mRNA_F-serratus_M_contig685.17907.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig685.17907.1
Unique NamemRNA_F-serratus_M_contig685.17907.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig685.17907.1 vs. uniprot
Match: D7FPY9_ECTSI (FCP1 homology domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPY9_ECTSI)

HSP 1 Score: 416 bits (1069), Expect = 7.420e-138
Identity = 283/544 (52.02%), Postives = 321/544 (59.01%), Query Frame = 1
Query:    1 MAGPVSVYSQALHVALAFVVLMLVAFAKSEN-----------GAVMS-SSTNEGA-GAYGRLSARR--SVGXXXXXXXXXSGKGVGISLVQR----------------------SPVLRRLRAIWSKLWHRVEDNLATRWRAAGHALASLRKAWAALWVPRPHAEADVLAEALASSSRCSEDEERRLRRATGVGAGGS----GIGSTRRSSDGSDSGGSERRGRRDSKADRRSSRSRPRGGAGEV-ASDG------GGYLRRPMGLNCVSFLSLWGYRHTTGSDGGGGSRSPKFLLVLDLDETLVHCSPCLLEPRRR--------------SLKPDLKLEMRGGAPSD-RPACMYAWKRPHLDVFLGVVSRWYEVALFTSARQCFAEPLVDLIDSQCVIGKRFYRDSCVRRNDGSRAADTGSTVASTVREAAGLLPSRGPVGARGRAGLPSGTAAGAAARGPVSLPDNLKDLQVVGSKHFPLRTVIVDNQPRAVVQQANVLPVKSWFPRDTEDRQLLDLLPVLLALTSCHDVRSILGRRQGTGV 1443
            M GPVS  SQALH+ALAFVVL+LVA AK+++           GA  S S +N G+ GA G   ARR  S           S +  G   V+R                      +PV+R LRA WS LWH VED+LATRWRAAG  L           VP PHAEAD+LA ALAS  R       R                G+GS                GR           S  RGG G + A+DG      G +L RP+GLNC++FLSL GYR      GG GSR PKFLL+LDLDETLVHCSP L++P RR              + +PDLKLEMRG APSD RP+CM AWKRPHLDVFLGVVSRWYEVA+FTS RQCFAEPL+DLIDS+CVIGKRFYRDSCVRR DG+   DTG T                   ARG  G+P+ TA   A   P    +++KDLQVVGS+HFPLRTV+VDNQPR VVQQANVLPVKSWFPRDTEDRQLLDLLPVLLALTSC DVRS+L  R G GV
Sbjct:   10 MIGPVSPLSQALHMALAFVVLVLVAIAKADDVTAVRATPYAKGASYSCSGSNSGSSGAPGSTPARRKGSRTGGGSGSVDSSQRSSGSGPVKRRRIASSSGKEKIGRRRGGGVLSAPVVRHLRAAWSSLWHAVEDDLATRWRAAGRVLTRXXXXXXXXXVPPPHAEADILAGALASPPRYPHGAAGRXXXXXXXXXXXXXXXXGVGSVXXXXXXXXXXXXXXGGRT----------SGSRGGRGALGATDGSSPSEKGLHLGRPVGLNCLNFLSLCGYR----PGGGKGSRQPKFLLLLDLDETLVHCSPHLMQPPRRHGGXXXXXXXXXXXAPRPDLKLEMRGRAPSDNRPSCMNAWKRPHLDVFLGVVSRWYEVAVFTSGRQCFAEPLIDLIDSRCVIGKRFYRDSCVRR-DGAAPPDTGRT-------------------ARGATGVPTATAEAGA---PPKSSESVKDLQVVGSEHFPLRTVLVDNQPRTVVQQANVLPVKSWFPRDTEDRQLLDLLPVLLALTSCQDVRSVLSLRPGVGV 516          
BLAST of mRNA_F-serratus_M_contig685.17907.1 vs. uniprot
Match: A0A6H5JWM9_9PHAE (FCP1 homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWM9_9PHAE)

HSP 1 Score: 406 bits (1044), Expect = 2.070e-130
Identity = 276/549 (50.27%), Postives = 311/549 (56.65%), Query Frame = 1
Query:    1 MAGPVSVYSQALHVALAFVVLMLVAFAKSEN-GAVMSSSTNEGAGAYGRLSARRSVGXXXXXXXXXSGKGV--------------GISLVQR----------------------SPVLRRLRAIWSKLWHRVEDNLATRWRAAGHALASLRKAWAALWVPRPHAEADVLAEALASSSRCSEDEERR----------------LRRATGVGAGGSGIGSTRRSSDGSDSGGSERRGRRDSKADRRSSRSRPRGGAGEV-ASDGGG------YLRRPMGLNCVSFLSLWGYRHTTGSDGGGGSRSPKFLLVLDLDETLVHCSPCLLEPRRR-------SLKPDLKLEMRGGAPSD-RPACMYAWKRPHLDVFLGVVSRWYEVALFTSARQCFAEPLVDLIDSQCVIGKRFYRDSCVRRNDGSRAADTGSTVASTVREAAGLLPSRGPVGARGRAGLPSGTAAGAAARGPVSLPDNLKDLQVVGSKHFPLRTVIVDNQPRAVVQQANVLPVKSWFPRDTEDRQLLDLLPVLLALTSCHDVRSILGRRQGTGV 1443
            M GPVS  SQALH+ALAFVVL+LVA AK+++  AV ++   +GAG  G  S   S G          G                 G   V+R                      SPV R LRA WS LWH VED+LATRWRAAG  L           VP PHAEAD+LA ALAS          R                                    S G  SG                     RGG G + A+DG G      +L RP+GLNC++FLSL GYR      GG GSR PKFLL+LDLDETLVHCSP +++P RR       + +PDLKLEMRG APSD RP+CM AWKRPHLDVFLGVVSRWYEVA+FTS RQCFAEPL+DLIDS+CVIGKRFYRDSCVRR DG+   DTG T                   ARG  G+P  TA   A   P    +++KDLQVVGS+HFPLRTV+VDNQPR VVQQANVLPVKSWFPRDTEDRQLLDLLPVLLALTSC DVRS+L  R G GV
Sbjct:  311 MIGPVSPLSQALHMALAFVVLVLVAIAKADDVTAVRATPYAKGAGYSGSGSNSGSSGAPGSTPARRKGSRTXXXXXXXXXXXXXXGAGPVKRRRIASXXXKGKIGRRRGGGVLTSPVARHLRAAWSSLWHAVEDDLATRWRAAGRVLMXXXXXXXXXXVPPPHAEADILAGALASPPCYPHGATGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGRTSG--------------------ARGGRGALGATDGSGPSEKGLHLGRPVGLNCLNFLSLCGYR----PGGGRGSRQPKFLLLLDLDETLVHCSPHVMQPPRRHGGGGRGAPRPDLKLEMRGRAPSDNRPSCMDAWKRPHLDVFLGVVSRWYEVAVFTSGRQCFAEPLIDLIDSRCVIGKRFYRDSCVRR-DGAAPPDTGRT-------------------ARGATGVPVATAEAGA---PPKSSESVKDLQVVGSEHFPLRTVLVDNQPRTVVQQANVLPVKSWFPRDTEDRQLLDLLPVLLALTSCQDVRSVLSLRPGVGV 812          
BLAST of mRNA_F-serratus_M_contig685.17907.1 vs. uniprot
Match: A0A7S2SLU2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SLU2_9STRA)

HSP 1 Score: 135 bits (340), Expect = 4.740e-32
Identity = 81/244 (33.20%), Postives = 117/244 (47.95%), Query Frame = 1
Query:  724 RSPKFLLVLDLDETLVHCSPCLLEPRRR----SLKPDLKLEM-RGGAPSDRPACMYAWKRPHLDVFLGVVSRWYEVALFTSARQCFAEPLVDLIDSQCVIGKRFYRDSCVRRNDGSRAADTGSTVASTVREAAGLLPSRGPVGARGRAGLPSGTAAGAAARGPVSLPDNLKDLQVVGSKHFPLRTVIVDNQPRAVVQQA--NVLPVKSWFPRDTEDRQLLDLLPVLLALTSCHDVRSILGRRQG 1434
            R  K  LVLDLDETLVH SP   EP R     +L  D+ L + R    S  P  ++ WKRPHLDVFL  VS+ YE+ +FT+ +Q +A P++D++D QCV+ +RF+RD C   + G    D                                                     +VV  +H P R +++DN P A       N +P+  ++  D  D +LL L+P LL L++  DVR++L +R+G
Sbjct:   91 RKQKMTLVLDLDETLVHSSPDPYEPLRAHGGVALPFDVHLSLPRDDKGSGTPKSIFCWKRPHLDVFLHEVSKVYEIVIFTAGQQRYASPVIDILDDQCVVDRRFFRDKCTYMSGGKYTKDLS---------------------------------------------------RVVRQEHLPHRAILIDNSPVAYESTCPENAIPIPPYYGNDPSDLELLHLIPFLLMLSTVDDVRTVLSKRRG 283          
BLAST of mRNA_F-serratus_M_contig685.17907.1 vs. uniprot
Match: A0A7S0YYX4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YYX4_9CRYP)

HSP 1 Score: 119 bits (298), Expect = 2.390e-27
Identity = 86/233 (36.91%), Postives = 114/233 (48.93%), Query Frame = 1
Query:  733 KFLLVLDLDETLVHCSPCLLEPRRRSLKPDLKLEMRGGAPSDRPACMYAWKRPHLDVFLGVVSRWYEVALFTSARQCFAEPLVDLIDSQCVIGKRFYRDSCVRRNDGSRAADTGSTVASTVREAAGLLPSRGPVGARGRAGLPSGTAAGAAARGPVSLPDNLKDLQVVGSKHFPLRTVIVDNQPRAV-VQQANVLPVKSWFPRDTEDRQLLDLLPVLLALTSCHDVRSILGRR 1428
            K  LVLDLDETLVH SP      +R  + D K+ +   A S    C +  KRPH+D FL  VSRW+E+ +FT++ Q +A+P++DLID + ++ +RF+R SCV RN G+   D      S VR                                        +DL  V         VIVDN P A  + + N LP+++W   D  D  LLDLLPVL  L   +DVRSIL  R
Sbjct:   54 KMTLVLDLDETLVHSSP------KRLFRHDYKIHI-STADSPMGCCFFVAKRPHIDRFLRAVSRWFEIVVFTASLQHYADPVIDLIDPERLVCRRFFRGSCVDRN-GNLVKDL-----SNVR----------------------------------------RDLSQV---------VIVDNSPTAYSLHEDNALPIETWLD-DPADEALLDLLPVLSGLALLNDVRSILSLR 223          
BLAST of mRNA_F-serratus_M_contig685.17907.1 vs. uniprot
Match: A0A6U2GHI8_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2GHI8_HEMAN)

HSP 1 Score: 115 bits (288), Expect = 1.160e-25
Identity = 84/235 (35.74%), Postives = 116/235 (49.36%), Query Frame = 1
Query:  733 KFLLVLDLDETLVHCSPCLLEPRRRSLKPDLKLEMRGGAPSDRPA-C-MYAWKRPHLDVFLGVVSRWYEVALFTSARQCFAEPLVDLIDSQCVIGKRFYRDSCVRRNDGSRAADTGSTVASTVREAAGLLPSRGPVGARGRAGLPSGTAAGAAARGPVSLPDNLKDLQVVGSKHFPLRTVIVDNQPRAV-VQQANVLPVKSWFPRDTEDRQLLDLLPVLLALTSCHDVRSILGRR 1428
            K  LVLDLDETLVH SP      +R  + D K+ +   A +D P  C  +  KRPH+D FL  VSRW+E+ +FT++ Q +A+P++DLID   ++ +RF+R  CV RN G+   D  +                                     RG +S                  + VIVDN P A  + +AN LP+++W   D  D+ LLDLLPVL  L+  +DVRSIL  R
Sbjct:   57 KMTLVLDLDETLVHSSP------KRLFRYDYKIHI---ATADSPVGCWFFVAKRPHIDRFLRAVSRWFEIVVFTASLQHYADPVIDLIDPDGLVCRRFFRTGCVERN-GNLVKDLSNV------------------------------------RGDLS------------------QVVIVDNSPTAYSLHEANALPIETWHD-DPTDQALLDLLPVLSGLSLLNDVRSILSLR 226          
BLAST of mRNA_F-serratus_M_contig685.17907.1 vs. uniprot
Match: A0A6V3RZ75_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A6V3RZ75_9EUKA)

HSP 1 Score: 103 bits (258), Expect = 1.310e-21
Identity = 77/235 (32.77%), Postives = 115/235 (48.94%), Query Frame = 1
Query:  733 KFLLVLDLDETLVHCSPCLLEPRRRSLKPDLKLEMRGGAPSDRPAC--MYAWKRPHLDVFLGVVSRWYEVALFTSARQCFAEPLVDLIDSQCVIGKRFYRDSCVRRNDGSRAADTGSTVASTVREAAGLLPSRGPVGARGRAGLPSGTAAGAAARGPVSLPDNLKDLQVVGSKHFPLRTVIVDNQPRAV-VQQANVLPVKSWFPRDTEDRQLLDLLPVLLALTSCHDVRSILGRR 1428
            +++LVLDLDETLVH S         S   D +LE+      ++  C   Y +KRP+L  FL ++S++YE+ +FT++ + +A+PL+D++DS  V+ +RF+R SC+ RN        GS V    R A  L                                                RTVIVDN P A  + + N +PVK ++  D +DR+LL  +P L+AL+   DVR +L RR
Sbjct:   73 RYVLVLDLDETLVHTSRW-----GGSRSADCRLEI-----FNKHDCRAFYVYKRPYLTKFLYLMSQYYEIVVFTASMRQYADPLIDILDSHRVVSRRFFRKSCIERN--------GSYVKDLNRVAPNLE-----------------------------------------------RTVIVDNSPIAYSMNKENAVPVKPYYD-DPDDRELLTCIPFLIALSKLPDVRMLLRRR 241          
BLAST of mRNA_F-serratus_M_contig685.17907.1 vs. uniprot
Match: M2W254_GALSU (Phosphatase isoform 2 n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W254_GALSU)

HSP 1 Score: 105 bits (263), Expect = 1.840e-21
Identity = 76/235 (32.34%), Postives = 118/235 (50.21%), Query Frame = 1
Query:  742 LVLDLDETLVHCSPCLLEPRRRSLKPDLKLEMRGGAPSDRPACMYAWKRPHLDVFLGVVSRWYEVALFTSARQCFAEPLVDLIDSQCVIGKRFYRDSCVRRNDGSRAADTGSTVASTVREAAGLLPSRGPVGARGRAGLPSGTAAGAAARGPVSLPDNLKDLQVVGSKHFPLRTVIVDNQPRA-VVQQANVLPVKSWFPRDTEDRQLLDLLPVLLALTSCHDVRSILGRRQGTGV 1443
            LVLDLDETLVH +       R++   D++LE+   +  + P+  Y  KRP+LDVFL VVS+WY++ ++T++ Q +A+PL+D +D   VI +R++RD C++          G+                                              +KD+ ++  +    + VIVDN P A V+ + N +P+ +W+  D  D +LL+LLP L AL    DVRSIL  R+  GV
Sbjct:  173 LVLDLDETLVHSTT------RQNSHFDIRLEV---SVDNCPSIFYVNKRPYLDVFLRVVSQWYDLVVYTASLQKYADPLIDALDVHGVIRERYFRDHCIQ---------VGNNF--------------------------------------------VKDISII--EPDLRKIVIVDNSPSAYVLHEENAIPIGTWWD-DPLDEELLNLLPFLQALCVLADVRSILSLRETKGV 342          
BLAST of mRNA_F-serratus_M_contig685.17907.1 vs. uniprot
Match: A0A8B7YCW1_ACAPL (CTD nuclear envelope phosphatase 1A-like n=3 Tax=Asteroidea TaxID=7588 RepID=A0A8B7YCW1_ACAPL)

HSP 1 Score: 100 bits (249), Expect = 1.990e-20
Identity = 74/232 (31.90%), Postives = 107/232 (46.12%), Query Frame = 1
Query:  739 LLVLDLDETLVHCSPC-LLEPRRRSLKPDLKLEMRGGAPSDRPACMYAWKRPHLDVFLGVVSRWYEVALFTSARQCFAEPLVDLIDS-QCVIGKRFYRDSCVRRNDGSRAADTGSTVASTVREAAGLLPSRGPVGARGRAGLPSGTAAGAAARGPVSLPDNLKDLQVVGSKHFPLRTVIVDNQPRAV-VQQANVLPVKSWFPRDTEDRQLLDLLPVLLALTSCHDVRSILGR 1425
            ++VLDLDETLVH     L+ P R S+ PD  L++        P   Y +KRPH+D FL VVSRWY++ +FT++ + +  P+ + +D+ + ++ +R+YR  C          D+GS                                               KDL  V S    +   IVDN P A  +   N +P+KSW   D  D  LL+LLP+L A+    DVRS+L R
Sbjct:   64 IMVLDLDETLVHSQHASLMRPNRPSIPPDFVLKV---TIDSLPERFYVYKRPHVDFFLNVVSRWYDLVIFTASMEIYGSPVAEKLDNGRGILRRRYYRQHCT--------LDSGSYT---------------------------------------------KDLSAVSSDLSSI--FIVDNSPGAYKLYPDNGIPIKSWLS-DPTDIGLLNLLPILDAMRFTSDVRSVLRR 236          
BLAST of mRNA_F-serratus_M_contig685.17907.1 vs. uniprot
Match: A0A7S3UUK7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUK7_HETAK)

HSP 1 Score: 97.4 bits (241), Expect = 7.000e-20
Identity = 79/242 (32.64%), Postives = 112/242 (46.28%), Query Frame = 1
Query:  724 RSPKFLLVLDLDETLVHCSPCLLEPRRRSLKPDLKLEMR---GGAPSDRPACMYAWKRPHLDVFLGVVSRWYEVALFTSARQCFAEPLVDLID-SQCVIGKRFYRDSC--VRRNDGSRAADTGSTVASTVREAAGLLPSRGPVGARGRAGLPSGTAAGAAARGPVSLPDNLKDLQVVGSKHFPLRTVIVDNQPRAVVQQA-NVLPVKSWFPRDTEDRQLLDLLPVLLALTSCHDVRSILGRR 1428
            R+ +  LVLDLDETLVHC+       R   + DL   +R    GA  +R A + A KRPHLD FL    R +EV +FT++++ +A+ L+D +D  + ++  R +R++C  V RN                                                        LKDL+ +G    P RTV+VDN P A   Q  N +P+ SWF  D  D +LL LLP L AL +  DVR I+ ++
Sbjct:    2 RTARPTLVLDLDETLVHCTA------RPGARADLTFPVRLGGAGADEERTAVVRARKRPHLDAFLRRARRLFEVVVFTASQRVYADALLDRLDPGRRLVEHRLFREACLEVERNF-------------------------------------------------------LKDLRPLGRD--PRRTVLVDNSPYAYAYQPDNGVPIASWFD-DAGDTELLKLLPFLEALAAARDVRPIIRKQ 179          
BLAST of mRNA_F-serratus_M_contig685.17907.1 vs. uniprot
Match: A0A2G5BH61_COERN (FCP1 homology domain-containing protein n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BH61_COERN)

HSP 1 Score: 100 bits (250), Expect = 8.270e-20
Identity = 79/235 (33.62%), Postives = 111/235 (47.23%), Query Frame = 1
Query:  733 KFLLVLDLDETLVHCSPCLLEPRRRSLKPDLKLEMRGGAPSDRPACMY-AWKRPHLDVFLGVVSRWYEVALFTSARQCFAEPLVDLIDSQC-VIGKRFYRDSCVRRNDGSRAADTGSTVASTVREAAGLLPSRGPVGARGRAGLPSGTAAGAAARGPVSLPDNLKDLQVVGSKHFPLRTVIVDNQPRAV-VQQANVLPVKSWFPRDTEDRQLLDLLPVLLALTSCHDVRSILGRR 1428
            K +LVLDLDETL+H SP        S +   ++E+      D+ AC+Y  +KRPH+D FL  VS WY V +FT++   +A+P++DL+D+Q   I  R++RDSCV  +D S A +                                             L  NL   Q+V          +VDN P +  +   N +P++ W   D +D  LLDLLP+L AL    DVRSIL  R
Sbjct:  172 KKILVLDLDETLIHSSP------HGSYRAHHRIEV----VIDKVACLYYVYKRPHVDYFLRKVSEWYTVVVFTASLAEYADPVIDLLDTQGKFISGRYFRDSCVP-HDSSYAKNL--------------------------------------------LAVNLDLSQIV----------LVDNSPLSYFINPTNGIPIQPWINSDPKDEALLDLLPLLDALRFTDDVRSILSLR 341          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig685.17907.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPY9_ECTSI7.420e-13852.02FCP1 homology domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JWM9_9PHAE2.070e-13050.27FCP1 homology domain-containing protein n=1 Tax=Ec... [more]
A0A7S2SLU2_9STRA4.740e-3233.20Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S0YYX4_9CRYP2.390e-2736.91Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A6U2GHI8_HEMAN1.160e-2535.74Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A0A6V3RZ75_9EUKA1.310e-2132.77Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
M2W254_GALSU1.840e-2132.34Phosphatase isoform 2 n=2 Tax=Galdieria sulphurari... [more]
A0A8B7YCW1_ACAPL1.990e-2031.90CTD nuclear envelope phosphatase 1A-like n=3 Tax=A... [more]
A0A7S3UUK7_HETAK7.000e-2032.64Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A2G5BH61_COERN8.270e-2033.62FCP1 homology domain-containing protein n=1 Tax=Co... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig685contigF-serratus_M_contig685:72726..76682 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score424.5
Seed ortholog evalue6.7e-116
Seed eggNOG ortholog2880.D7FPY9
KEGG koko:K15731
Hectar predicted targeting categorychloroplast
EggNOG free text desc.phosphoprotein phosphatase activity
EggNOG OGsCOG5190@1,KOG1605@2759
EC3.1.3.16
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01009,ko03021
Exons2
Model size1443
Cds size1443
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932094.528107-CDS-F-serratus_M_contig685:72725..731961622932094.528107-CDS-F-serratus_M_contig685:72725..73196Fucus serratus maleCDSF-serratus_M_contig685 72726..73196 -
1690964144.0737507-CDS-F-serratus_M_contig685:72725..731961690964144.0737507-CDS-F-serratus_M_contig685:72725..73196Fucus serratus maleCDSF-serratus_M_contig685 72726..73196 -
1622932094.5403514-CDS-F-serratus_M_contig685:75710..766821622932094.5403514-CDS-F-serratus_M_contig685:75710..76682Fucus serratus maleCDSF-serratus_M_contig685 75711..76682 -
1690964144.0896301-CDS-F-serratus_M_contig685:75710..766821690964144.0896301-CDS-F-serratus_M_contig685:75710..76682Fucus serratus maleCDSF-serratus_M_contig685 75711..76682 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig685.17907.1prot_F-serratus_M_contig685.17907.1Fucus serratus malepolypeptideF-serratus_M_contig685 72726..76682 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig685.17907.1

>prot_F-serratus_M_contig685.17907.1 ID=prot_F-serratus_M_contig685.17907.1|Name=mRNA_F-serratus_M_contig685.17907.1|organism=Fucus serratus male|type=polypeptide|length=481bp
MAGPVSVYSQALHVALAFVVLMLVAFAKSENGAVMSSSTNEGAGAYGRLS
ARRSVGGGGKKKRRRSGKGVGISLVQRSPVLRRLRAIWSKLWHRVEDNLA
TRWRAAGHALASLRKAWAALWVPRPHAEADVLAEALASSSRCSEDEERRL
RRATGVGAGGSGIGSTRRSSDGSDSGGSERRGRRDSKADRRSSRSRPRGG
AGEVASDGGGYLRRPMGLNCVSFLSLWGYRHTTGSDGGGGSRSPKFLLVL
DLDETLVHCSPCLLEPRRRSLKPDLKLEMRGGAPSDRPACMYAWKRPHLD
VFLGVVSRWYEVALFTSARQCFAEPLVDLIDSQCVIGKRFYRDSCVRRND
GSRAADTGSTVASTVREAAGLLPSRGPVGARGRAGLPSGTAAGAAARGPV
SLPDNLKDLQVVGSKHFPLRTVIVDNQPRAVVQQANVLPVKSWFPRDTED
RQLLDLLPVLLALTSCHDVRSILGRRQGTGV
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mRNA from alignment at F-serratus_M_contig685:72726..76682-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig685.17907.1 ID=mRNA_F-serratus_M_contig685.17907.1|Name=mRNA_F-serratus_M_contig685.17907.1|organism=Fucus serratus male|type=mRNA|length=3957bp|location=Sequence derived from alignment at F-serratus_M_contig685:72726..76682- (Fucus serratus male)
ATGGCCGGCCCCGTGTCCGTGTATTCCCAGGCGCTGCACGTCGCTCTAGC ATTCGTGGTCCTGATGCTGGTGGCATTCGCTAAGTCGGAGAACGGGGCAG TCATGAGCAGTTCGACGAACGAGGGAGCCGGGGCCTATGGCAGGCTGTCC GCACGCCGTAGCGTCGGTGGCGGGGGGAAAAAGAAGCGGCGAAGATCTGG CAAAGGAGTAGGAATCTCTCTGGTGCAGCGCTCGCCCGTGCTGCGCCGGT TGCGGGCCATCTGGTCCAAGCTGTGGCACCGCGTGGAGGACAACCTGGCC ACGCGATGGCGCGCCGCGGGACATGCCCTGGCATCGCTTCGCAAGGCGTG GGCGGCGCTGTGGGTGCCGCGGCCGCACGCGGAGGCTGACGTGCTGGCCG AAGCGTTGGCGTCATCCTCGCGATGCTCCGAGGACGAGGAACGACGCCTC AGACGAGCCACTGGTGTCGGTGCAGGTGGCTCAGGCATTGGAAGCACCCG CAGGAGCAGCGATGGAAGCGATTCTGGTGGTTCGGAGCGGCGAGGGCGGC GAGATAGCAAGGCCGACAGACGGAGTTCGCGCAGCAGGCCACGCGGCGGA GCGGGAGAAGTTGCCTCGGACGGTGGGGGTTACCTCCGACGACCAATGGG CCTGAACTGTGTAAGCTTCCTGAGCCTTTGGGGGTACCGCCACACGACCG GGTCGGACGGAGGCGGGGGTTCTCGGTCCCCGAAATTCCTCCTGGTGCTG GACCTTGACGAAACCCTGGTGCACTGCAGTCCCTGCCTCTTGGAGCCGAG GCGAAGATCTTTGAAGCCTGATCTGAAGCTCGAAATGAGGGGTGGCGCTC CGTCAGACCGGCCGGCGTGCATGTATGCGTGGAAACGACCGCACTTGGAC GTTTTTCTGGGCGTGGTGAGCAGATGGTACGAGGTCGCGTTGTTCACCAG CGCCCGCCAGTGCTTCGCCGAGGTGAGGGTGTTGGTCGTCGTCGGAACGG TTGTTTTGATAAAATCGATGAACTGAAAACTCAGATATGCGCACTACTAG GTCACCGTTAAAACCATGCCAGGTGTGCCCTTTTGTGCGCGCGGACGCAA GCGTCTCCTTTTATCTCCGTCAAGTTGATGGGTTCATTGGTTCCTCTACA TGTGGGTGCCTTCCCTGAGTCCATGGGGGGCCACAAATTTCCAAACATAA ATTGTCCAGGTCGGTGACATCATCACCTCACGACACTACGTATGTATAAA AAAAGGCTTTCAACCAACCGTCAGCCGCACTTAACTTGGTTTGGGTGTAC AGTACAGTACAGTACAGAAAACACGACTTCTCTTCACTTGGGTGCCTTAT CAATGACTTGTCTCCAAAGCGCGCATCCGTTTTGCCCAATTTTATACCAA TATATAGTATATAGTATGTAATAGTTCTGTCGGTTCCGAGACGTCACACG TCACGAAATGTTGGCCCGATGCTTGTACGGTAAGATGAAGATGATGCCTA TGGAGGCTGAAGCAAGGCTAAGGACGCCAACATTTACACAGTGAAGTGTT GACCGTTCTCTCCGAGCATCTATCCGATATCCAACGCCCGCACGGAGCCA TTGCTCCAAAACCGACGTGGAGAGGGGGCGTGGTGCAGAGCTATTTATAG GAGTTGAAAATACCGCAGCGATGGGCTGATCGAAGAAACGGTATACGGTA TGTTACTACCACTACCGTGTGTTAGAGGCGTATTAATAGGACACGCTTGT CACTTCCGTCGATAATGTAATCTAATCTAATATAACCCAATCTAATATAA TATCAGCGTCCACATTTTGGGGGCGACGGTTGAAATGGTCAAGAGATTAA TAGCGGTGTACATTACAAAATACAGCACGAAGGAGAAATTAAAACTGGAA AAGAGGGAGCGAACACAGCAGAGCAACAAAATCCGCGAACAATATTTTGT TCTTCTGCCTCCGCCGCACCCCCCCCCCCCCTGGGCTTTGGGCTGAGTCA CTCGACTTGAAGAGACGTAAGCGAGGCACTCGACTTGAAGGTTCTGGTCG AACTCTCTCCGACAAAAAGCCCGAAAATTGAAAAATAATTGAAATTTGCG GCCCGAGGTCCAAAGAGGGTCTCCGAAAAACAGTTACCAGTGCCTTTAAA AAAATAAAATGAGACTGAGCCCATCGTAAAACCTTCCAAAACAGGTGCGC ACTTTCAAGCGCAAAGTAGCCGTACCGTTAGCCATCCAGTATTTAGTTCT TGTTGGGTTTTTTTTTGCCCAGGGCCAGTCATGATGCGGAGTAAAAGACG GGACCAGTTCTTAAGCTGGTTGCGGACAGGGTCGACGCGCCGCCTCCGGT TGGCGGATGTCGTGATGCGAGCTACAGTGATTTTACTAGATCTAGAGTGT ACCTGTAGTGTGGGAAAGAGGAAGAGGGAGAGGGAAAAAATGGGTAAACG TCACAACAGGGTATATACCCTGGTCAAAACGCGACACATCAGGGTACTTA CTTACAGCGTGAAACGGACACAGCTGATTGGTCGACGCCCACTTTCACTC TGCCGTGTCCGAAAAACGGCGGGGTATACCCTGTCACGTCTACTTTTCTC CAGAACTGTACCCCGATTTTCTGAAATGTACCCTGACCAGGCGGGAAGCG GGACGCTTCCATCGGCAATTTTCTCCGCACTTATTACTTTTCCCTCCCAG CAAAGGACACCAATATTCCTGCCTGGCAACCGGCATTGCTTTTTTAGGCG AGCGGTCCGCTCCTACCAAAGAGCACCAAAACATCAAATCTTCCGTTTCA AAACATTAATGACATATACCACCAGAAAACATTTCAATCGAATTCAGATT TGATTCATGAATTTTGCATTTGGTCGACAGCGTTGTTGCTTCTACATGCT GCCTACTGTATTGATGGTACTGTACTGTACTGTACTGTACTACAGAAATG TGAGAGAGTATGTGTCACTCGGTAACCGAAACGCTCGGGCCAACGCGTGG CCTAAAGAGCTACGAGGTGCTGTGGATTTATAACCAGTTTTTTTACTCCG TACATTTTTGGCCGTGTGGCCGATGACGAGCAGTTTACTTCAGGTCACCT CAACTGCAGAGAGTAAATTTGGTACCAGTATAGTAGCGACCGCCGAAGTT ACAACATCCGAACACAGAGGGGTGTAAAGTCACAGTGCTTTTTTGCGCGA GAGGGTGAATTTGCATCGATATTCTTATTGAGGTTGACACCCCCAGAATT CAAAACTCGATCGATATTTTTTTTTAAACACGCACGGTTGTATATGCTCA CGTGTCCTTCGAATGCCTTAGGCTTATGGTCATCAAAATTCCATTTCAAT GTTCTTACAAGTAGGCCCCGAAATGCTAATAAACTGTCCCGGCCGTTTCT AGGCCCACCTTCGCTTCTTGCGCGTTTTTTTTCTCCATCTCATTTCCCTT CCGTTTTCTCGTTTCCCCCCCGCCTCCCCTCTCCAGCCCCTCGTAGACCT CATCGATTCGCAGTGCGTCATTGGTAAGCGCTTCTACCGCGACAGCTGCG TCCGCCGGAACGACGGAAGCCGCGCGGCCGACACCGGCAGCACCGTAGCC TCGACAGTCCGCGAGGCCGCGGGGCTGCTGCCCAGCCGTGGACCGGTTGG CGCCAGAGGGAGAGCGGGGCTGCCATCGGGGACGGCAGCGGGGGCTGCGG CACGCGGACCGGTCTCCTTGCCGGACAATCTCAAAGACCTCCAGGTGGTC GGCTCGAAGCACTTCCCCCTTCGCACAGTGATCGTGGACAACCAGCCCAG GGCCGTGGTCCAGCAGGCCAACGTGCTCCCGGTCAAGTCGTGGTTCCCCC GCGACACAGAAGATCGACAGCTGCTCGATCTTTTGCCCGTACTTCTTGCC CTTACCTCTTGCCACGACGTGAGGTCGATCTTGGGGCGCAGGCAAGGGAC CGGGGTT
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Coding sequence (CDS) from alignment at F-serratus_M_contig685:72726..76682-

>mRNA_F-serratus_M_contig685.17907.1 ID=mRNA_F-serratus_M_contig685.17907.1|Name=mRNA_F-serratus_M_contig685.17907.1|organism=Fucus serratus male|type=CDS|length=2886bp|location=Sequence derived from alignment at F-serratus_M_contig685:72726..76682- (Fucus serratus male)
ATGGCCGGCCCCGTGTCCGTGTATTCCCAGGCGCTGCACGTCGCTCTAGC
ATTCGTGGTCCTGATGCTGGTGGCATTCGCTAAGTCGGAGAACGGGGCAG
TCATGAGCAGTTCGACGAACGAGGGAGCCGGGGCCTATGGCAGGCTGTCC
GCACGCCGTAGCGTCGGTGGCGGGGGGAAAAAGAAGCGGCGAAGATCTGG
CAAAGGAGTAGGAATCTCTCTGGTGCAGCGCTCGCCCGTGCTGCGCCGGT
TGCGGGCCATCTGGTCCAAGCTGTGGCACCGCGTGGAGGACAACCTGGCC
ACGCGATGGCGCGCCGCGGGACATGCCCTGGCATCGCTTCGCAAGGCGTG
GGCGGCGCTGTGGGTGCCGCGGCCGCACGCGGAGGCTGACGTGCTGGCCG
AAGCGTTGGCGTCATCCTCGCGATGCTCCGAGGACGAGGAACGACGCCTC
AGACGAGCCACTGGTGTCGGTGCAGGTGGCTCAGGCATTGGAAGCACCCG
CAGGAGCAGCGATGGAAGCGATTCTGGTGGTTCGGAGCGGCGAGGGCGGC
GAGATAGCAAGGCCGACAGACGGAGTTCGCGCAGCAGGCCACGCGGCGGA
GCGGGAGAAGTTGCCTCGGACGGTGGGGGTTACCTCCGACGACCAATGGG
CCTGAACTGTGTAAGCTTCCTGAGCCTTTGGGGGTACCGCCACACGACCG
GGTCGGACGGAGGCGGGGGTTCTCGGTCCCCGAAATTCCTCCTGGTGCTG
GACCTTGACGAAACCCTGGTGCACTGCAGTCCCTGCCTCTTGGAGCCGAG
GCGAAGATCTTTGAAGCCTGATCTGAAGCTCGAAATGAGGGGTGGCGCTC
CGTCAGACCGGCCGGCGTGCATGTATGCGTGGAAACGACCGCACTTGGAC
GTTTTTCTGGGCGTGGTGAGCAGATGGTACGAGGTCGCGTTGTTCACCAG
CGCCCGCCAGTGCTTCGCCGAGATGGCCGGCCCCGTGTCCGTGTATTCCC
AGGCGCTGCACGTCGCTCTAGCATTCGTGGTCCTGATGCTGGTGGCATTC
GCTAAGTCGGAGAACGGGGCAGTCATGAGCAGTTCGACGAACGAGGGAGC
CGGGGCCTATGGCAGGCTGTCCGCACGCCGTAGCGTCGGTGGCGGGGGGA
AAAAGAAGCGGCGAAGATCTGGCAAAGGAGTAGGAATCTCTCTGGTGCAG
CGCTCGCCCGTGCTGCGCCGGTTGCGGGCCATCTGGTCCAAGCTGTGGCA
CCGCGTGGAGGACAACCTGGCCACGCGATGGCGCGCCGCGGGACATGCCC
TGGCATCGCTTCGCAAGGCGTGGGCGGCGCTGTGGGTGCCGCGGCCGCAC
GCGGAGGCTGACGTGCTGGCCGAAGCGTTGGCGTCATCCTCGCGATGCTC
CGAGGACGAGGAACGACGCCTCAGACGAGCCACTGGTGTCGGTGCAGGTG
GCTCAGGCATTGGAAGCACCCGCAGGAGCAGCGATGGAAGCGATTCTGGT
GGTTCGGAGCGGCGAGGGCGGCGAGATAGCAAGGCCGACAGACGGAGTTC
GCGCAGCAGGCCACGCGGCGGAGCGGGAGAAGTTGCCTCGGACGGTGGGG
GTTACCTCCGACGACCAATGGGCCTGAACTGTGTAAGCTTCCTGAGCCTT
TGGGGGTACCGCCACACGACCGGGTCGGACGGAGGCGGGGGTTCTCGGTC
CCCGAAATTCCTCCTGGTGCTGGACCTTGACGAAACCCTGGTGCACTGCA
GTCCCTGCCTCTTGGAGCCGAGGCGAAGATCTTTGAAGCCTGATCTGAAG
CTCGAAATGAGGGGTGGCGCTCCGTCAGACCGGCCGGCGTGCATGTATGC
GTGGAAACGACCGCACTTGGACGTTTTTCTGGGCGTGGTGAGCAGATGGT
ACGAGGTCGCGTTGTTCACCAGCGCCCGCCAGTGCTTCGCCGAGCCCCTC
GTAGACCTCATCGATTCGCAGTGCGTCATTGGTAAGCGCTTCTACCGCGA
CAGCTGCGTCCGCCGGAACGACGGAAGCCGCGCGGCCGACACCGGCAGCA
CCGTAGCCTCGACAGTCCGCGAGGCCGCGGGGCTGCTGCCCAGCCGTGGA
CCGGTTGGCGCCAGAGGGAGAGCGGGGCTGCCATCGGGGACGGCAGCGGG
GGCTGCGGCACGCGGACCGGTCTCCTTGCCGGACAATCTCAAAGACCTCC
AGGTGGTCGGCTCGAAGCACTTCCCCCTTCGCACAGTGATCGTGGACAAC
CAGCCCAGGGCCGTGGTCCAGCAGGCCAACGTGCTCCCGGTCAAGTCGTG
GTTCCCCCGCGACACAGAAGATCGACAGCTGCTCGATCTTTTGCCCGTAC
TTCTTGCCCTTACCTCTTGCCACGACGTGAGGTCGATCTTGGGGCGCAGG
CAAGGGACCGGGGTTCCCCTCGTAGACCTCATCGATTCGCAGTGCGTCAT
TGGTAAGCGCTTCTACCGCGACAGCTGCGTCCGCCGGAACGACGGAAGCC
GCGCGGCCGACACCGGCAGCACCGTAGCCTCGACAGTCCGCGAGGCCGCG
GGGCTGCTGCCCAGCCGTGGACCGGTTGGCGCCAGAGGGAGAGCGGGGCT
GCCATCGGGGACGGCAGCGGGGGCTGCGGCACGCGGACCGGTCTCCTTGC
CGGACAATCTCAAAGACCTCCAGGTGGTCGGCTCGAAGCACTTCCCCCTT
CGCACAGTGATCGTGGACAACCAGCCCAGGGCCGTGGTCCAGCAGGCCAA
CGTGCTCCCGGTCAAGTCGTGGTTCCCCCGCGACACAGAAGATCGACAGC
TGCTCGATCTTTTGCCCGTACTTCTTGCCCTTACCTCTTGCCACGACGTG
AGGTCGATCTTGGGGCGCAGGCAAGGGACCGGGGTT
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