prot_F-serratus_M_contig6848.17899.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig6848.17899.1
Unique Name	prot_F-serratus_M_contig6848.17899.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	258

Homology

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BLAST of mRNA_F-serratus_M_contig6848.17899.1 vs. uniprot
Match: D8LLP4_ECTSI (Leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP4_ECTSI)

HSP 1 Score: 264 bits (675), Expect = 5.530e-85
Identity = 179/227 (78.85%), Postives = 192/227 (84.58%), Query Frame = 0

Query:    8 SSHASTFSRGQGTSSNIRDALPSLPGSQPKNKTGRKVTAQKMKTARATGVLALQEHGLKEVPEELFQLVNLRTLNLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLSALLALTDLSAGGNSLRGAEALGSLPPSLSKLSLRDNRLGEVPFAVLSGLPALQVLDLSTNGIDTLPPLAAALPALAELILDGNALRTLGDELARSSKLKKLSVKSNRIGARNPITG 234
            SSH+STFSRGQG +S+ RDAL SLPGS PKNKTGRKVTAQKMKTA ATGVLALQEHGLKE+PE LF LV LRTLN+ASXXXXXXXXXXXXXXXXXXXXXXXXXXXX  DLSAL +LTD+SAG N L GA ALG+LP  L KL LRDNRLGEVP AVL GLPALQVLDLS NGI+ LPP  A LPAL ELILD N+LR LGDEL   SKLKKLSV+SNRI A +P +G
Sbjct:    6 SSHSSTFSRGQGATSDFRDALTSLPGSAPKNKTGRKVTAQKMKTAGATGVLALQEHGLKEIPEGLFTLVKLRTLNMASXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPDLSALSSLTDVSAGSNQLAGAGALGALPACLKKLVLRDNRLGEVPAAVLDGLPALQVLDLSANGIEGLPPFGATLPALEELILDENSLRALGDELVGLSKLKKLSVRSNRIAAVDPFSG 232

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BLAST of mRNA_F-serratus_M_contig6848.17899.1 vs. uniprot
Match: A0A7S2EAS0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EAS0_TRICV)

HSP 1 Score: 87.8 bits (216), Expect = 6.290e-17
Identity = 66/200 (33.00%), Postives = 101/200 (50.50%), Query Frame = 0

Query:   47 QKMKTARATGVLALQEHGLKEVPEELFQLVNLRTLNLA--SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLSALLALTDLSAGGNSLRGA-----------EALGSLPPSLSKLSLRDNRLGEVPFAVLS-GLPALQVLDLSTNGIDTLPPLAAALPALAELILDGNALRTLGDELARSSKLKKLSVKSNRIGARNPI 232
            QK++TA+ TG+L+L+EH L +VP+ +++L NLRTL+L+  +                               +S L  L  LSAGGN L              E L SLP SL +L L  N    VP  + +  L  L+ LDLS N + T+P   A L +L ++ LD N++ +L +E+ +  KLK LS+++N I   + +
Sbjct:    1 QKIETAQKTGILSLREHKLDDVPDSVYELSNLRTLDLSKNNLTVLGRNLVNLANLKSLNCDSNKLQPGSLAPVSRLSKLQTLSAGGNRLGEPSRTEGPSQPQPEPLPSLPVSLKQLKLDTNFFSSVPPQICNPSLVKLEKLDLSFNFLATIPAGIAYLTSLVDINLDSNSIVSLPEEIGQLKKLKALSLRNNHIQVHSTV 200

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BLAST of mRNA_F-serratus_M_contig6848.17899.1 vs. uniprot
Match: A0A6T7I766_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7I766_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 6.390e-15
Identity = 84/164 (51.22%), Postives = 107/164 (65.24%), Query Frame = 0

Query:   34 SQPKNKTGRKVTAQKMKTARATGVLALQEHGLKEVPEELFQLVNLRTLNLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--DLSALLALTDLSAGGNSL----------RGAEALGSLPPSLSKLSLRDNRLGEVPFAVLS-GLPALQVLDLSTNGIDTLP 184
            S P N+TG+ V  QK++ A+ TGVL+LQEH L+E+PE++F+LVN+RTL++  XXXXXXXXXXXXXXXXXXXXXXXXX        +++L  L  LSAGGN L          +    L  LPPSL +L L  N L  VP  + S GL  L+ LDLS N +  +P
Sbjct:    6 STPTNRTGKDVVRQKVENAQKTGVLSLQEHKLEEIPEKVFRLVNIRTLDVXXXXXXXXXXXXXXXXXXXXXXXXXXXLQAGSLAPVTSLNKLQTLSAGGNQLGKPVVIQGQTKSPNVLPKLPPSLKQLKLDFNFLSNVPKQIFSSGLVKLEKLDLSKNMLAAVP 169

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BLAST of mRNA_F-serratus_M_contig6848.17899.1 vs. uniprot
Match: A0A7S2PXK3_9STRA (Hypothetical protein (Fragment) n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PXK3_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 4.720e-14
Identity = 57/171 (33.33%), Postives = 88/171 (51.46%), Query Frame = 0

Query:   34 SQPK-NKTGRKVTAQKMKTARATGVLALQEHGLKEVPEELFQLVNLRTLNLA-SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLSALLALTDLSAGGNSLRGA--EALGSLPPSLSKLSLRDNRLGEVPFAVLSG-LPALQVLDLSTNGIDTLPPLAAALPALAELILD 199
            SQPK NKTG+KV +QK++ A+ T +L+L EH L+E+PEE+F L +LRTL+++ +                               +S L  L  LS G N L     ++  +LP  +  L +  N    +P  ++   L  L+ LDL++N + ++P   + L AL ELILD
Sbjct:   19 SQPKKNKTGKKVVSQKIENAKKTNILSLTEHKLEEIPEEVFHLTSLRTLDISKNKLQRLGNIGRLTELKTLNCDDNSLHSSAIAPISKLAKLQSLSLGKNRLEDPANQSFPTLPSKIKTLKIHHNSFSSIPKQIVDPKLRLLEKLDLASNNLASIPAGISNLVALTELILD 189

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BLAST of mRNA_F-serratus_M_contig6848.17899.1 vs. uniprot
Match: A0A225UJM0_9STRA (Putative LRR protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UJM0_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 1.000e-13
Identity = 89/163 (54.60%), Postives = 107/163 (65.64%), Query Frame = 0

Query:   34 SQPKNKTGRKVTAQKMKTARATGVLALQEHGLKEVPEELFQLVNLRTLNLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLSALLALTDLSAGGNSLRGAEALGSLPPSLSKLSLRDNRLGEVPFAVLSGLPALQVLDL------------STNGIDTLP 184
            S+PKN   R V  QK+K+A+ATGVLAL    LK++P+EL+QL  LR+L+L+ XXXXXXXXXXXXXXXXXXXXXXXXX     DLS L ALT L   GN L       +LPP+L KLSL+ N+L  VP ++LS L  LQ LDL            S N +D LP
Sbjct:   17 SKPKN--SRSVQQQKLKSAKATGVLALPNSKLKKLPDELWQLSTLRSLDLSXXXXXXXXXXXXXXXXXXXXXXXXXXLAALPDLSPLQALTTLVLDGNVLEDLPL--ALPPNLIKLSLKGNKLRAVPRSILS-LVHLQELDLIXXXXXXXXXXXSDNALDLLP 174

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BLAST of mRNA_F-serratus_M_contig6848.17899.1 vs. uniprot
Match: A0A5D6XNJ4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XNJ4_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 2.080e-13
Identity = 59/161 (36.65%), Postives = 82/161 (50.93%), Query Frame = 0

Query:   42 RKVTAQKMKTARATGVLALQEHGLKEVPEELFQLVNLRTLNLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLSALLALTDLSA-------GGNSLRGAEALGSLPPSLSKLSLRDNRLGEVPFAVLSGLPALQVLDLSTNGIDTLPPLAAALPALAE 195
            R V  QK+K+A ATGVLAL +H LK++P EL +L NLR+L+++S                                +AL AL DLSA                   +LPP+L+KLSL++NRL E+P +V + L  LQ LD+S N +  LP    AL +L +
Sbjct:   23 RSVLQQKLKSAAATGVLALPDHKLKQLPRELLELANLRSLDVSSNRLAELPRDFAAALPQLRTLKLAG--------NALTALPDLSALTXXXXXXXXXXXXXXXXEALPPNLTKLSLKNNRLRELPLSV-TRLAQLQELDVSGNELAALPEHVGALASLVD 174

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BLAST of mRNA_F-serratus_M_contig6848.17899.1 vs. uniprot
Match: H3GRI1_PHYRM (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=H3GRI1_PHYRM)

HSP 1 Score: 77.0 bits (188), Expect = 5.940e-13
Identity = 79/131 (60.31%), Postives = 94/131 (71.76%), Query Frame = 0

Query:   34 SQPKNKTGRKVTAQKMKTARATGVLALQEHGLKEVPEELFQLVNLRTLNLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLSALLALTDLSAGGNSLRGAEALGSLPPSLSKLSLRDNRLGEVPFAVL 164
            S+PKN   R V  QK+++A+ATGVLAL    LK++PEEL +L  LRTL+L  XXXXXXXXXXXXXXXXXXXXXXXX      DLSAL ALT L   GN L    +  +LPP+L+KLSL+ NRL  VP +VL
Sbjct:   17 SKPKN--NRSVQQQKLRSAKATGVLALPNSKLKKLPEELLELSTLRTLDLXXXXXXXXXXXXXXXXXXXXXXXXXXVLVTLPDLSALEALTTLVLDGNLLEDIPS--ALPPNLTKLSLKGNRLRAVPRSVL 143

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BLAST of mRNA_F-serratus_M_contig6848.17899.1 vs. uniprot
Match: A0A7S2GV98_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GV98_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 2.270e-12
Identity = 88/193 (45.60%), Postives = 126/193 (65.28%), Query Frame = 0

Query:   34 SQPKNKTGRKVTAQKMKTARATGVLALQEHGLKEVPEELFQLVNLRTLNLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLSALLALTDLSAGGNSLRGAEALGSLPPSLSKLSLRDNRLGEVPFAVLSGLPALQVLDLSTNGIDTLPPLAAALPALAELILDGNALRTLGDELARSSKLKKLSVKSNRI 226
            S+P+ +TG+K T QK+ +A+ TG+L+L +HGL E+P +++Q+  L+ L+++SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          +    ++   +  L  LP  ++KL L  N +  +  A  S L  LQVLDL+ NG   L  + + L  L +L LD NA+ T+  E+A   +LK LS+++NRI
Sbjct:    5 SKPQPRTGKKETRQKIDSAQKTGLLSLAQHGLGEIPPQVWQIDILKNLDISSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKLGIFFAADNRLESGVLAQLPAVVTKLILPRNCIAALGSA--SHLVKLQVLDLTANGCSCLDGIGS-LVGLVDLNLDDNAIETVPAEVASLKRLKILSLRNNRI 194

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BLAST of mRNA_F-serratus_M_contig6848.17899.1 vs. uniprot
Match: A0A8K1FJY8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJY8_PYTOL)

HSP 1 Score: 73.9 bits (180), Expect = 7.120e-12
Identity = 74/132 (56.06%), Postives = 94/132 (71.21%), Query Frame = 0

Query:   34 SQPKNKTGRKVTAQKMKTARATGVLALQEHGLKEVPEELFQLVNLRTLNLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLSALLALTDLSAGGNSLRGAEALGSLPPSLSKLSLRDNRLGEVPFAVLS 165
            S+PKN   R V  QK++TA++TG+LAL E  LK+VP E+ +L  LR+L+L+ XXXXXXXXXXXXXXXXXXXXXXXXX     DLS L ALT L   GNS+       +LPP+L+KLSL+ N+L  +P  + S
Sbjct:   17 SKPKN--NRNVQNQKIQTAKSTGMLALPERKLKKVPAEVLELTQLRSLDLSXXXXXXXXXXXXXXXXXXXXXXXXXXLTTLPDLSGLTALTTLVLDGNSIESLP--NALPPNLTKLSLKGNKLSAIPQTITS 144

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BLAST of mRNA_F-serratus_M_contig6848.17899.1 vs. uniprot
Match: A0A7S2HXS7_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HXS7_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 2.340e-11
Identity = 53/171 (30.99%), Postives = 81/171 (47.37%), Query Frame = 0

Query:   33 GSQPKNKTGRKVTAQKMKTARATGVLALQEHGLKEVPEELFQLVNLRTLNLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----DLSALLALTDLSAGGNSL------------RGAEAL-GSLPPSLSKLSLRDNRLGEVPFAVLSG-LPALQVLDLSTNGIDTLPP 185
            GSQPKNKTG+KV  QK++ ++ TGVL+L+EH L  +P ++F + NL +L++++                                   +S L  L +LSAG N L            +  E+L  +LP SL  + L +N    +P  + S  L  L  LD S N + ++PP
Sbjct:    5 GSQPKNKTGKKVLTQKLENSKKTGVLSLREHKLDTIPNQVFDITNLTSLDVSTNNLKTLGEPTKISKLSNLKSFNCEDNKLQAGTLSSISTLTKLQNLSAGSNQLGKPLVLVVDEQRKTIESLPNTLPSSLKSIKLDNNSFSAIPPQICSSKLTKLVKLDFSKNNLASIPP 175

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig6848.17899.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig6848.17899.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LLP4_ECTSI	5.530e-85	78.85	Leucine rich repeat protein n=2 Tax=Ectocarpus Tax...	[more]
A0A7S2EAS0_TRICV	6.290e-17	33.00	Hypothetical protein n=1 Tax=Trieres chinensis Tax...	[more]
A0A6T7I766_9STRA	6.390e-15	51.22	Hypothetical protein (Fragment) n=1 Tax=Attheya se...	[more]
A0A7S2PXK3_9STRA	4.720e-14	33.33	Hypothetical protein (Fragment) n=2 Tax=Skeletonem...	[more]
A0A225UJM0_9STRA	1.000e-13	54.60	Putative LRR protein n=1 Tax=Phytophthora megakary...	[more]
A0A5D6XNJ4_9STRA	2.080e-13	36.65	Uncharacterized protein n=1 Tax=Pythium brassicum ...	[more]
H3GRI1_PHYRM	5.940e-13	60.31	Uncharacterized protein n=3 Tax=Phytophthora TaxID...	[more]
A0A7S2GV98_9STRA	2.270e-12	45.60	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A8K1FJY8_PYTOL	7.120e-12	56.06	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A7S2HXS7_9STRA	2.340e-11	30.99	Hypothetical protein n=1 Tax=Helicotheca tamesis T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00364	LRR_bac_2	coord: 143..162 e-value: 30.0 score: 10.0 coord: 190..209 e-value: 500.0 score: 0.7 coord: 75..94 e-value: 100.0 score: 6.0 coord: 167..186 e-value: 260.0 score: 2.9 coord: 98..117 e-value: 13.0 score: 12.9
None	No IPR available	PANTHER	PTHR16083	LEUCINE RICH REPEAT CONTAINING PROTEIN	coord: 36..185
None	No IPR available	PANTHER	PTHR16083:SF23	FI16115P1	coord: 36..185 coord: 142..226
None	No IPR available	PANTHER	PTHR16083	LEUCINE RICH REPEAT CONTAINING PROTEIN	coord: 142..226
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 57..228
IPR003591	Leucine-rich repeat, typical subtype	SMART	SM00369	LRR_typ_2	coord: 190..213 e-value: 3.1 score: 16.8 coord: 98..120 e-value: 8.6 score: 13.8 coord: 167..189 e-value: 3.5 score: 16.6 coord: 75..96 e-value: 7.6 score: 14.2 coord: 144..166 e-value: 110.0 score: 4.9
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10		coord: 148..249 e-value: 5.4E-17 score: 63.2
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10		coord: 4..147 e-value: 2.5E-19 score: 71.2
IPR001611	Leucine-rich repeat	PFAM	PF13855	LRR_8	coord: 58..111 e-value: 1.6E-7 score: 30.9 coord: 144..203 e-value: 6.3E-11 score: 41.9
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 77..98 score: 6.572
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 100..121 score: 7.335
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 169..190 score: 7.689
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 122..143 score: 5.001
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 145..168 score: 5.794
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 192..213 score: 5.155

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig6848	contig	F-serratus_M_contig6848:1619..6180 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig6848.17899.1	mRNA_F-serratus_M_contig6848.17899.1	Fucus serratus male	mRNA	F-serratus_M_contig6848 1619..6299 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig6848.17899.1 ID=prot_F-serratus_M_contig6848.17899.1|Name=mRNA_F-serratus_M_contig6848.17899.1|organism=Fucus serratus male|type=polypeptide|length=258bp
MGNNTSTSSHASTFSRGQGTSSNIRDALPSLPGSQPKNKTGRKVTAQKMK
TARATGVLALQEHGLKEVPEELFQLVNLRTLNLASNSLKILPTAIGTLTK
LKTMRLDSNKLEALPDLSALLALTDLSAGGNSLRGAEALGSLPPSLSKLS
LRDNRLGEVPFAVLSGLPALQVLDLSTNGIDTLPPLAAALPALAELILDG
NALRTLGDELARSSKLKKLSVKSNRIGARNPITGGSQSHKHFSQTLRWIR
WSWRATC*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003591	Leu-rich_rpt_typical-subtyp
IPR032675	LRR_dom_sf
IPR001611	Leu-rich_rpt