prot_F-serratus_M_contig6848.17900.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6848.17900.1
Unique Nameprot_F-serratus_M_contig6848.17900.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length198
Homology
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BLAST of mRNA_F-serratus_M_contig6848.17900.1 vs. uniprot
Match: A0A6H5KP54_9PHAE (CULT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP54_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 6.250e-22
Identity = 62/88 (70.45%), Postives = 67/88 (76.14%), Query Frame = 0 
Query:   99 GTTGNDIAPAS---LVAALPTPATHAYLGEATTGST-LSRKDLEVGSTVEMPILSLPGVVLFPGESLPLRLHN-AHATLAQSMLAGEA 181
            G   N  +P S     A LPTPATHAYLGEATTGS+ LSRKDLE GSTVE+PIL+LPGVVLFPGESLPLRLHN A+A L  S L G A
Sbjct:   91 GINSNTESPPSSXXXXAPLPTPATHAYLGEATTGSSSLSRKDLEEGSTVEIPILALPGVVLFPGESLPLRLHNPAYADLVGSFLGGGA 178
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BLAST of mRNA_F-serratus_M_contig6848.17900.1 vs. uniprot
Match: D8LLP2_ECTSI (Protein cereblon n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLP2_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 3.990e-19
Identity = 52/64 (81.25%), Postives = 57/64 (89.06%), Query Frame = 0 
Query:  118 ATHAYLGEATTGST-LSRKDLEVGSTVEMPILSLPGVVLFPGESLPLRLHN-AHATLAQSMLAG 179
            ATHAYLGEATTGS+ LSRKDLE GSTVE+PIL+LPGVVLFPGESLPLRLHN A+A L +S L G
Sbjct:   54 ATHAYLGEATTGSSSLSRKDLEEGSTVEIPILALPGVVLFPGESLPLRLHNPAYADLVESFLGG 117
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6848.17900.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KP54_9PHAE6.250e-2270.45CULT domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LLP2_ECTSI3.990e-1981.25Protein cereblon n=1 Tax=Ectocarpus siliculosus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.130.40coord: 125..186
e-value: 1.1E-6
score: 30.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6848contigF-serratus_M_contig6848:9286..12373 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6848.17900.1mRNA_F-serratus_M_contig6848.17900.1Fucus serratus malemRNAF-serratus_M_contig6848 8966..13715 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6848.17900.1 ID=prot_F-serratus_M_contig6848.17900.1|Name=mRNA_F-serratus_M_contig6848.17900.1|organism=Fucus serratus male|type=polypeptide|length=198bp
MGDDSLWGGGPEETEIVWFGGSAPPQQQQQQQHPTPPSARPRSDDDLDNI
IRSGMSNNSDSGSSSSGRSGSDDGMQDDERELQPQEVIVPQPTFQREPGT
TGNDIAPASLVAALPTPATHAYLGEATTGSTLSRKDLEVGSTVEMPILSL
PGVVLFPGESLPLRLHNAHATLAQSMLAGEARRTHGDQGQASRHLEW*
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