mRNA_F-serratus_M_contig685.17907.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig685.17907.1 vs. uniprot
Match: D7FPY9_ECTSI (FCP1 homology domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPY9_ECTSI) HSP 1 Score: 416 bits (1069), Expect = 7.420e-138 Identity = 283/544 (52.02%), Postives = 321/544 (59.01%), Query Frame = 1
Query: 1 MAGPVSVYSQALHVALAFVVLMLVAFAKSEN-----------GAVMS-SSTNEGA-GAYGRLSARR--SVGXXXXXXXXXSGKGVGISLVQR----------------------SPVLRRLRAIWSKLWHRVEDNLATRWRAAGHALASLRKAWAALWVPRPHAEADVLAEALASSSRCSEDEERRLRRATGVGAGGS----GIGSTRRSSDGSDSGGSERRGRRDSKADRRSSRSRPRGGAGEV-ASDG------GGYLRRPMGLNCVSFLSLWGYRHTTGSDGGGGSRSPKFLLVLDLDETLVHCSPCLLEPRRR--------------SLKPDLKLEMRGGAPSD-RPACMYAWKRPHLDVFLGVVSRWYEVALFTSARQCFAEPLVDLIDSQCVIGKRFYRDSCVRRNDGSRAADTGSTVASTVREAAGLLPSRGPVGARGRAGLPSGTAAGAAARGPVSLPDNLKDLQVVGSKHFPLRTVIVDNQPRAVVQQANVLPVKSWFPRDTEDRQLLDLLPVLLALTSCHDVRSILGRRQGTGV 1443
M GPVS SQALH+ALAFVVL+LVA AK+++ GA S S +N G+ GA G ARR S S + G V+R +PV+R LRA WS LWH VED+LATRWRAAG L VP PHAEAD+LA ALAS R R G+GS GR S RGG G + A+DG G +L RP+GLNC++FLSL GYR GG GSR PKFLL+LDLDETLVHCSP L++P RR + +PDLKLEMRG APSD RP+CM AWKRPHLDVFLGVVSRWYEVA+FTS RQCFAEPL+DLIDS+CVIGKRFYRDSCVRR DG+ DTG T ARG G+P+ TA A P +++KDLQVVGS+HFPLRTV+VDNQPR VVQQANVLPVKSWFPRDTEDRQLLDLLPVLLALTSC DVRS+L R G GV
Sbjct: 10 MIGPVSPLSQALHMALAFVVLVLVAIAKADDVTAVRATPYAKGASYSCSGSNSGSSGAPGSTPARRKGSRTGGGSGSVDSSQRSSGSGPVKRRRIASSSGKEKIGRRRGGGVLSAPVVRHLRAAWSSLWHAVEDDLATRWRAAGRVLTRXXXXXXXXXVPPPHAEADILAGALASPPRYPHGAAGRXXXXXXXXXXXXXXXXGVGSVXXXXXXXXXXXXXXGGRT----------SGSRGGRGALGATDGSSPSEKGLHLGRPVGLNCLNFLSLCGYR----PGGGKGSRQPKFLLLLDLDETLVHCSPHLMQPPRRHGGXXXXXXXXXXXAPRPDLKLEMRGRAPSDNRPSCMNAWKRPHLDVFLGVVSRWYEVAVFTSGRQCFAEPLIDLIDSRCVIGKRFYRDSCVRR-DGAAPPDTGRT-------------------ARGATGVPTATAEAGA---PPKSSESVKDLQVVGSEHFPLRTVLVDNQPRTVVQQANVLPVKSWFPRDTEDRQLLDLLPVLLALTSCQDVRSVLSLRPGVGV 516
BLAST of mRNA_F-serratus_M_contig685.17907.1 vs. uniprot
Match: A0A6H5JWM9_9PHAE (FCP1 homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWM9_9PHAE) HSP 1 Score: 406 bits (1044), Expect = 2.070e-130 Identity = 276/549 (50.27%), Postives = 311/549 (56.65%), Query Frame = 1
Query: 1 MAGPVSVYSQALHVALAFVVLMLVAFAKSEN-GAVMSSSTNEGAGAYGRLSARRSVGXXXXXXXXXSGKGV--------------GISLVQR----------------------SPVLRRLRAIWSKLWHRVEDNLATRWRAAGHALASLRKAWAALWVPRPHAEADVLAEALASSSRCSEDEERR----------------LRRATGVGAGGSGIGSTRRSSDGSDSGGSERRGRRDSKADRRSSRSRPRGGAGEV-ASDGGG------YLRRPMGLNCVSFLSLWGYRHTTGSDGGGGSRSPKFLLVLDLDETLVHCSPCLLEPRRR-------SLKPDLKLEMRGGAPSD-RPACMYAWKRPHLDVFLGVVSRWYEVALFTSARQCFAEPLVDLIDSQCVIGKRFYRDSCVRRNDGSRAADTGSTVASTVREAAGLLPSRGPVGARGRAGLPSGTAAGAAARGPVSLPDNLKDLQVVGSKHFPLRTVIVDNQPRAVVQQANVLPVKSWFPRDTEDRQLLDLLPVLLALTSCHDVRSILGRRQGTGV 1443
M GPVS SQALH+ALAFVVL+LVA AK+++ AV ++ +GAG G S S G G G V+R SPV R LRA WS LWH VED+LATRWRAAG L VP PHAEAD+LA ALAS R S G SG RGG G + A+DG G +L RP+GLNC++FLSL GYR GG GSR PKFLL+LDLDETLVHCSP +++P RR + +PDLKLEMRG APSD RP+CM AWKRPHLDVFLGVVSRWYEVA+FTS RQCFAEPL+DLIDS+CVIGKRFYRDSCVRR DG+ DTG T ARG G+P TA A P +++KDLQVVGS+HFPLRTV+VDNQPR VVQQANVLPVKSWFPRDTEDRQLLDLLPVLLALTSC DVRS+L R G GV
Sbjct: 311 MIGPVSPLSQALHMALAFVVLVLVAIAKADDVTAVRATPYAKGAGYSGSGSNSGSSGAPGSTPARRKGSRTXXXXXXXXXXXXXXGAGPVKRRRIASXXXKGKIGRRRGGGVLTSPVARHLRAAWSSLWHAVEDDLATRWRAAGRVLMXXXXXXXXXXVPPPHAEADILAGALASPPCYPHGATGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGRTSG--------------------ARGGRGALGATDGSGPSEKGLHLGRPVGLNCLNFLSLCGYR----PGGGRGSRQPKFLLLLDLDETLVHCSPHVMQPPRRHGGGGRGAPRPDLKLEMRGRAPSDNRPSCMDAWKRPHLDVFLGVVSRWYEVAVFTSGRQCFAEPLIDLIDSRCVIGKRFYRDSCVRR-DGAAPPDTGRT-------------------ARGATGVPVATAEAGA---PPKSSESVKDLQVVGSEHFPLRTVLVDNQPRTVVQQANVLPVKSWFPRDTEDRQLLDLLPVLLALTSCQDVRSVLSLRPGVGV 812
BLAST of mRNA_F-serratus_M_contig685.17907.1 vs. uniprot
Match: A0A7S2SLU2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SLU2_9STRA) HSP 1 Score: 135 bits (340), Expect = 4.740e-32 Identity = 81/244 (33.20%), Postives = 117/244 (47.95%), Query Frame = 1
Query: 724 RSPKFLLVLDLDETLVHCSPCLLEPRRR----SLKPDLKLEM-RGGAPSDRPACMYAWKRPHLDVFLGVVSRWYEVALFTSARQCFAEPLVDLIDSQCVIGKRFYRDSCVRRNDGSRAADTGSTVASTVREAAGLLPSRGPVGARGRAGLPSGTAAGAAARGPVSLPDNLKDLQVVGSKHFPLRTVIVDNQPRAVVQQA--NVLPVKSWFPRDTEDRQLLDLLPVLLALTSCHDVRSILGRRQG 1434
R K LVLDLDETLVH SP EP R +L D+ L + R S P ++ WKRPHLDVFL VS+ YE+ +FT+ +Q +A P++D++D QCV+ +RF+RD C + G D +VV +H P R +++DN P A N +P+ ++ D D +LL L+P LL L++ DVR++L +R+G
Sbjct: 91 RKQKMTLVLDLDETLVHSSPDPYEPLRAHGGVALPFDVHLSLPRDDKGSGTPKSIFCWKRPHLDVFLHEVSKVYEIVIFTAGQQRYASPVIDILDDQCVVDRRFFRDKCTYMSGGKYTKDLS---------------------------------------------------RVVRQEHLPHRAILIDNSPVAYESTCPENAIPIPPYYGNDPSDLELLHLIPFLLMLSTVDDVRTVLSKRRG 283
BLAST of mRNA_F-serratus_M_contig685.17907.1 vs. uniprot
Match: A0A7S0YYX4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YYX4_9CRYP) HSP 1 Score: 119 bits (298), Expect = 2.390e-27 Identity = 86/233 (36.91%), Postives = 114/233 (48.93%), Query Frame = 1
Query: 733 KFLLVLDLDETLVHCSPCLLEPRRRSLKPDLKLEMRGGAPSDRPACMYAWKRPHLDVFLGVVSRWYEVALFTSARQCFAEPLVDLIDSQCVIGKRFYRDSCVRRNDGSRAADTGSTVASTVREAAGLLPSRGPVGARGRAGLPSGTAAGAAARGPVSLPDNLKDLQVVGSKHFPLRTVIVDNQPRAV-VQQANVLPVKSWFPRDTEDRQLLDLLPVLLALTSCHDVRSILGRR 1428
K LVLDLDETLVH SP +R + D K+ + A S C + KRPH+D FL VSRW+E+ +FT++ Q +A+P++DLID + ++ +RF+R SCV RN G+ D S VR +DL V VIVDN P A + + N LP+++W D D LLDLLPVL L +DVRSIL R
Sbjct: 54 KMTLVLDLDETLVHSSP------KRLFRHDYKIHI-STADSPMGCCFFVAKRPHIDRFLRAVSRWFEIVVFTASLQHYADPVIDLIDPERLVCRRFFRGSCVDRN-GNLVKDL-----SNVR----------------------------------------RDLSQV---------VIVDNSPTAYSLHEDNALPIETWLD-DPADEALLDLLPVLSGLALLNDVRSILSLR 223
BLAST of mRNA_F-serratus_M_contig685.17907.1 vs. uniprot
Match: A0A6U2GHI8_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2GHI8_HEMAN) HSP 1 Score: 115 bits (288), Expect = 1.160e-25 Identity = 84/235 (35.74%), Postives = 116/235 (49.36%), Query Frame = 1
Query: 733 KFLLVLDLDETLVHCSPCLLEPRRRSLKPDLKLEMRGGAPSDRPA-C-MYAWKRPHLDVFLGVVSRWYEVALFTSARQCFAEPLVDLIDSQCVIGKRFYRDSCVRRNDGSRAADTGSTVASTVREAAGLLPSRGPVGARGRAGLPSGTAAGAAARGPVSLPDNLKDLQVVGSKHFPLRTVIVDNQPRAV-VQQANVLPVKSWFPRDTEDRQLLDLLPVLLALTSCHDVRSILGRR 1428
K LVLDLDETLVH SP +R + D K+ + A +D P C + KRPH+D FL VSRW+E+ +FT++ Q +A+P++DLID ++ +RF+R CV RN G+ D + RG +S + VIVDN P A + +AN LP+++W D D+ LLDLLPVL L+ +DVRSIL R
Sbjct: 57 KMTLVLDLDETLVHSSP------KRLFRYDYKIHI---ATADSPVGCWFFVAKRPHIDRFLRAVSRWFEIVVFTASLQHYADPVIDLIDPDGLVCRRFFRTGCVERN-GNLVKDLSNV------------------------------------RGDLS------------------QVVIVDNSPTAYSLHEANALPIETWHD-DPTDQALLDLLPVLSGLSLLNDVRSILSLR 226
BLAST of mRNA_F-serratus_M_contig685.17907.1 vs. uniprot
Match: A0A6V3RZ75_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A6V3RZ75_9EUKA) HSP 1 Score: 103 bits (258), Expect = 1.310e-21 Identity = 77/235 (32.77%), Postives = 115/235 (48.94%), Query Frame = 1
Query: 733 KFLLVLDLDETLVHCSPCLLEPRRRSLKPDLKLEMRGGAPSDRPAC--MYAWKRPHLDVFLGVVSRWYEVALFTSARQCFAEPLVDLIDSQCVIGKRFYRDSCVRRNDGSRAADTGSTVASTVREAAGLLPSRGPVGARGRAGLPSGTAAGAAARGPVSLPDNLKDLQVVGSKHFPLRTVIVDNQPRAV-VQQANVLPVKSWFPRDTEDRQLLDLLPVLLALTSCHDVRSILGRR 1428
+++LVLDLDETLVH S S D +LE+ ++ C Y +KRP+L FL ++S++YE+ +FT++ + +A+PL+D++DS V+ +RF+R SC+ RN GS V R A L RTVIVDN P A + + N +PVK ++ D +DR+LL +P L+AL+ DVR +L RR
Sbjct: 73 RYVLVLDLDETLVHTSRW-----GGSRSADCRLEI-----FNKHDCRAFYVYKRPYLTKFLYLMSQYYEIVVFTASMRQYADPLIDILDSHRVVSRRFFRKSCIERN--------GSYVKDLNRVAPNLE-----------------------------------------------RTVIVDNSPIAYSMNKENAVPVKPYYD-DPDDRELLTCIPFLIALSKLPDVRMLLRRR 241
BLAST of mRNA_F-serratus_M_contig685.17907.1 vs. uniprot
Match: M2W254_GALSU (Phosphatase isoform 2 n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W254_GALSU) HSP 1 Score: 105 bits (263), Expect = 1.840e-21 Identity = 76/235 (32.34%), Postives = 118/235 (50.21%), Query Frame = 1
Query: 742 LVLDLDETLVHCSPCLLEPRRRSLKPDLKLEMRGGAPSDRPACMYAWKRPHLDVFLGVVSRWYEVALFTSARQCFAEPLVDLIDSQCVIGKRFYRDSCVRRNDGSRAADTGSTVASTVREAAGLLPSRGPVGARGRAGLPSGTAAGAAARGPVSLPDNLKDLQVVGSKHFPLRTVIVDNQPRA-VVQQANVLPVKSWFPRDTEDRQLLDLLPVLLALTSCHDVRSILGRRQGTGV 1443
LVLDLDETLVH + R++ D++LE+ + + P+ Y KRP+LDVFL VVS+WY++ ++T++ Q +A+PL+D +D VI +R++RD C++ G+ +KD+ ++ + + VIVDN P A V+ + N +P+ +W+ D D +LL+LLP L AL DVRSIL R+ GV
Sbjct: 173 LVLDLDETLVHSTT------RQNSHFDIRLEV---SVDNCPSIFYVNKRPYLDVFLRVVSQWYDLVVYTASLQKYADPLIDALDVHGVIRERYFRDHCIQ---------VGNNF--------------------------------------------VKDISII--EPDLRKIVIVDNSPSAYVLHEENAIPIGTWWD-DPLDEELLNLLPFLQALCVLADVRSILSLRETKGV 342
BLAST of mRNA_F-serratus_M_contig685.17907.1 vs. uniprot
Match: A0A8B7YCW1_ACAPL (CTD nuclear envelope phosphatase 1A-like n=3 Tax=Asteroidea TaxID=7588 RepID=A0A8B7YCW1_ACAPL) HSP 1 Score: 100 bits (249), Expect = 1.990e-20 Identity = 74/232 (31.90%), Postives = 107/232 (46.12%), Query Frame = 1
Query: 739 LLVLDLDETLVHCSPC-LLEPRRRSLKPDLKLEMRGGAPSDRPACMYAWKRPHLDVFLGVVSRWYEVALFTSARQCFAEPLVDLIDS-QCVIGKRFYRDSCVRRNDGSRAADTGSTVASTVREAAGLLPSRGPVGARGRAGLPSGTAAGAAARGPVSLPDNLKDLQVVGSKHFPLRTVIVDNQPRAV-VQQANVLPVKSWFPRDTEDRQLLDLLPVLLALTSCHDVRSILGR 1425
++VLDLDETLVH L+ P R S+ PD L++ P Y +KRPH+D FL VVSRWY++ +FT++ + + P+ + +D+ + ++ +R+YR C D+GS KDL V S + IVDN P A + N +P+KSW D D LL+LLP+L A+ DVRS+L R
Sbjct: 64 IMVLDLDETLVHSQHASLMRPNRPSIPPDFVLKV---TIDSLPERFYVYKRPHVDFFLNVVSRWYDLVIFTASMEIYGSPVAEKLDNGRGILRRRYYRQHCT--------LDSGSYT---------------------------------------------KDLSAVSSDLSSI--FIVDNSPGAYKLYPDNGIPIKSWLS-DPTDIGLLNLLPILDAMRFTSDVRSVLRR 236
BLAST of mRNA_F-serratus_M_contig685.17907.1 vs. uniprot
Match: A0A7S3UUK7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUK7_HETAK) HSP 1 Score: 97.4 bits (241), Expect = 7.000e-20 Identity = 79/242 (32.64%), Postives = 112/242 (46.28%), Query Frame = 1
Query: 724 RSPKFLLVLDLDETLVHCSPCLLEPRRRSLKPDLKLEMR---GGAPSDRPACMYAWKRPHLDVFLGVVSRWYEVALFTSARQCFAEPLVDLID-SQCVIGKRFYRDSC--VRRNDGSRAADTGSTVASTVREAAGLLPSRGPVGARGRAGLPSGTAAGAAARGPVSLPDNLKDLQVVGSKHFPLRTVIVDNQPRAVVQQA-NVLPVKSWFPRDTEDRQLLDLLPVLLALTSCHDVRSILGRR 1428
R+ + LVLDLDETLVHC+ R + DL +R GA +R A + A KRPHLD FL R +EV +FT++++ +A+ L+D +D + ++ R +R++C V RN LKDL+ +G P RTV+VDN P A Q N +P+ SWF D D +LL LLP L AL + DVR I+ ++
Sbjct: 2 RTARPTLVLDLDETLVHCTA------RPGARADLTFPVRLGGAGADEERTAVVRARKRPHLDAFLRRARRLFEVVVFTASQRVYADALLDRLDPGRRLVEHRLFREACLEVERNF-------------------------------------------------------LKDLRPLGRD--PRRTVLVDNSPYAYAYQPDNGVPIASWFD-DAGDTELLKLLPFLEALAAARDVRPIIRKQ 179
BLAST of mRNA_F-serratus_M_contig685.17907.1 vs. uniprot
Match: A0A2G5BH61_COERN (FCP1 homology domain-containing protein n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BH61_COERN) HSP 1 Score: 100 bits (250), Expect = 8.270e-20 Identity = 79/235 (33.62%), Postives = 111/235 (47.23%), Query Frame = 1
Query: 733 KFLLVLDLDETLVHCSPCLLEPRRRSLKPDLKLEMRGGAPSDRPACMY-AWKRPHLDVFLGVVSRWYEVALFTSARQCFAEPLVDLIDSQC-VIGKRFYRDSCVRRNDGSRAADTGSTVASTVREAAGLLPSRGPVGARGRAGLPSGTAAGAAARGPVSLPDNLKDLQVVGSKHFPLRTVIVDNQPRAV-VQQANVLPVKSWFPRDTEDRQLLDLLPVLLALTSCHDVRSILGRR 1428
K +LVLDLDETL+H SP S + ++E+ D+ AC+Y +KRPH+D FL VS WY V +FT++ +A+P++DL+D+Q I R++RDSCV +D S A + L NL Q+V +VDN P + + N +P++ W D +D LLDLLP+L AL DVRSIL R
Sbjct: 172 KKILVLDLDETLIHSSP------HGSYRAHHRIEV----VIDKVACLYYVYKRPHVDYFLRKVSEWYTVVVFTASLAEYADPVIDLLDTQGKFISGRYFRDSCVP-HDSSYAKNL--------------------------------------------LAVNLDLSQIV----------LVDNSPLSYFINPTNGIPIQPWINSDPKDEALLDLLPLLDALRFTDDVRSILSLR 341 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig685.17907.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig685.17907.1 >prot_F-serratus_M_contig685.17907.1 ID=prot_F-serratus_M_contig685.17907.1|Name=mRNA_F-serratus_M_contig685.17907.1|organism=Fucus serratus male|type=polypeptide|length=481bp MAGPVSVYSQALHVALAFVVLMLVAFAKSENGAVMSSSTNEGAGAYGRLSback to top mRNA from alignment at F-serratus_M_contig685:72726..76682- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig685.17907.1 ID=mRNA_F-serratus_M_contig685.17907.1|Name=mRNA_F-serratus_M_contig685.17907.1|organism=Fucus serratus male|type=mRNA|length=3957bp|location=Sequence derived from alignment at F-serratus_M_contig685:72726..76682- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig685:72726..76682- >mRNA_F-serratus_M_contig685.17907.1 ID=mRNA_F-serratus_M_contig685.17907.1|Name=mRNA_F-serratus_M_contig685.17907.1|organism=Fucus serratus male|type=CDS|length=2886bp|location=Sequence derived from alignment at F-serratus_M_contig685:72726..76682- (Fucus serratus male)back to top |