prot_F-serratus_M_contig1236.1788.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1236.1788.1
Unique Nameprot_F-serratus_M_contig1236.1788.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length132
Homology
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BLAST of mRNA_F-serratus_M_contig1236.1788.1 vs. uniprot
Match: D7FK75_ECTSI (Ubiquitin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK75_ECTSI)

HSP 1 Score: 108 bits (269), Expect = 1.050e-24
Identity = 58/129 (44.96%), Postives = 82/129 (63.57%), Query Frame = 0 
Query:    2 YVSLYYKLLFKIAARHPPFLDRLRNSNSLHWCLESFLLRGHCPTLEMATTLISIVELCLHRYGLPFAMEAITWVIGSPAITPSLKVTRHDTNVQVPLYALWMLEVCLRH-----QLGNEGMGAVELFIR 125
            Y S+YY LL K    +P FL+ +++++SL W +E FLLRG+ P+ +MATTL+SI  LCL +YG  +A  A++W +G  A    LKV     N ++PLYALWM+E C+R        G EG  A+E FI+
Sbjct: 3492 YSSMYYDLLLKGCLLYPSFLEAVKSASSLIWSMEWFLLRGYAPSFKMATTLMSIFTLCLRKYGAGYASHALSWTLGPHAKEVYLKVG-DGPNPRLPLYALWMIEACVRRPQSGWDSGPEG-DAMETFIK 3618
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BLAST of mRNA_F-serratus_M_contig1236.1788.1 vs. uniprot
Match: A0A6H5KF55_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF55_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 2.620e-24
Identity = 57/129 (44.19%), Postives = 82/129 (63.57%), Query Frame = 0 
Query:    2 YVSLYYKLLFKIAARHPPFLDRLRNSNSLHWCLESFLLRGHCPTLEMATTLISIVELCLHRYGLPFAMEAITWVIGSPAITPSLKVTRHDTNVQVPLYALWMLEVCLRH-----QLGNEGMGAVELFIR 125
            Y S+YY LL K    +P FL+ +++++SL W +E FLLRG+ P+ +MATTL+SI  LCL +YG  ++  A++W +G  A    LKV     N ++PLYALWM+E C+R        G EG  A+E FI+
Sbjct: 1935 YSSMYYDLLLKGCLLYPSFLEAVKSASSLIWSMEWFLLRGYAPSFKMATTLMSIFTLCLRKYGAGYSSHALSWTLGPHAKEVYLKVG-DGPNPRLPLYALWMIEACVRRPQSGWDSGPEG-DAMETFIK 2061
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1236.1788.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FK75_ECTSI1.050e-2444.96Ubiquitin domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KF55_9PHAE2.620e-2444.19USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1236contigF-serratus_M_contig1236:44802..46162 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1236.1788.1mRNA_F-serratus_M_contig1236.1788.1Fucus serratus malemRNAF-serratus_M_contig1236 43185..46162 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1236.1788.1 ID=prot_F-serratus_M_contig1236.1788.1|Name=mRNA_F-serratus_M_contig1236.1788.1|organism=Fucus serratus male|type=polypeptide|length=132bp
MYVSLYYKLLFKIAARHPPFLDRLRNSNSLHWCLESFLLRGHCPTLEMAT
TLISIVELCLHRYGLPFAMEAITWVIGSPAITPSLKVTRHDTNVQVPLYA
LWMLEVCLRHQLGNEGMGAVELFIRTERSLDQ
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