prot_F-serratus_M_contig6810.17875.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6810.17875.1
Unique Nameprot_F-serratus_M_contig6810.17875.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length79
Homology
BLAST of mRNA_F-serratus_M_contig6810.17875.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK)

HSP 1 Score: 77.4 bits (189), Expect = 8.150e-15
Identity = 38/71 (53.52%), Postives = 52/71 (73.24%), Query Frame = 0
Query:    6 VYNQVARLKDKLVIGTKMLYKQKIGQDDKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAVSIRMLLATAA 76
            V+ +V R +D+ +IG+K ++K K G D +VEKYK RLVAQGF QVEG+ Y E ++P   + SIR+LLA AA
Sbjct: 1026 VFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAA 1096          
BLAST of mRNA_F-serratus_M_contig6810.17875.1 vs. uniprot
Match: A0A1C7MSU6_GRIFR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Grifola frondosa TaxID=5627 RepID=A0A1C7MSU6_GRIFR)

HSP 1 Score: 72.0 bits (175), Expect = 6.320e-13
Identity = 35/71 (49.30%), Postives = 51/71 (71.83%), Query Frame = 0
Query:    6 VYNQVARLKDKLVIGTKMLYKQKIGQDDKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAVSIRMLLATAA 76
            +Y++V R +D+ V+G K +++ K G D ++EKYK R+VA+GF QVEGV YT+ ++P     SIR LLA AA
Sbjct:  313 LYDEVERPRDRKVVGCKWVFRIKRGPDGEIEKYKARVVAKGFTQVEGVDYTDTFAPVTKFASIRALLALAA 383          
BLAST of mRNA_F-serratus_M_contig6810.17875.1 vs. uniprot
Match: A0A060SSE0_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SSE0_PYCCI)

HSP 1 Score: 70.9 bits (172), Expect = 1.640e-12
Identity = 35/71 (49.30%), Postives = 51/71 (71.83%), Query Frame = 0
Query:    6 VYNQVARLKDKLVIGTKMLYKQKIGQDDKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAVSIRMLLATAA 76
            +Y++V R +++ V+  K +++ K G D K++KYK RLVA+GF QVEGV YT+ ++P     SIRMLLA AA
Sbjct:  995 LYDEVERPRNRKVVDCKWVFRIKHGPDGKIQKYKARLVAKGFTQVEGVDYTDTFAPVTKFASIRMLLAFAA 1065          
BLAST of mRNA_F-serratus_M_contig6810.17875.1 vs. uniprot
Match: A0A235B279_9BACL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paludifilum halophilum TaxID=1642702 RepID=A0A235B279_9BACL)

HSP 1 Score: 65.5 bits (158), Expect = 2.490e-12
Identity = 34/76 (44.74%), Postives = 48/76 (63.16%), Query Frame = 0
Query:    1 MVENCVYNQVARLKDKLVIGTKMLYKQKIGQDDKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAVSIRMLLATAA 76
            M +N ++  V R KDK VIGTK ++K K+ +D KV + K RLV +G+ Q EG+ Y E ++P      +R LLA AA
Sbjct:    1 MEKNKIWTLVPRPKDKNVIGTKWVFKNKLNEDGKVSRNKARLVCKGYSQEEGIDYRETFAPIARLEGVRTLLAYAA 76          
BLAST of mRNA_F-serratus_M_contig6810.17875.1 vs. uniprot
Match: A0A2R6NNP3_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6NNP3_9APHY)

HSP 1 Score: 68.9 bits (167), Expect = 7.460e-12
Identity = 33/71 (46.48%), Postives = 52/71 (73.24%), Query Frame = 0
Query:    6 VYNQVARLKDKLVIGTKMLYKQKIGQDDKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAVSIRMLLATAA 76
            ++++V   K++ V+G+K +++ K G + K+EKYK RLVAQGF QV+G+ YTE ++P    +SIR LL+ AA
Sbjct:   25 LFDEVECPKNRKVVGSKWVFRIKRGPNGKIEKYKARLVAQGFTQVKGIDYTETFAPVAKFISIRTLLSLAA 95          
BLAST of mRNA_F-serratus_M_contig6810.17875.1 vs. uniprot
Match: A0A8H7NTQ9_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Postia placenta TaxID=104341 RepID=A0A8H7NTQ9_9APHY)

HSP 1 Score: 68.9 bits (167), Expect = 7.750e-12
Identity = 33/71 (46.48%), Postives = 50/71 (70.42%), Query Frame = 0
Query:    6 VYNQVARLKDKLVIGTKMLYKQKIGQDDKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAVSIRMLLATAA 76
            +Y++V R +D+ V+  K ++K K G D +++KYK RLVA+GF QVEG+ +TE ++P     S+R LLA AA
Sbjct:  655 LYDEVERPRDRKVVDCKWVFKIKRGPDGEIKKYKARLVAKGFTQVEGIDFTETFAPVAKFASVRTLLALAA 725          
BLAST of mRNA_F-serratus_M_contig6810.17875.1 vs. uniprot
Match: A0A4Y9XTU1_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Fomitopsis rosea TaxID=34475 RepID=A0A4Y9XTU1_9APHY)

HSP 1 Score: 68.9 bits (167), Expect = 7.780e-12
Identity = 35/72 (48.61%), Postives = 51/72 (70.83%), Query Frame = 0
Query:    6 VYNQVARLKDKLVIGTKMLYKQKIGQDDKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAVSIRMLLATAAS 77
            +Y++V R +++ V+G K ++K K G D ++EKYK RLVA+GF QVE V Y E ++PT    +IR LLA AA+
Sbjct:  980 LYDEVERPRNRKVVGCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEDVDYDETFAPTTKFSTIRTLLALAAA 1051          
BLAST of mRNA_F-serratus_M_contig6810.17875.1 vs. uniprot
Match: A0A1M2VV58_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VV58_TRAPU)

HSP 1 Score: 68.6 bits (166), Expect = 1.070e-11
Identity = 33/71 (46.48%), Postives = 49/71 (69.01%), Query Frame = 0
Query:    6 VYNQVARLKDKLVIGTKMLYKQKIGQDDKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAVSIRMLLATAA 76
            +Y++V + + + V+G K ++K K G D  +EKYK RLVA+GF QVEG+ YT+ ++P     SIR +LA AA
Sbjct: 1020 LYDEVEKPRGRKVVGCKWVFKIKRGPDGSIEKYKARLVAKGFTQVEGIDYTDTFAPVSKFASIRTVLALAA 1090          
BLAST of mRNA_F-serratus_M_contig6810.17875.1 vs. uniprot
Match: A0A060SUY4_PYCCI (Uncharacterized protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SUY4_PYCCI)

HSP 1 Score: 67.8 bits (164), Expect = 1.980e-11
Identity = 33/70 (47.14%), Postives = 48/70 (68.57%), Query Frame = 0
Query:    7 YNQVARLKDKLVIGTKMLYKQKIGQDDKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAVSIRMLLATAA 76
            Y++V R +++ V+G K +++ K G D  VE+YK RLVAQGF QVEG+ Y+E ++P     SIR +L  AA
Sbjct:  962 YDEVERPQNRKVVGCKWVFRLKRGADGSVERYKARLVAQGFTQVEGIDYSEMFAPVSKFASIRTVLTLAA 1031          
BLAST of mRNA_F-serratus_M_contig6810.17875.1 vs. uniprot
Match: A0A0J7K7I2_LASNI (Retrovirus-related pol polyprotein from transposon tnt 1-94 n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K7I2_LASNI)

HSP 1 Score: 67.0 bits (162), Expect = 3.570e-11
Identity = 32/76 (42.11%), Postives = 52/76 (68.42%), Query Frame = 0
Query:    1 MVENCVYNQVARLKDKLVIGTKMLYKQKIGQDDKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAVSIRMLLATAA 76
            +++N  +    R  D +VIG++M+ + K+G D+K+E+ K RLVAQGF+Q  GVH++E ++P     SIR++ A AA
Sbjct:    8 IIKNDTWELDERPDDSIVIGSRMVLRNKLGPDNKLERRKARLVAQGFYQQPGVHFSETFAPVARLGSIRLIAALAA 83          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6810.17875.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0C2WN23_AMAMK8.150e-1553.52Integrase catalytic domain-containing protein (Fra... [more]
A0A1C7MSU6_GRIFR6.320e-1349.30Retrovirus-related Pol polyprotein from transposon... [more]
A0A060SSE0_PYCCI1.640e-1249.30Integrase catalytic domain-containing protein n=1 ... [more]
A0A235B279_9BACL2.490e-1244.74Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2R6NNP3_9APHY7.460e-1246.48Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8H7NTQ9_9APHY7.750e-1246.48Integrase catalytic domain-containing protein n=1 ... [more]
A0A4Y9XTU1_9APHY7.780e-1248.61Integrase catalytic domain-containing protein n=1 ... [more]
A0A1M2VV58_TRAPU1.070e-1146.48Retrovirus-related Pol polyprotein from transposon... [more]
A0A060SUY4_PYCCI1.980e-1147.14Uncharacterized protein n=1 Tax=Pycnoporus cinnaba... [more]
A0A0J7K7I2_LASNI3.570e-1142.11Retrovirus-related pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 6..76
e-value: 6.2E-14
score: 52.2
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 14..77
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 14..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6810contigF-serratus_M_contig6810:18757..18993 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6810.17875.1mRNA_F-serratus_M_contig6810.17875.1Fucus serratus malemRNAF-serratus_M_contig6810 18757..18993 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6810.17875.1 ID=prot_F-serratus_M_contig6810.17875.1|Name=mRNA_F-serratus_M_contig6810.17875.1|organism=Fucus serratus male|type=polypeptide|length=79bp
MVENCVYNQVARLKDKLVIGTKMLYKQKIGQDDKVEKYKCRLVAQGFWQV
EGVHYTEKYSPTPSAVSIRMLLATAASG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like