPK-GQLVVAIISLAVVVAASLYFGMFKDNLSYSLAICWALFGISSEQGQTSMILGPEIANHIR--ISSMVCAVSITLLTCVCEFIRVRKVH 271
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BLAST of mRNA_F-serratus_M_contig685.17917.1 vs. uniprot
Match: A0A7S1A394_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A394_NOCSC)

HSP 1 Score: 106 bits (265), Expect = 1.290e-21
Identity = 87/264 (32.95%), Postives = 125/264 (47.35%), Query Frame = 2 
Query:  233 NIVAYIINATLVGISSYGVLGKPNDEVSADNPTLVTPDGWAFGIWGIVFLSELVFIVWGACNR--ESKVVNEGVGCWFAIACILQAIWSIVFALESFIFSAVLLCGIALSLAVGVASLSSFKVEAENFYFSIP--FWTVHFPIGLHGGWTLAAALVNITVALKLDSVSSEVAGLILAIVAASFMAAIAAIVFY-------DQIYLLAVAWAVAGIASKQDYRISQLGSPV-------ADGVTEGLNALWIAVLCVGVLGVISTV 970
            NI  +++N  +  +S  GV G  N  +SA   TLVTP GWAF IWG++F+ E +F V  A      + VV E V  W+  AC+ Q++W+ +FA E       ++ G  L++   VASL    + A+      P  FW +  P  LH GW LAA+ VN  V +     S    G+++A    S +  +  IV Y       D I     AWA   I S+  +  + L SP        ++  TE L    IA  CV V  ++S V
Sbjct:   13 NITVFLVNMFVTYVSLTGVFGPNNQTLSAKYQTLVTPAGWAFSIWGVIFIWEAIFCVAQASTSALRTSVVVEAVTPWWIAACVSQSLWTPLFAQE-------IIWGSLLAMLAIVASLMGLIICADRHLSLTPQEFWLLRAPFSLHAGWILAASFVNANVFVDFLRASP---GVLVAAGVLSLILFLVIIVVYQFLAPKRDAIICFVAAWACIAIFSELGHP-ALLNSPTRYNPHVFSESTTEQLR---IAACCVSVAALLSGV 262
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BLAST of mRNA_F-serratus_M_contig685.17917.1 vs. uniprot
Match: A0A7S1ZTZ5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZTZ5_TRICV)

HSP 1 Score: 105 bits (261), Expect = 4.240e-21
Identity = 85/275 (30.91%), Postives = 135/275 (49.09%), Query Frame = 2 
Query:  230 LNIVAYIINATLVGISSY--GVLGKPNDEVSADNPTLVTPDGWAFGIWGIVFLSELVFIVWGACN--RESKVVNEGVGCWFAIACILQAIWSIVFALESFIFSAVLLCGIALSLAVGVASLSSFKVEAENFYFSIPFWTVHFPIGLHGGWTLAAALVNITVALKLDSVSSEVAGLILAI-VAASFMAAIAAIVF---YDQIYLLAVAWAVAGI-----ASKQDYRISQLGSPVADGVTEGLNALWIAVLCVGVLGVISTVRQRNRHVHEMEEKGL 1015
            LN+VAY+ N   V I      V  K N +VSA   T+VTP GWAF IWGI+F ++ +F V       R    V +GV  W+A+    Q +W+ VFA E    S V++  I  SL   + S S  +  ++N      FW + FP  +H GW +AA +VNI + L    VS  +  ++ A+ + A    A++A+VF    + +  + +AW   GI     A KQ   + +  +   +    G   + + +L   ++ VIS  R++   +    E+G+
Sbjct:   19 LNVVAYVANLFFVNIIMLFDKVDLKSNADVSAKYQTIVTPVGWAFSIWGIIFAAQALFTVVQLLPTFRSLPQVQQGVKYWYALVSAFQIVWTFVFACEMIWISCVVMVFILSSLCALLQSQS--RAASDNT--RKEFWLLRFPFQIHAGWIIAATVVNINLVLVASDVSPVIQAMVAALSLVAILCIALSALVFPTSTNVVIPVTLAWGAGGIWAELNAPKQSI-LDKFSNHTINVFKIGAACICLILLFAVLIKVISDWREKRHEIGRENEEGV 288
[Close]
BLAST of mRNA_F-serratus_M_contig685.17917.1 vs. uniprot
Match: A0A7S2MNG6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MNG6_9STRA)

HSP 1 Score: 104 bits (259), Expect = 6.380e-21
Identity = 76/251 (30.28%), Postives = 118/251 (47.01%), Query Frame = 2 
Query:  230 LNIVAYIINATLVGISSYGVLGKPNDEVSADNPTLVTPDGWAFGIWGIVFLSELVFIVWGAC--NRESKVVNEGVGCWFAIACILQAIWSIVFALESFIFSAVLLCGIALSLAVGVASLSSFKVEAENFYFSIPFWTVHFPIGLHGGWTLAAALVNITVALKLDSVSSEVAGLILAIVAASFMAAIAAIVFY-----DQIYLLAVAWAVAGIASKQDYRISQLGSPVADGVTEGLNALWIAVLCVGVLGVI 961
            LN V Y++N     I+  GV G+ N  +SA   T++TP GWAF IWG++F  + +F+V      +R   +V EGVG W+   CI Q  W+  F+ E    S + +  I L+L   + + S    +  N      FW + FP  +H GW + A  VN+ V +   +  S    +  AIV+ +++A  +  V +     D    L +AWA   IA +    I ++      G    + A+     C  V GVI
Sbjct:   15 LNAVGYVLNFV---ITFAGVGGENNATISAKYQTIITPAGWAFSIWGLIFTMQAIFVVLQLLPDHRRLPLVKEGVGYWYFGTCIFQVAWTCAFSYEVLWLSVLFMALILLTLIAIIKNQSKIPPDGTN----QDFWLLRFPFSIHCGWIMVAFAVNVNVLVVASNAKSRTQ-VEWAIVSLAYIAFSSIYVLFCKRTTDTTMALVIAWAALAIAIELTDPIDKIDDTFGGGTITTIQAI-----CATVCGVI 252
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BLAST of mRNA_F-serratus_M_contig685.17917.1 vs. uniprot
Match: A0A0G4FPA6_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FPA6_9ALVE)

HSP 1 Score: 101 bits (252), Expect = 8.270e-20
Identity = 61/161 (37.89%), Postives = 93/161 (57.76%), Query Frame = 2 
Query:  233 NIVAYIINATLVGISSYGVLGKPNDEVSADNPTLVTPDGWAFGIWGIVFLSELVFIVWGACN--RESKVVNEGVGCWFAIACILQAIWSIVFALESFIFSAVLLCGIALSLAVGVASLSSFKV-----EAENFYFSI-PFWTVHFPIGLHGGWTLAAALVN 691
            N+VA+I+NA LV +S+ G+ G  N E SA   T++TP G+AF IWG+++++E ++ ++        SK+++EGV  W     + Q +W+I FA +  I SAVLL  I +SL   V SL  F+        E    S+  +W    P G+H GW  AAA++N
Sbjct:    9 NLVAFILNAVLVNLSNTGIYGPTNAEQSAKYSTVITPAGYAFSIWGLIYITEGIWAIYQMFPPVSRSKLLSEGVSFWQISMSVFQVLWTIAFARDWIIASAVLLLMIWVSLVGLVVSLFRFRTGEVDKSGEKREISLLNYWIFCVPFGIHLGWVTAAAILN 169
[Close]
BLAST of mRNA_F-serratus_M_contig685.17917.1 vs. uniprot
Match: A0A6T9FPT0_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A6T9FPT0_ALECA)

HSP 1 Score: 99.8 bits (247), Expect = 2.360e-19
Identity = 84/262 (32.06%), Postives = 132/262 (50.38%), Query Frame = 2 
Query:  230 LNIVAYIINATLVGISSYGVLGKPNDEVSADNPTLVTPDGWAFGIWGIVFLSELVFIVWGAC-NRESKVVNEGVGCWFAIACILQAIWSIVFALESFIFSAVLLCGIALSLAVGVASLSSFKVEAENFYFSIPFWTVHFPIGLHGGWTLAAALVNITVALKLDSVSSEVAGLILAIVAASFMAAIAAIVFY-----DQIYLLAVAWAVAGIASK-QDYRI----SQLGSPVADGVT-EGLN--ALWIAVLCVGVLGVISTVR 973
            +N+V YI+N  +  +S  G+ G  N ++S    +LVTP GWAF IWG +F+ E V  V        +  V+  V  ++  AC+ Q  W++ FA E+ + S +L+ GI + L     S     + A+ F      W +  P+ LH GW + A+ VN  V L +  ++   + L +AI A   +A +AA+  +     D I  L VAWA+  + S+ Q  R     S+    V D V  EG+   AL ++V CVG+  + S +R
Sbjct:   12 MNLVGYIVNFCVTWLSLTGIFGPTNGDLSKKYQSLVTPAGWAFSIWGPIFIWEGVLTVAQMLPGLRASHVSRSVAPFWLFACLCQTGWTLAFAREAMVLSELLMLGILVGLMGAAFSADLEDITAKEF------WLLRGPLSLHLGWIICASAVNTNV-LAVSHLAGPGSMLAVAIAALVAIAVLAALYAFAAPKPDCIPSLVVAWALLAVDSELQSARNLQDPSKFNPYVWDAVVLEGMRGAALALSVACVGLAVLASVLR 266
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig685.17917.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LEQ8_9PHAE3.500e-9458.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZJ92_9STRA6.750e-4741.87Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V2F8_9STRA6.560e-3440.16Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2LGL1_9STRA6.420e-2936.43Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S3UTX0_HETAK6.100e-2832.30Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1A394_NOCSC1.290e-2132.95Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A7S1ZTZ5_TRICV4.240e-2130.91Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2MNG6_9STRA6.380e-2130.28Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A0G4FPA6_9ALVE8.270e-2037.89Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A6T9FPT0_ALECA2.360e-1932.06Hypothetical protein n=1 Tax=Alexandrium catenella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig685contigF-serratus_M_contig685:222882..230394 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score85.9
Seed ortholog evalue3.3e-14
Seed eggNOG ortholog1227739.Hsw_0415
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.ATPase, P-type transporting, HAD superfamily, subfamily IC
EggNOG OGs47QJS@768503,4NHBI@976,COG0474@1,COG0474@2
COG Functional cat.P
Best tax levelCytophagia
Best eggNOG OGNA|NA|NA
Exons5
Model size2389
Cds size849
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932096.158784-UTR-F-serratus_M_contig685:222881..2242041622932096.158784-UTR-F-serratus_M_contig685:222881..224204Fucus serratus maleUTRF-serratus_M_contig685 222882..224204 -
1690964144.997201-UTR-F-serratus_M_contig685:222881..2242041690964144.997201-UTR-F-serratus_M_contig685:222881..224204Fucus serratus maleUTRF-serratus_M_contig685 222882..224204 -
1622932096.254403-UTR-F-serratus_M_contig685:226031..2261241622932096.254403-UTR-F-serratus_M_contig685:226031..226124Fucus serratus maleUTRF-serratus_M_contig685 226032..226124 -
1690964145.0667522-UTR-F-serratus_M_contig685:226031..2261241690964145.0667522-UTR-F-serratus_M_contig685:226031..226124Fucus serratus maleUTRF-serratus_M_contig685 226032..226124 -
1622932096.2759721-UTR-F-serratus_M_contig685:230270..2303941622932096.2759721-UTR-F-serratus_M_contig685:230270..230394Fucus serratus maleUTRF-serratus_M_contig685 230271..230394 -
1690964145.0783336-UTR-F-serratus_M_contig685:230270..2303941690964145.0783336-UTR-F-serratus_M_contig685:230270..230394Fucus serratus maleUTRF-serratus_M_contig685 230271..230394 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932096.1821265-CDS-F-serratus_M_contig685:224204..2245931622932096.1821265-CDS-F-serratus_M_contig685:224204..224593Fucus serratus maleCDSF-serratus_M_contig685 224205..224593 -
1690964145.0113401-CDS-F-serratus_M_contig685:224204..2245931690964145.0113401-CDS-F-serratus_M_contig685:224204..224593Fucus serratus maleCDSF-serratus_M_contig685 224205..224593 -
1622932096.2018814-CDS-F-serratus_M_contig685:224878..2250741622932096.2018814-CDS-F-serratus_M_contig685:224878..225074Fucus serratus maleCDSF-serratus_M_contig685 224879..225074 -
1690964145.029128-CDS-F-serratus_M_contig685:224878..2250741690964145.029128-CDS-F-serratus_M_contig685:224878..225074Fucus serratus maleCDSF-serratus_M_contig685 224879..225074 -
1622932096.2209024-CDS-F-serratus_M_contig685:225474..2256071622932096.2209024-CDS-F-serratus_M_contig685:225474..225607Fucus serratus maleCDSF-serratus_M_contig685 225475..225607 -
1690964145.043899-CDS-F-serratus_M_contig685:225474..2256071690964145.043899-CDS-F-serratus_M_contig685:225474..225607Fucus serratus maleCDSF-serratus_M_contig685 225475..225607 -
1622932096.2408504-CDS-F-serratus_M_contig685:225900..2260311622932096.2408504-CDS-F-serratus_M_contig685:225900..226031Fucus serratus maleCDSF-serratus_M_contig685 225901..226031 -
1690964145.0560987-CDS-F-serratus_M_contig685:225900..2260311690964145.0560987-CDS-F-serratus_M_contig685:225900..226031Fucus serratus maleCDSF-serratus_M_contig685 225901..226031 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig685.17917.1prot_F-serratus_M_contig685.17917.1Fucus serratus malepolypeptideF-serratus_M_contig685 224205..226031 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig685.17917.1

>prot_F-serratus_M_contig685.17917.1 ID=prot_F-serratus_M_contig685.17917.1|Name=mRNA_F-serratus_M_contig685.17917.1|organism=Fucus serratus male|type=polypeptide|length=283bp
MMWVLNIVAYIINATLVGISSYGVLGKPNDEVSADNPTLVTPDGWAFGIW
GIVFLSELVFIVWGACNRESKVVNEGVGCWFAIACILQAIWSIVFALESF
IFSAVLLCGIALSLAVGVASLSSFKVEAENFYFSIPFWTVHFPIGLHGGW
TLAAALVNITVALKLDSVSSEVAGLILAIVAASFMAAIAAIVFYDQIYLL
AVAWAVAGIASKQDYRISQLGSPVADGVTEGLNALWIAVLCVGVLGVIST
VRQRNRHVHEMEEKGLATRRTGDGATQAMISS*
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mRNA from alignment at F-serratus_M_contig685:222882..230394-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig685.17917.1 ID=mRNA_F-serratus_M_contig685.17917.1|Name=mRNA_F-serratus_M_contig685.17917.1|organism=Fucus serratus male|type=mRNA|length=7513bp|location=Sequence derived from alignment at F-serratus_M_contig685:222882..230394- (Fucus serratus male)
GTTTTACCGAAATCAGGTCGAACTCACTATCTGACGACAAGTTCGCCTTT
CCTTGCCAAACTAGACAGCTCGCGACCGAGGGTACGGCAACAACTGTCAT
CATTGTGGTGAAGTATTTGAAAAGGTGAGTAAAGACGCCGCGGTGAATAA
AGAAGGGGATCATGTAATTTATCGTCTATAAGTGGATGTGATCGCCCGAC
GTGTCGTTGAACTTGAACTTACTAGGTTTTAGCGTGCCCTTTGATCCTGA
GAGCGTCGCTTAGTCTGTCATTGTTTCTCTCTCCTAAAGAAATGGTCTTC
ACTCGCCGAGTTAGCGGCGAACAGCTGGTACGATACGATGGAAGCCGGTG
ATTGTCGACAACTCAAAAGCAATTGCCGTTCTCGTCTGTCAGATGCCACC
CAACAGCCACGCACGCCGCTGCCTCTACATGTATGGCGGTCTCTGATTCA
TCGCATTCGGAATTACAGTATCAGTATTAGTAGTACTCGATAATCCAAAC
GTTGACCTGTACAGCTGTTCTCACCAACGAGTAGTGAAAATATTTGACAT
TTTTTCCCTCCCATATATACATATGTACCAGTATGTATATTATCACACAT
GACAAGAGTAATGATCAACCGACTAAGGTTGCCAATCCTGGCCGCGTTCG
CGCCTGAGAATTTGGTCTCGCGAGACGGGTTCGGCAGTCCTGGCCCTCCT
GCGTCAGCTTGCTTATCTCCATAATCGTGCTGAATCTGGTGCTTACTCAC
GGGATTCCTCCCGAGTTTCGCAGCAGCGTCCATACGTATGCTGAGAAGGT
TTAGATGCGTTCACATTTTGTATCTCGCAGGGAACTGGACAGTAAAATAT
TTTCAAAATTCGGCGTGTGATGCACGAGGCACCAATAAATCAATGGGGGT
TCGGGATAGTATAGTTTGGGAACCGGGAGGAAAGCATAACTTGGGATGTG
AACATATATGGAGTTTAGGGGTTTTCAGGAAAAAATCTGAACGCATCTAG
ACCTTTTGAGCATCCCCCAGTCAGAGGGGAAAAATGTCAAAATGGTGAAC
AAAACAAAACTACAGGCACGTTACGTACCGTTCCTGGTACGCACTCTATA
ACGCTGTGTTTTGATCCAGGAGGAAAATATGAGAATTCTTGCGTTGTATC
GCCGTTACTTTCAACATGCCCACTTCATAACCAATAGTGGGTGTGGGAAA
GAAAGGCGTATATTAATTGGTCCATAGTGACCTGCGAAGGCAGCACTCGT
TCGAAACTACCTTGAGGTATGCTGGCCCTATGCCGGCGGATTCTCGGCAG
TGAACGCCATCGGTACGCAATTGCGTGACCCGATTTACTCGGGACTGACC
CGATGGCGTATGGCGGTTTAATATTAATATATGGACGCCGCCGCGGAACT
CGGGAGGAATCCCGTAAGTAAGCACCAGATTCAGCCTGAGTATGGAGATG
AGCAGGCTGACGCGGGACGGGACTGCCGAAACCGTCTCGCGAGACCAAAT
TCCCAGGCGCGAACGCGGACAGGGGAATATTATTTTCTCTGTTTAGCTGA
CCACGAGCAGGATTGGCAACCTTAACAGGTTGATCCATACTCTTGCTATA
TGTGTGACCATACATGATAGCATGCAATACCCTCCGTTCTCTTCCAGGAC
GACTGCCCACGCCAGAGTCCAGCTTCATTAACTTTGACATAATACACCTG
ATGAGGGAAGGATGACTAGCCCAAAGGCCCCAATTCGTCACAACAACGCT
CAAAAGGTCTAGGTGCTGTTCTGATTTTCTTTAAACGTCTAGATGCGTTG
AGATTTTTCTTAGCATACATTCTCGAATTTTGCTGTACTTGCTTCAAATC
GCGAGGAGCTTTGCCCGGGGTACAAAAACCAGATACAGAAGTAGTTTTTG
TTCAAGTTCTTTCCCTATCTGAGGTTTACAGGCCCTGTGCCAGCGGACTC
TAGCCAGTGAACGCCATTGTTACGCAATTACGGGACCCGATAAACTCTAT
TATAGACTGACTTAATGGCGTATGGCGGTTTAATATAAATATACGGCCGC
CGCCGCTGAACTCGAGAGTAGGAGCGTGGAGATGAGCAGGCTGACGACTG
CCGAACCCGCACGAGCAGGATTGGCAACCTTACCAGGTTGATCCATACCT
GCTACGCGTGTGACCATACATTGTGTGCTCTTTTGTTTTCCCGATTTATG
ACAAAAACACAGCACATGACAGGGGCAATGAACGACACACACACACTCTC
TCTAAATGATACTACCATACCATGTGTCGACTCACGACTACAAGTCAGCT
AGCTCTGCGACGGTACGTATACCGCCTATGGTCCTTCCAGACAAATAGCC
TCCCTCAGTAATTTCGGCAGGCACTTCCTCACGAATCCGACCAATCATGC
AAGAGAGTTTGAACTTAACCATACCAGTTGTATGCTGTATGTACGTACCC
ATGAGGCGGTCCATCAGGACACATTTTTTCTCAACAGACAGTGCTGGTAC
CTCAAGAGTGAAGGTGACCTACCTTATATTTATATCATGCTCGTACGCCA
GCACGAGTAGATGAGTATGGATTAATTGGGTAAGGTTGCCAATCCTGCAC
GTGGTCAGCTAAACAGTGAAAATGGATATTTTCCTGTCCGTGTTCGCGCC
TGAGAATTTGTCGCGCGAGACGGTTTCGGCAGTCCCGTCCCGCATCGTAT
CAACCACTGACTGTCGTACTCTTATGACAGTACTCTGTATTTCCAAAACG
TGACGTACGAGCTAATCGCCATCTCAAGAAGACTTTTTCTTTAAAGACTC
CATTAGAGCCGTTTCAATATTCTCAAAAGTTTGGGGGAAAGGTCTCGACG
CGTCGTTTTGCTTGTCTGGAGTCTTTTCGAAAGACTTCCACCACGATCAC
CGATAACAGCTGTAGCTGATTTAGACCTCAGATAGGTATGCATACAGCTT
CGTCTCCGATGATTGCCTGACGCAAGCTCCGCCTAACTTGCCTACATGAT
GGACAGGGGCTAGTGTAGTTTTGATCCTATTGAGATGGACCCCCCAAAAA
AATTGCGAACGTGGGTACTTTCGTTCTTATAAACTGTATGTACACAGCTC
GACCTTCAACGCCTTAGACACTGCTACAGAATTGTTGTGCTGTTGTCTAA
TGTCTGTTAATAGTTAATAGCGATGATATCAAACTTTCGGTCTTCGGGTA
GACATGTTTGAATCAAGCCCGCAGCGAGGCTAGGACATTGGTACTTGGTA
CGTACATCTTGTAACCTCCTCGCTGTCAATCTGTTGATATGTAGGCGAGG
TGTAAGGTGACCCCACAATCCCGTTTTCTAACTTTTGGGGATGTATGATC
ATTACTTCAAGCAGAGATTGATCAACTGTGTAAGGTTAGGTTGCCAATCC
TGCTGGTGGTAATATTTTCCTGTTCCCGTTCGCGCCGGAGAATAAATATG
GTCTCGCAAAACGGGTTCGGCCCGTCACGTCCTCCGTAATCCTCCGATGG
CGTTCACTGCCGAGAGTCCGCCGGCACAGGGCCTGTAGTCCTTATGGTAG
ATCCCGTAACGAGTGCTGCCTTCTCAGGTATCAACATAAACGAATTAATG
TGCACTTCTCTTTTTTTCCCTACCCACTATTAATATTAATAATCGTATTT
AATGGGCATTTGTCACAAACTCAATCGGTGATACCTTACCCAGAGCCCTC
TTGAGCGCATTGTCCGTTGTCAGTCGTCAAAATACATTTCCACACCACAG
GCCACTCACGCGACGTGCTTTTTCTTATTTTAACATTCGTCGCCCGAGTG
GTCTAGTAGGTAACCTGCATACCTGCTAGTGCGGAAGTCGTGAGTTCGAT
TCTTAGCTTCAGCAGAATTTGTGTTTTTTCTTTCGTAACGGAAAGCGTGG
GAACGTGAGTAAGTAAAATTCAACCATTGGTTGACGAGTTGTAAGAGTGC
TGTACTTGCATCGCGATAAAAATGGCAAGGCGTGAACCGGAGAGAGATGG
GAAGATCCTTTGTGACCACAGGCAGGATGGTAATTAGAGGTCCATCGGCT
ATAAGTAAAAAAAATGTGCGGCTTCGTCATGCTCATGCTCTGGATTGGCG
AGGTCTCAACTTCCGCTACTTTTCCCCGTTCCCGCATGACTCCCTTCCCT
TCCCTTCTCTTCCAAAACAGGAACACATGACTAGCCGCCGTTGGAGAAAG
TCGTCTTACAAACGCGCCTCAATGCTCGCTTTGCTTTTCTGTGCGTTACC
TGGATGCTTGTCTCCGTCAGGTACTCGGTCGTTTGTGCGGGTTCTACTTG
GTGTAAAAAGTCCAGACTCGCTGCTCACGTCAGGTCGAGGCCGTTGCCCG
CGGTGTGGTGAAGATGATGTGGGTGCTGAATATCGTGGCGTACATAATTA
ACGCCACGTTGGTCGGCATAAGCTCGTACGGAGTTCTGGGGAAGCCCAAC
GACGAAGTCTCTGCTGACAACCCGACGTTGGTCACCCCCGACGGGTGAGA
CGATTCAGCATCAGATTGCCCAGAGATCTACGGACTAGCTGTGCATTAAC
TTCTGACAGTACCCATGCGATCTTGTGCGAGAGAAGACCTAATGTTTCAA
TTTACAATCGAGTGCTTTGGTAGGTTAACACCGTCGTGGTGGCTTAGCTT
GGGCAACCCGCCACGTTCGCTTCGGAAAAAAATGCGAGACGGTCATGTCC
GACGCGTACATTCGCCCTCGCGACTTTGGCCCTAATGGCGTAAACTTTGT
GCCCCCTGTCCTAAATGCAATTGTACTCAAACCCCAGCTGGGCGTTCGGC
ATTTGGGGCATAGTCTTCCTGTCGGAATTGGTTTTCATCGTGTGGGGGGC
TTGCAACCGAGAAAGTAAAGTCGTCAACGAAGGGGTCGGCTGTTGGTTCG
CCATTGCGTGCATCCTTCAGGTGCGTACTGCTGCTGCTACGAAGCGCCTG
TCCCTCGGAAGCTTACTGCCAACACCATTTCATTGATGTGATAACATTGT
ATCGGTTATGGCGATATCCTATATTATATACAACGCTTGCCGGCCGCGCT
CGCACGTGCGTTGAGGCTGACTTTGTCGGAAGAGGTTTTCTGCTTGCGCT
GACGCGTGAAGAATCCGGTATGATGGCGCAGGCGCCCATCACGCCCGACT
GGATCACCCCCTAATCACACTTGCTGCATGCCGCCTTGCGGACTCGAACA
TGAAGCGCTTCAGACCTCGAAGGTCCACACCTCATGGCGCCATTCCTTCA
AGCGCTACCACTCTTGTGCCCTCCCTCCCCACTAACTCTTCCACTTTTGG
TCGTTATCGCCTCTGCGCAGGCGATCTGGAGTATTGTGTTCGCCCTGGAG
AGCTTTATTTTCAGTGCGGTGCTACTTTGCGGCATCGCGTTGTCCCTCGC
AGTGGGTGTAGCGAGCCTGAGCTCGTTCAAGGTCGAAGCAGAAAACTTTT
ACTTTTCGATCCCCTTCTGGACTGTTCATTTCCCCATCGGTCTGCACGGA
GGATGGACCCTAGCTGGTGAGTCAGAGTAGCCAGATACGTAAACCTTGTC
CTTCAAAATATTTCATCTCGGGGTAACGTGATGGGCTCGCCGCCCTTACC
CTCGTGTAGCGAGGCAGCGGCTTATCTAGGGCTAGGGCACTCAGCGCAGT
GGTATTTTTGAAGCCAAAACGTTCTCTTTAAACCTTTTTTTATCGCTATC
GTTTTGGCACGCGCTTTCCGGCGTGCGCACGTTCTCTCGTGCCAAGACGT
CGACTTGAACATGCATTCTGTTCTCTTTCCCGACCCAATCATCCGTTACA
GCTGCTCTCGTGAATATCACTGTTGCGCTGAAGTTGGACAGCGTCAGCTC
TGAGGTTGCGGGTTTGATATTAGCGATTGTGGCAGCAAGCTTCATGGCCG
CCATCGCCGCGATCGTCTTCTACGACCAGATCTACCTACTAGCGGTTGCG
TGGGCCGTCGCCGGTATTGCCTCAAAGCAGGACTATCGCATCTCGCAACT
GGGATCGCCCGTGGCGGACGGGGTGACCGAAGGGTTGAACGCGCTGTGGA
TCGCGGTACTTTGCGTCGGGGTGCTGGGGGTCATATCTACCGTGAGGCAG
AGGAACAGGCATGTGCACGAGATGGAAGAGAAAGGGTTGGCGACGAGGAG
GACGGGGGACGGCGCAACTCAGGCGATGATCTCGTCGTGAGGAAGTGTGC
AGTGAAGTGATGTGGAGTTTATTTTATCGGGGTAGGAAAGTCTAGGGTGG
ATTATCCTTTTGTGTGTTTGGTATTGGGGGAGGGATATTCGTAGTGGAAA
AGAGAATGTTGAATGTTGCGTCGGTGTGGCACCTTTGTATGAGTCCGTTG
CTTGTTGGAGTCGACATTGCGTGCCTCTCGCTACAGGGTTCAAGTATCAT
CCGACGTATCATCCGACGCGACTGTTCACAGGTTTTCGTTGAAACTCATC
CGCGTTTCTGCAAGTTTTACCAACGAAGCAGATGAAATTAACACGTGTAC
ATCAGAGGGCGGCATCTGGATCGTAGGCTACAGCGGCCAGCGCACGCTCG
CAAACGGAAGCTGGCTTCGAGATAGACGTGATCGCTGTCTTCTTTTGTTC
GTGCTTTAAATGCTTTGCCCTTCGTCCTTTTTCTTGTGTACATTTTGTTC
GATGCAGTTGCATATTTAACCTTCACCTCTTTCGTCCTTCGGCGCGGCGC
CACCAGTGAGAAAGTTTGGCAAAATCTAATCGCGCGTTTCGTCCGGCGCG
ATGTGTCGGAATGCGGAAAGTCTCCGCCGCGGCGCCTGTTTTATTCGCGG
TCGCCGCCGTTGAAAGTAAAAAATAGTAAGAGGGAGCGGAAAACAATGTC
TTCGGTGCTCTCTAGTAAGTAATTTTTTTATTGTAACGTGTGTTGGACGG
CTCGGCTAGATTGTTTCTTCTGTGTTTTTATTCATGACGAGTGCTGTAAC
TAAATTATACGTGTATTAGATTGCTGTGGTAGATTCCATCATCTATATAA
GGCGTCCTGGTGAGCAAGGTCGTTTTCGAGGCGTGAGTGTGGTTCGAGGG
ATTGTTTTGGTTCGGGCGGGCGGGCGATGGCAGAAAGCCATCGACGCGAC
CTCCAATGGATGGAGATGTACAACAGACGTCGCTGTGCACGGAACCCGGT
CGGGTATAACGTAGGGAAGCCATGAGCCGACACCAACCCTCTTTTTCGGT
TTGAGCGGTCTGTTCATTGCAATGGTCTGCAAAGCTTCTAGAAAGCAAGT
TTCTTTGTAATTTGTACCTTGTCCACCATAACAATTTCCCTTCACTATTC
CTATGTCCATGGCTTGAATATCTCCTTGGTCGACACCCATTCGATCCTAC
AATAGACTCAATGGATCAAATTGAGCTGAAATCCAATCTCGTCGTGGCTT
TTGTCTTGGTTCTCTTAAGAAAAAATTGAACGCATTCTAGACCTTTTGAG
CATCCCCCAGTCAGGGGGGGAAACGTCAAAACCTTGAATTGAATTGAATT
CTCACATAAGCTG
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Coding sequence (CDS) from alignment at F-serratus_M_contig685:222882..230394-

>mRNA_F-serratus_M_contig685.17917.1 ID=mRNA_F-serratus_M_contig685.17917.1|Name=mRNA_F-serratus_M_contig685.17917.1|organism=Fucus serratus male|type=CDS|length=1698bp|location=Sequence derived from alignment at F-serratus_M_contig685:222882..230394- (Fucus serratus male)
ATGATGTGGGTGCTGAATATCGTGGCGTACATAATTAACGCCACGTTGGT
CGGCATAAGCTCGTACGGAGTTCTGGGGAAGCCCAACGACGAAGTCTCTG
CTGACAACCCGACGTTGGTCACCCCCGACGGATGATGTGGGTGCTGAATA
TCGTGGCGTACATAATTAACGCCACGTTGGTCGGCATAAGCTCGTACGGA
GTTCTGGGGAAGCCCAACGACGAAGTCTCTGCTGACAACCCGACGTTGGT
CACCCCCGACGGCTGGGCGTTCGGCATTTGGGGCATAGTCTTCCTGTCGG
AATTGGTTTTCATCGTGTGGGGGGCTTGCAACCGAGAAAGTAAAGTCGTC
AACGAAGGGGTCGGCTGTTGGTTCGCCATTGCGTGCATCCTTCAGCTGGG
CGTTCGGCATTTGGGGCATAGTCTTCCTGTCGGAATTGGTTTTCATCGTG
TGGGGGGCTTGCAACCGAGAAAGTAAAGTCGTCAACGAAGGGGTCGGCTG
TTGGTTCGCCATTGCGTGCATCCTTCAGGCGATCTGGAGTATTGTGTTCG
CCCTGGAGAGCTTTATTTTCAGTGCGGTGCTACTTTGCGGCATCGCGTTG
TCCCTCGCAGTGGGTGTAGCGAGCCTGAGCTCGTTCAAGGTCGAAGCAGA
AAACTTTTACTTTTCGATCCCCTTCTGGACTGTTCATTTCCCCATCGGTC
TGCACGGAGGATGGACCCTAGCTGGCGATCTGGAGTATTGTGTTCGCCCT
GGAGAGCTTTATTTTCAGTGCGGTGCTACTTTGCGGCATCGCGTTGTCCC
TCGCAGTGGGTGTAGCGAGCCTGAGCTCGTTCAAGGTCGAAGCAGAAAAC
TTTTACTTTTCGATCCCCTTCTGGACTGTTCATTTCCCCATCGGTCTGCA
CGGAGGATGGACCCTAGCTGCTGCTCTCGTGAATATCACTGTTGCGCTGA
AGTTGGACAGCGTCAGCTCTGAGGTTGCGGGTTTGATATTAGCGATTGTG
GCAGCAAGCTTCATGGCCGCCATCGCCGCGATCGTCTTCTACGACCAGAT
CTACCTACTAGCGGTTGCGTGGGCCGTCGCCGGTATTGCCTCAAAGCAGG
ACTATCGCATCTCGCAACTGGGATCGCCCGTGGCGGACGGGGTGACCGAA
GGGTTGAACGCGCTGTGGATCGCGGTACTTTGCGTCGGGGTGCTGGGGGT
CATATCTACCGTGAGGCAGAGGAACAGGCATGTGCACGAGATGGAAGAGA
AAGGGTTGGCGACGAGGAGGACGGGGGACGGCGCAACTCAGGCGATGATC
TCGTCGTGACTGCTCTCGTGAATATCACTGTTGCGCTGAAGTTGGACAGC
GTCAGCTCTGAGGTTGCGGGTTTGATATTAGCGATTGTGGCAGCAAGCTT
CATGGCCGCCATCGCCGCGATCGTCTTCTACGACCAGATCTACCTACTAG
CGGTTGCGTGGGCCGTCGCCGGTATTGCCTCAAAGCAGGACTATCGCATC
TCGCAACTGGGATCGCCCGTGGCGGACGGGGTGACCGAAGGGTTGAACGC
GCTGTGGATCGCGGTACTTTGCGTCGGGGTGCTGGGGGTCATATCTACCG
TGAGGCAGAGGAACAGGCATGTGCACGAGATGGAAGAGAAAGGGTTGGCG
ACGAGGAGGACGGGGGACGGCGCAACTCAGGCGATGATCTCGTCGTGA
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