mRNA_F-serratus_M_contig6835.17885.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig6835.17885.1
Unique NamemRNA_F-serratus_M_contig6835.17885.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig6835.17885.1 vs. uniprot
Match: D7FIV2_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV2_ECTSI)

HSP 1 Score: 342 bits (876), Expect = 4.640e-108
Identity = 170/233 (72.96%), Postives = 190/233 (81.55%), Query Frame = 1 
Query:    1 LVNRLADDLLEGKGFLATSKSLQKAYSATYFKLHRSYVSLVNHRVSQLKGLLGQDVDVGQIPKFGHIGDPLGFNSSHPSAHYLRDIWHKWFYEIPVLQDDGRVWTREDYLQRRAQLVDGRLLAGDASFKYAKVIRLPTGSDGTRARPVYGIFTIMNEYDQVVFSKAMKTASVHDLKNDLKMTFVNRFLGHGFELPVILFTDECCEDRKLLLVMFQEVLAETGVRLYDAADDDG 699
            +V+RLADDLLEG GF A SKSL   Y A YF   RSYVSL N  VS+ KG+   +VD+G IPKF  IGDP GF+SS PSAHYL DIWHK FYE PV+Q DG  WTRE+YLQRRAQLVDG  LAGDASFKYAKVIRL  G+DGTRARPV+GIFTIMNEYDQVVFSKAM TASVHDLKNDLKM FV RFLGHGF+LPVI ++DECC+DR+LLL MF+E+  ETG RLYD A++ G
Sbjct:  143 VVDRLADDLLEGTGFAAASKSLANTYHARYFNQLRSYVSLANRCVSRHKGMW-PNVDLGMIPKFSSIGDPSGFHSSPPSAHYLGDIWHKGFYETPVVQADGCSWTREEYLQRRAQLVDGCSLAGDASFKYAKVIRLSAGADGTRARPVHGIFTIMNEYDQVVFSKAMTTASVHDLKNDLKMMFVKRFLGHGFKLPVIFYSDECCDDRQLLLTMFKEIELETGARLYDTAEEAG 374
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BLAST of mRNA_F-serratus_M_contig6835.17885.1 vs. uniprot
Match: A0A6H5JCK3_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK3_9PHAE)

HSP 1 Score: 225 bits (573), Expect = 3.090e-69
Identity = 110/138 (79.71%), Postives = 117/138 (84.78%), Query Frame = 1 
Query:  205 DPLGFNSSHPSAHYLRDIWHKWFYEIPVLQDDGRVWTRED------YLQRRAQLVDGRLLAGDASFKYAKVIRLPTGSDGTRARPVYGIFTIMNEYDQVVFSKAMKTASVHDLKNDLKMTFVNRFLGHGFELPVILFT 600
            DPLG N  HPSAHYL DIWHKWFYE+P++    + W   D      YLQRRAQLVDGRLLAGDASFKYAKVIRLPTG DGTRARPVYGIFTIMNEYDQVVFSKAMKTASVHDLK+DLKM FV RF+GHGF+LPVILFT
Sbjct:    3 DPLGLNRRHPSAHYLGDIWHKWFYEMPMV----KTWVTTDALGHVNYLQRRAQLVDGRLLAGDASFKYAKVIRLPTGPDGTRARPVYGIFTIMNEYDQVVFSKAMKTASVHDLKSDLKMMFVQRFVGHGFKLPVILFT 136
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BLAST of mRNA_F-serratus_M_contig6835.17885.1 vs. uniprot
Match: A0A6H5K4D4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4D4_9PHAE)

HSP 1 Score: 232 bits (592), Expect = 8.300e-68
Identity = 125/217 (57.60%), Postives = 149/217 (68.66%), Query Frame = 1 
Query:   55 SKSLQKAYSATYFKLHRSYVSLVNHRVSQLKGLLGQDVDVGQIPKFGHIGDPLGFNSSHPSAHYLRDIWHKWFYEIPVLQDDGRVWTREDYLQRRAQLVDGRLLAGDASFKYAKVIRLPTGSDGTRARPVYGIFTIMNEYDQVVFSKAMKTASVHDLKNDLKMTFVNRFLGHGFELPVILFTDECCEDRKLLLVMFQEVLAETGVRLYDAADDDGVD 705
            SKSL +AY++ YF   RSYVSL    +S+ +GL GQ  +   +PKF   GDP G+NSS PSAH+L DIW+KWFYE PV+Q                 LV   +L      KYAKVIRL TG DGTRA PVYGIFTIMNEYDQVVFSKAM TASV+DLKND KM FV   +GHGF LPVI ++D CCEDR+LLL MF+E+ +E  VRLYDAA +  ++
Sbjct:  297 SKSLAQAYNSRYFSQMRSYVSLAKKGISKYRGLYGQQSNP-DVPKFAGTGDPSGYNSSSPSAHHLADIWNKWFYETPVVQ-----------------LV---MLPS----KYAKVIRLATGEDGTRALPVYGIFTIMNEYDQVVFSKAMSTASVYDLKNDPKMLFVKCVVGHGFTLPVIFYSDGCCEDRQLLLWMFKEIESENHVRLYDAAAEGAIE 488
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BLAST of mRNA_F-serratus_M_contig6835.17885.1 vs. uniprot
Match: D7FVB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVB4_ECTSI)

HSP 1 Score: 199 bits (505), Expect = 2.490e-60
Identity = 104/241 (43.15%), Postives = 157/241 (65.15%), Query Frame = 1 
Query:    1 LVNRLADDLLEGKGFLATSKSLQKAYSATYFKLHRSYVSLVNHRVSQLKGLLGQDVDVGQIP-KFGHIGDPLGFNSSHPSAHYLRDIWHKWFYEIPVLQDDGRVWTREDYLQRRAQLVDGRLLAGDASFKYAKVIRLPTGSDGTRARPVYGIFTIMNEYDQVVFSKAMKTASVHDLKNDLKMTFVNRFLGHGFELPVILFTDECCEDRKLLLVMFQEVLAETGVRLYDAADDDGVDGGVVL 720
            +V+RLADDL+ GKGF A +K++ +A++  +      Y SLVN R +   G+  +  ++ + P +FG   D   +  + PS HYLRD+W  +F ++PVL+ DG  WT E+Y  R  Q  DG +L GDASFK+AK+IRL   +   R+RPVYG+FT+ NEY+QVV+ + MKT ++ +L  +LK+ F+ RF+ +GF++P +  TD+CC+DR+LL  +F+E    T + LY    +D VD GV L
Sbjct:    1 MVDRLADDLVHGKGFSAAAKNICQAHTTKFMVDQLKYTSLVNSRRTS-SGIF-RSANLAKTPERFGSFDDSTKYGGAVPSEHYLRDVWRLYFSKLPVLEVDGVSWTLEEYQHRLMQRWDGEVLGGDASFKFAKIIRLGARAGEERSRPVYGLFTVFNEYEQVVWQRPMKTGALSELVEELKLFFM-RFVRNGFKVPTLWNTDDCCDDRQLLQRVFREFEEATWISLYL---EDEVDAGVQL 235
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BLAST of mRNA_F-serratus_M_contig6835.17885.1 vs. uniprot
Match: A0A6H5K4A9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A9_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 2.810e-54
Identity = 100/239 (41.84%), Postives = 150/239 (62.76%), Query Frame = 1 
Query:    1 LVNRLADDLLEGKGFLATSKSLQKAYSATYFKLHRSYVSLVNHRVSQLKGLLGQDVDVGQIP-KFGHIGDPLGFNSSHPSAHYLRDIWHKWFYEIPVLQDDGRVWTREDYLQRRAQLVDGRLLAGDASFKYAKVIRLPTGSDGTRARPVYGIFTIMNEYDQVVFSKAMKTASVHDLKNDLKMTFVNRFLGHGFELPVILFTDECCEDRKLLLVMFQEVLAETGVRLYDAADDDGVDGGV 714
            +V RLADDL+ GKGF A +K++ +A++  +      Y SLVN R +   G+  +  ++ + P +FG   D   +  + PS HYLRD+   +F ++PVL+ D   WT E+Y  R  Q  DG +L GDASFK+AK+IRL   +   R RPVYG FT+ NE +QVV+ + MKT ++ +L  +LK+ F+ RF+ + F++P +  T +CC+DR+LL  + +E   ETG+RLY    +D VD GV
Sbjct:   68 MVGRLADDLVRGKGFSAAAKNILQAHTTKFMVDQLKYTSLVNTRRTS-SGIF-RSANLAKTPERFGSFDDSTKYGGAVPSEHYLRDVRRFYFSKLPVLEVDSVDWTLEEYQHRLMQRWDGDILGGDASFKFAKIIRLGAKAGEERTRPVYGFFTVFNECEQVVWQRLMKTGALSELAEELKLLFM-RFVRNDFKVPTLWNTHDCCDDRQLLQRILREFEEETGIRLYR---EDEVDAGV 300
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BLAST of mRNA_F-serratus_M_contig6835.17885.1 vs. uniprot
Match: A0A6H5JYR4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYR4_9PHAE)

HSP 1 Score: 176 bits (446), Expect = 4.960e-48
Identity = 83/117 (70.94%), Postives = 99/117 (84.62%), Query Frame = 1 
Query:  355 GRLLAGDASFKYAKVIRLPTGSDGTRARPVYGIFTIMNEYDQVVFSKAMKTASVHDLKNDLKMTFVNRFLGHGFELPVILFTDECCEDRKLLLVMFQEVLAETGVRLYDAADDDGVD 705
            G +  GDASFKYAKVIRL TG DGTRARPVY IFTIMNEY+QV+FSK M TASV+DLKNDLKM FV RF+GHGF+LPVI ++D+CCEDR+LLL MF+E+ +E  VRLYDAA +  ++
Sbjct:   10 GHVKTGDASFKYAKVIRLATGEDGTRARPVYEIFTIMNEYNQVIFSKVMSTASVYDLKNDLKMLFVKRFVGHGFKLPVIFYSDDCCEDRQLLLSMFKEIESEDHVRLYDAAAEGAIE 126
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BLAST of mRNA_F-serratus_M_contig6835.17885.1 vs. uniprot
Match: A0A6H5KDX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX0_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 5.230e-48
Identity = 96/241 (39.83%), Postives = 139/241 (57.68%), Query Frame = 1 
Query:    1 LVNRLADDLLEGKGFLATSKSLQKAYSATYFKLHRSYVSLVNHRVSQLKGLLGQDVDVGQIP-KFGHIGDPLGFNSSHPSAHYLRDIWHKWFYEIPVLQDDGRVWTREDYLQRRAQLVDGRLLAGDASFKYAKVIRLPTGSDGTRARPVYGIFTIMNEYDQVVFSKAMKTASVHDLKNDLKMTFVNRFLGHGFELPVILFTDECCEDRKLLLVMFQEVLAETGVRLYDAADDDGVDGGVVL 720
            +VNRLADDL+ GK F A +K++++A++  +      Y SLVN R +   G+  +  ++   P +FG   D   +  + PS HYLRD+W  +F ++PVL+ D   WT E+Y  R  Q  DG +L GDASFK+AK+IRL   +   R RPVYG FT+ NEY+Q+ F                      RF+ +GF++P +  TD+CC+DR+LL  +F+E    TG+ LY    +D VD GV L
Sbjct:  174 MVNRLADDLVHGKDFSAAAKNIRQAHTTKFMVDQLKYTSLVNTRRTS-SGIF-RSANLANTPERFGSFDDSTKYGGAVPSEHYLRDVWRLYFPKLPVLEVDSVDWTLEEYQHRLMQRWDGDILGGDASFKFAKIIRLGAKAGEERTRPVYGFFTVFNEYEQLFFM---------------------RFVRNGFKVPTLWNTDDCCDDRQLLQRIFREFEEVTGISLYL---EDEVDAGVQL 388
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BLAST of mRNA_F-serratus_M_contig6835.17885.1 vs. uniprot
Match: A0A6H5JQG2_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQG2_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 3.070e-47
Identity = 102/266 (38.35%), Postives = 152/266 (57.14%), Query Frame = 1 
Query:    1 LVNRLADDLLEGKGFLATSKSLQKA-------------------------YSATYFKLHR-SYVSLVNHRVSQLKGLLGQDVDVGQIPKFGHIGDPLGFNSSHPSAHYLRDIWHKWFYEIPVLQDDGRVWTREDYLQRRAQLVDGRLLAGDASFKYAKVIRLPTGSDGTRARPVYGIFTIMNEYDQVVFSKAMKTASVHDLKNDLKMTFVNRFLGHGFELPVILFTDECCEDRKLLLVMFQEVLAETGVRLYDAADDDGVDGGVVL 720
            +V+RLADDL+ GKGF A +K++ +                             T F + +  Y SLVN R +   G+           +FG   D   +  + PS HYLRD+W  ++ ++PVL+ DG  WT E+Y  R  Q  DG +L+GDASFK+AK+IRL   +   R++PVYG+FT+ NEY+QVV+ + MKT ++ +L  +LK  F NRF+ +GF++  +  TD+CC+DR+LL  +F+E    TG+ L+    +D VD GV L
Sbjct:  208 MVDRLADDLVHGKGFSAAAKNICQVNVHFLICSVLKITXXXXXXXXXXXXXXTTKFMVDQLKYTSLVNSRRTS-SGIFRSANHAKTPERFGSFDDSTKYGGAVPSEHYLRDVWWLYYSKLPVLEVDGVGWTLEEYQHRLMQRWDGEVLSGDASFKFAKIIRLGARAGEERSKPVYGLFTVFNEYEQVVWQRPMKTGALSELVEELK-PFFNRFVRNGFKVFTLWNTDDCCDDRQLLQRVFREFEEATGISLHL---EDEVDAGVQL 468
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BLAST of mRNA_F-serratus_M_contig6835.17885.1 vs. uniprot
Match: A0A6H5KSM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM2_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 8.610e-42
Identity = 76/98 (77.55%), Postives = 83/98 (84.69%), Query Frame = 1 
Query:    1 LVNRLADDLLEGKGFLATSKSLQKAYSATYFKLHRSYVSLVNHRVSQLKGL--LGQDVDVGQIPKFGHIGDPLGFNSSHPSAHYLRDIWHKWFYEIPV 288
            L++RLADDLLEGKGF ATSKSLQ AY+ATYFKL+RSYVSL N RVSQLKGL  LG D DVG+IPKF  + D LGFNS HPSAHYL DIWHKWF E+PV
Sbjct:  169 LIDRLADDLLEGKGFAATSKSLQNAYTATYFKLYRSYVSLANRRVSQLKGLGLLGPDADVGKIPKFEEMADALGFNSRHPSAHYLGDIWHKWFDEMPV 266
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BLAST of mRNA_F-serratus_M_contig6835.17885.1 vs. uniprot
Match: A0A6H5KE68_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE68_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 9.950e-42
Identity = 79/162 (48.77%), Postives = 103/162 (63.58%), Query Frame = 1 
Query:    1 LVNRLADDLLEGKGFLATSKSLQKAYSATYFKLHRSYVSLVNHRVSQLKGLLGQDVDVGQIP-KFGHIGDPLGFNSSHPSAHYLRDIWHKWFYEIPVLQDDGRVWTREDYLQRRAQLVDGRLLAGDASFKYAKVIRLPTGSDGTRARPVYGIFTIMNEYDQV 483
            LV+RLADDL+ GKGF A +K +++A++  +      YVSL + R S    L G       +P KFG   D   +  + PS HYLRD+W  +F E+PVL+  G  WTREDYL    Q  DG +LAGDASFK+AK+IRL   + G R RPV+GIFT+ NEY+QV
Sbjct:   76 LVDRLADDLVHGKGFSAAAKYIRQAHTTKFMAFQLKYVSLADARRSSRVSLFG----AAPVPVKFGSFDDTEKYCGAVPSDHYLRDVWRTYFSELPVLEVKGVKWTREDYLHCVHQRWDGTVLAGDASFKFAKIIRLGATAHGERTRPVHGIFTVFNEYEQV 233
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6835.17885.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIV2_ECTSI4.640e-10872.963'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5JCK3_9PHAE3.090e-6979.713'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5K4D4_9PHAE8.300e-6857.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVB4_ECTSI2.490e-6043.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K4A9_9PHAE2.810e-5441.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYR4_9PHAE4.960e-4870.943'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5KDX0_9PHAE5.230e-4839.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQG2_9PHAE3.070e-4738.353'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5KSM2_9PHAE8.610e-4277.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KE68_9PHAE9.950e-4248.77Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6835contigF-serratus_M_contig6835:21037..22241 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score341.3
Seed ortholog evalue3.7e-91
Seed eggNOG ortholog2880.D7FIV2
Preferred nameWRN
KEGG koko:K10900,ko:K20777
Hectar predicted targeting categoryother localisation
GOsGO:0000018,GO:0000019,GO:0000217,GO:0000287,GO:0000400,GO:0000403,GO:0000405,GO:0000723,GO:0000724,GO:0000725,GO:0000731,GO:0000738,GO:0000781,GO:0001302,GO:0001325,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003682,GO:0003684,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006275,GO:0006281,GO:0006284,GO:0006302,GO:0006308,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0006996,GO:0007154,GO:0007275,GO:0007568,GO:0007569,GO:0008026,GO:0008094,GO:0008104,GO:0008150,GO:0008152,GO:0008156,GO:0008296,GO:0008297,GO:0008309,GO:0008310,GO:0008311,GO:0008408,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009267,GO:0009314,GO:0009378,GO:0009411,GO:0009416,GO:0009605,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010212,GO:0010225,GO:0010259,GO:0010332,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010941,GO:0015630,GO:0016043,GO:0016462,GO:0016604,GO:0016607,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016895,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0022607,GO:0030145,GO:0031297,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032200,GO:0032356,GO:0032357,GO:0032392,GO:0032501,GO:0032502,GO:0032508,GO:0033036,GO:0033365,GO:0033554,GO:0034504,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0040008,GO:0040009,GO:0042162,GO:0042592,GO:0042594,GO:0042623,GO:0042802,GO:0042803,GO:0042981,GO:0042995,GO:0043005,GO:0043067,GO:0043085,GO:0043138,GO:0043140,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044451,GO:0044464,GO:0044806,GO:0044877,GO:0045005,GO:0045910,GO:0045911,GO:0045934,GO:0045935,GO:0045950,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0046983,GO:0048478,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051276,GO:0051336,GO:0051345,GO:0051641,GO:0051716,GO:0051880,GO:0060249,GO:0060255,GO:0060542,GO:0061749,GO:0061820,GO:0061821,GO:0061849,GO:0062037,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070035,GO:0070336,GO:0070337,GO:0070727,GO:0071103,GO:0071214,GO:0071478,GO:0071479,GO:0071480,GO:0071496,GO:0071704,GO:0071840,GO:0071897,GO:0080090,GO:0090304,GO:0090305,GO:0090329,GO:0090656,GO:0090657,GO:0090737,GO:0097159,GO:0097458,GO:0098530,GO:0098687,GO:0104004,GO:0120025,GO:0140097,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902570,GO:1905773,GO:2000104,GO:2000112,GO:2000113
EggNOG free text desc.3'-5' exonuclease activity
EggNOG OGsKOG4373@1,KOG4373@2759
EC3.1.11.1,3.6.4.12
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03032,ko03400
Exons4
Model size720
Cds size720
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6835.17885.1prot_F-serratus_M_contig6835.17885.1Fucus serratus malepolypeptideF-serratus_M_contig6835 21037..22241 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932088.9529684-CDS-F-serratus_M_contig6835:21036..213301622932088.9529684-CDS-F-serratus_M_contig6835:21036..21330Fucus serratus maleCDSF-serratus_M_contig6835 21037..21330 +
1690964141.4989374-CDS-F-serratus_M_contig6835:21036..213301690964141.4989374-CDS-F-serratus_M_contig6835:21036..21330Fucus serratus maleCDSF-serratus_M_contig6835 21037..21330 +
1622932088.9673839-CDS-F-serratus_M_contig6835:21482..216681622932088.9673839-CDS-F-serratus_M_contig6835:21482..21668Fucus serratus maleCDSF-serratus_M_contig6835 21483..21668 +
1690964141.5164242-CDS-F-serratus_M_contig6835:21482..216681690964141.5164242-CDS-F-serratus_M_contig6835:21482..21668Fucus serratus maleCDSF-serratus_M_contig6835 21483..21668 +
1622932089.0770419-CDS-F-serratus_M_contig6835:21838..219591622932089.0770419-CDS-F-serratus_M_contig6835:21838..21959Fucus serratus maleCDSF-serratus_M_contig6835 21839..21959 +
1690964141.5294983-CDS-F-serratus_M_contig6835:21838..219591690964141.5294983-CDS-F-serratus_M_contig6835:21838..21959Fucus serratus maleCDSF-serratus_M_contig6835 21839..21959 +
1622932089.1526866-CDS-F-serratus_M_contig6835:22122..222411622932089.1526866-CDS-F-serratus_M_contig6835:22122..22241Fucus serratus maleCDSF-serratus_M_contig6835 22123..22241 +
1690964141.5413117-CDS-F-serratus_M_contig6835:22122..222411690964141.5413117-CDS-F-serratus_M_contig6835:22122..22241Fucus serratus maleCDSF-serratus_M_contig6835 22123..22241 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig6835.17885.1

>prot_F-serratus_M_contig6835.17885.1 ID=prot_F-serratus_M_contig6835.17885.1|Name=mRNA_F-serratus_M_contig6835.17885.1|organism=Fucus serratus male|type=polypeptide|length=240bp
LVNRLADDLLEGKGFLATSKSLQKAYSATYFKLHRSYVSLVNHRVSQLKG
LLGQDVDVGQIPKFGHIGDPLGFNSSHPSAHYLRDIWHKWFYEIPVLQDD
GRVWTREDYLQRRAQLVDGRLLAGDASFKYAKVIRLPTGSDGTRARPVYG
IFTIMNEYDQVVFSKAMKTASVHDLKNDLKMTFVNRFLGHGFELPVILFT
DECCEDRKLLLVMFQEVLAETGVRLYDAADDDGVDGGVVL
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mRNA from alignment at F-serratus_M_contig6835:21037..22241+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig6835.17885.1 ID=mRNA_F-serratus_M_contig6835.17885.1|Name=mRNA_F-serratus_M_contig6835.17885.1|organism=Fucus serratus male|type=mRNA|length=1205bp|location=Sequence derived from alignment at F-serratus_M_contig6835:21037..22241+ (Fucus serratus male)
CTGGTGAACCGTCTGGCAGATGACCTCCTCGAAGGGAAGGGCTTCCTGGC
GACTTCGAAGTCCCTTCAGAAGGCGTACTCTGCCACGTACTTCAAACTCC
ATCGTTCGTACGTATCGCTAGTCAACCACCGCGTGTCTCAACTGAAGGGT
TTGTTGGGGCAGGATGTTGACGTCGGCCAGATCCCAAAGTTTGGGCACAT
CGGAGACCCTTTGGGGTTTAACAGCAGCCATCCTTCGGCCCACTATCTGC
GAGACATCTGGCACAAGTGGTTCTACGAGATTCCTGTTTTACAGGTACGC
GAACCTTCGAGAATGTTTTTTTTTGTGTGCGTGTAGTTTGGCTTTGCAAA
TTTGAGACAAACAAAAGCCAGTGTGGGCACAGACGAAACAAAAATGCAAA
TGCCAACATCGTGTATGCAATCTCTGCTGTATCGTTGATCTTGTAGGATG
ACGGACGCGTGTGGACACGTGAGGATTATCTGCAGCGTCGAGCTCAGTTG
GTAGACGGCCGTCTGCTCGCGGGCGATGCTTCTTTCAAGTACGCCAAGGT
AATCCGACTGCCTACAGGGTCGGATGGGACGCGCGCACGGCCTGTGTACG
GGATATTCACCATCATGAATGAGTACGACCAGGTGAGAAATAATGTGTCG
CTCGTATGCGAGTATCAACGCAGTGTTCAATTCCAAGCGATTTAGAACCT
CACCAACTACATGCTGAACTATTTTGCTCGATTGCTCTTTTTGGAAAATG
TCTCATCCAGAACCCCCTGCCAACTCACTCTACGGCTGTCTCCATGTATT
AGGTTGTATTTTCGAAGGCCATGAAAACGGCATCAGTACACGATCTCAAG
AACGACCTCAAAATGACGTTTGTCAACCGCTTTCTTGGCCATGGCTTCGA
ACTCCCAGTGATCCTCTTCACAGGTACGACATCGTGTTGAGTTATACTAA
CTGTTTTGATTTTGCACACGAGCTTGCATTTCTTGTGTAATCTAATGCCG
ATTGTCTTCCCATGTCGACTCCGTTATTTTTTTCGCCGCTGCAAACTCTG
GCTGGTGTTTTTGTTGTAACTCTGTTCGTGTTGCAGACGAATGTTGTGAG
GATCGGAAACTTTTACTCGTGATGTTCCAAGAGGTTCTGGCTGAGACTGG
TGTCCGGTTGTACGATGCTGCGGATGATGATGGCGTAGATGGAGGGGTTG
TTCTT
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Coding sequence (CDS) from alignment at F-serratus_M_contig6835:21037..22241+

>mRNA_F-serratus_M_contig6835.17885.1 ID=mRNA_F-serratus_M_contig6835.17885.1|Name=mRNA_F-serratus_M_contig6835.17885.1|organism=Fucus serratus male|type=CDS|length=1440bp|location=Sequence derived from alignment at F-serratus_M_contig6835:21037..22241+ (Fucus serratus male)
CTGGTGAACCGTCTGGCAGATGACCTCCTCGAAGGGAAGGGCTTCCTGGC
GACTTCGAAGTCCCTTCAGAAGGCGTACTCTGCCACGTACTTCAAACTCC
ATCGTTCGTACGTATCGCTAGTCAACCACCGCGTGTCTCAACTGAAGGGT
TTGTTGGGGCAGGATGTTGACGTCGGCCAGATCCCAAAGTTTGGGCACAT
CGGAGACCCTTTGGGGTTTAACAGCAGCCATCCTTCGGCCCACTATCTGC
GAGACATCTGGCACAAGTGGTTCTACGAGATTCCTGTTTTACAGCTGGTG
AACCGTCTGGCAGATGACCTCCTCGAAGGGAAGGGCTTCCTGGCGACTTC
GAAGTCCCTTCAGAAGGCGTACTCTGCCACGTACTTCAAACTCCATCGTT
CGTACGTATCGCTAGTCAACCACCGCGTGTCTCAACTGAAGGGTTTGTTG
GGGCAGGATGTTGACGTCGGCCAGATCCCAAAGTTTGGGCACATCGGAGA
CCCTTTGGGGTTTAACAGCAGCCATCCTTCGGCCCACTATCTGCGAGACA
TCTGGCACAAGTGGTTCTACGAGATTCCTGTTTTACAGGATGACGGACGC
GTGTGGACACGTGAGGATTATCTGCAGCGTCGAGCTCAGTTGGTAGACGG
CCGTCTGCTCGCGGGCGATGCTTCTTTCAAGTACGCCAAGGTAATCCGAC
TGCCTACAGGGTCGGATGGGACGCGCGCACGGCCTGTGTACGGGATATTC
ACCATCATGAATGAGTACGACCAGGATGACGGACGCGTGTGGACACGTGA
GGATTATCTGCAGCGTCGAGCTCAGTTGGTAGACGGCCGTCTGCTCGCGG
GCGATGCTTCTTTCAAGTACGCCAAGGTAATCCGACTGCCTACAGGGTCG
GATGGGACGCGCGCACGGCCTGTGTACGGGATATTCACCATCATGAATGA
GTACGACCAGGTTGTATTTTCGAAGGCCATGAAAACGGCATCAGTACACG
ATCTCAAGAACGACCTCAAAATGACGTTTGTCAACCGCTTTCTTGGCCAT
GGCTTCGAACTCCCAGTGATCCTCTTCACAGGTTGTATTTTCGAAGGCCA
TGAAAACGGCATCAGTACACGATCTCAAGAACGACCTCAAAATGACGTTT
GTCAACCGCTTTCTTGGCCATGGCTTCGAACTCCCAGTGATCCTCTTCAC
AGACGAATGTTGTGAGGATCGGAAACTTTTACTCGTGATGTTCCAAGAGG
TTCTGGCTGAGACTGGTGTCCGGTTGTACGATGCTGCGGATGATGATGGC
GTAGATGGAGGGGTTGTTCTTACGAATGTTGTGAGGATCGGAAACTTTTA
CTCGTGATGTTCCAAGAGGTTCTGGCTGAGACTGGTGTCCGGTTGTACGA
TGCTGCGGATGATGATGGCGTAGATGGAGGGGTTGTTCTT
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