mRNA_F-serratus_M_contig6809.17868.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig6809.17868.1 vs. uniprot
Match: D7FSX8_ECTSI (Ubiquitin carboxyl-terminal hydrolase 64E n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSX8_ECTSI) HSP 1 Score: 108 bits (270), Expect = 3.950e-25 Identity = 67/182 (36.81%), Postives = 85/182 (46.70%), Query Frame = 1
Query: 1 EPLTGDSQYFCYNCEQKKDAFRSQYPATVPPVLMFSLNRLDSFSADGDRTKAHEAFKYPLVLDMEPFLNGQAWAESARSHDS-------------------------------------------SKTGQ------------------------GGGTLYDLQAVVVHRGSADSGHYHALIR 345
E L+GD++YFC C++K+DA RSQ +PPVL+FSLNR + +R K + FKYPL LDMEPF+ G+AW+ + S +S S GQ GGG +Y+L AVVVHRGSA SGHYHALIR
Sbjct: 322 ERLSGDNKYFCDQCQEKQDALRSQTLRALPPVLIFSLNRFEFDFETMERVKVKQEFKYPLTLDMEPFVEGRAWSGNDNSDESQVPDLAGDPEVPGTCRNRQKWVPQAWNDAQAEAITLQTSLAATSDPGQASKFDGDGGRAGGIGDGLRREEDEGGGLVYELLAVVVHRGSAYSGHYHALIR 503
BLAST of mRNA_F-serratus_M_contig6809.17868.1 vs. uniprot
Match: A0A835YZ71_9STRA (USP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ71_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 1.030e-20 Identity = 49/115 (42.61%), Postives = 63/115 (54.78%), Query Frame = 1
Query: 1 EPLTGDSQYFCYNCEQKKDAFRSQYPATVPPVLMFSLNRLDSFSADGDRTKAHEAFKYPLVLDMEPFLNGQAWAESARSHDSSKTGQGGGTLYDLQAVVVHRGSADSGHYHALIR 345
E + G++QY+C C++K D R Q +PP+L+FSLNR +R K F++PLVLD PF+N Q LYDL VV+HRGSA SGHYHA IR
Sbjct: 186 EAMVGENQYWCERCDRKVDGERRQMLRELPPLLVFSLNRFQFDMKTMERVKVSAKFEFPLVLDTAPFVNDQDG------------------LYDLLGVVLHRGSAYSGHYHAYIR 282
BLAST of mRNA_F-serratus_M_contig6809.17868.1 vs. uniprot
Match: A0A1Y1IFY9_KLENI (Ubiquitin carboxyl-terminal hydrolase 7 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IFY9_KLENI) HSP 1 Score: 93.2 bits (230), Expect = 9.800e-20 Identity = 49/122 (40.16%), Postives = 68/122 (55.74%), Query Frame = 1
Query: 1 EPLTGDSQYFCYNCEQKKDAFRSQYPATVPPVLMFSLNRLDSFSADGDRTKAHEAFKYPLVLDMEPFLNGQAWAESARSHDSSKTGQ-------GGGTLYDLQAVVVHRGSADSGHYHALIR 345
E L GD+QYFC C+ K DA RSQ ++PP+L L R + +R K F +PL L++ P++ + +HD++ G GG L+DL +VV+H GSA SGHYHA IR
Sbjct: 422 EMLDGDNQYFCERCQAKVDAQRSQRFRSLPPLLTLPLCRFEYDWDRDERRKITTPFSFPLTLNLAPYMAPPSSDGQPANHDAAANGSAGAPGGPGGAALFDLLSVVIHSGSAHSGHYHAYIR 543
BLAST of mRNA_F-serratus_M_contig6809.17868.1 vs. uniprot
Match: A0A6H5JBL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBL7_9PHAE) HSP 1 Score: 92.8 bits (229), Expect = 1.240e-19 Identity = 41/82 (50.00%), Postives = 57/82 (69.51%), Query Frame = 1
Query: 1 EPLTGDSQYFCYNCEQKKDAFRSQYPATVPPVLMFSLNRLDSFSADGDRTKAHEAFKYPLVLDMEPFLNGQAWAESARSHDS 246
E L+GD++YFC C++K+DA RSQ +PPVL+FSLNR + +R K + FKYPL LDMEPF+ G+AW+ + S +S
Sbjct: 243 ERLSGDNKYFCDQCQEKQDALRSQTLRALPPVLIFSLNRFEFDFETMERVKVKQEFKYPLTLDMEPFVEGRAWSGNDNSDES 324
BLAST of mRNA_F-serratus_M_contig6809.17868.1 vs. uniprot
Match: A0A8B7Z9Y1_ACAPL (Ubiquitinyl hydrolase 1 n=8 Tax=Valvatida TaxID=41166 RepID=A0A8B7Z9Y1_ACAPL) HSP 1 Score: 85.1 bits (209), Expect = 6.740e-17 Identity = 46/123 (37.40%), Postives = 67/123 (54.47%), Query Frame = 1
Query: 1 EPLTGDSQYFCYNCEQKKDAFRSQYPATVPPVLMFSLNRLDSFSADGDRTKAHEAFKYPLVLDMEPF-LNGQAWAESARSHDSSKTGQGGGT-------LYDLQAVVVHRGSADSGHYHALIR 345
E L GD+ YFC C +K++ + T+PPVL+ L R D G K + FK+P VLDMEP+ + G A ES +S ++S + LY L V+VH G A++GHY++ I+
Sbjct: 1814 ELLDGDNAYFCEKCNEKRNTIKRMCIKTLPPVLVIQLKRFDYDWEAGRALKFDDYFKFPWVLDMEPYTVKGMARRESPQSDEASSGEMPDNSQPHTMEDLYHLVGVIVHSGQANAGHYYSFIK 1936
BLAST of mRNA_F-serratus_M_contig6809.17868.1 vs. uniprot
Match: A0A0L0DDM4_THETB (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DDM4_THETB) HSP 1 Score: 79.0 bits (193), Expect = 9.390e-15 Identity = 45/115 (39.13%), Postives = 59/115 (51.30%), Query Frame = 1
Query: 1 EPLTGDSQYFCYNCEQKKDAFRSQYPATVPPVLMFSLNRLDSFSADGDRTKAHEAFKYPLVLDMEPFLNGQAWAESARSHDSSKTGQGGGTLYDLQAVVVHRGSADSGHYHALIR 345
E LTGD+QY C CE K DA + +PPVL F L R R K ++ +PLVLDM P++ A+S + LYD AV++H GSA SGHY A ++
Sbjct: 262 ERLTGDNQYACSGCETKVDADKGLTFGDLPPVLSFQLKRFVYDWQANRRVKLNQKLTFPLVLDMAPYM-----ADSGEAP----------MLYDAYAVLLHSGSAHSGHYFAFVK 361
BLAST of mRNA_F-serratus_M_contig6809.17868.1 vs. uniprot
Match: A0A2P6V3S3_9CHLO (Ubiquitin carboxyl-terminal hydrolase 26 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V3S3_9CHLO) HSP 1 Score: 79.0 bits (193), Expect = 9.560e-15 Identity = 47/116 (40.52%), Postives = 61/116 (52.59%), Query Frame = 1
Query: 1 EPLTGDSQYFCYNCEQKKDAFRSQYPATVPPVLMFSLNRLDSFSADGDRTKAHEAFKYPLVLDMEPFLNGQAWAESARSHDSSKTGQGGGTLYDLQAVVVHRG-SADSGHYHALIR 345
E + GD+QY C C +K DA R Q ++PPVL SL R DR K + F +PL LDM PF+ Q G LYDL+A++VH+G SA +GHY A I+
Sbjct: 277 EFMDGDNQYHCDYCAKKVDATRQQELRSLPPVLCMSLRRFVFDFQRMDRIKVSDKFAFPLALDMAPFVGQQP----------------GSMLYDLEAIMVHKGGSALAGHYVAHIK 376
BLAST of mRNA_F-serratus_M_contig6809.17868.1 vs. uniprot
Match: A9V5C2_MONBE (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V5C2_MONBE) HSP 1 Score: 78.6 bits (192), Expect = 1.270e-14 Identity = 49/116 (42.24%), Postives = 58/116 (50.00%), Query Frame = 1
Query: 1 EPLTGDSQYFCYNCEQKKDAFRSQYPATVPPVLMFSLNRLDSFSADGDRTKAHEAFKYPLVLDMEPFLNGQAWAESARSHDSSKTGQGGGTLYDLQAVVVHRGS-ADSGHYHALIR 345
E LTGD+QY C CE K DA R +P VL L R + K +AF++P VLDM F A+ RS D LYDL AV++HRGS A GHY A IR
Sbjct: 306 EHLTGDNQYHCSQCEAKHDAARQVLLDQLPDVLHLQLMRFVYDLTTFRKKKVTKAFRFPAVLDMSAFAKTTQGAKKRRSSDR---------LYDLSAVLLHRGSSATCGHYMAQIR 412
BLAST of mRNA_F-serratus_M_contig6809.17868.1 vs. uniprot
Match: UPI001455A988 (ubiquitin carboxyl-terminal hydrolase 24-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001455A988) HSP 1 Score: 78.6 bits (192), Expect = 1.330e-14 Identity = 44/128 (34.38%), Postives = 64/128 (50.00%), Query Frame = 1
Query: 1 EPLTGDSQYFCYNCEQKKDAFRSQYPATVPPVLMFSLNRLDSFSADGDRTKAHEAFKYPLVLDMEPF-LNGQAWAESARSHDSSK------------TGQGGGTLYDLQAVVVHRGSADSGHYHALIR 345
E L GD+ YFC C +K++ + T+PPVL+ L R D G K + FK+P +LDMEP+ + G A ES + +S T Y L V+VH G A++GHY++ I+
Sbjct: 1795 EMLDGDNAYFCEKCNEKRNTIKRTCIKTLPPVLVIQLKRFDYDWEAGRALKFDDYFKFPWLLDMEPYTVRGTARRESQQPVESQPDASPETHKEKLLTQNSSEDWYQLVGVIVHSGQANAGHYYSFIK 1922
BLAST of mRNA_F-serratus_M_contig6809.17868.1 vs. uniprot
Match: A0A397UDV5_9GLOM (Ubiquitinyl hydrolase 1 n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397UDV5_9GLOM) HSP 1 Score: 77.8 bits (190), Expect = 2.480e-14 Identity = 42/117 (35.90%), Postives = 62/117 (52.99%), Query Frame = 1
Query: 1 EPLTGDSQYFCYNCEQKKDAFRSQYPATVPPVLMFSLNRLDSFSADGDRTKAHEAFKYPLVLDMEPFLNGQAWAESARSHDSSKTGQGGGTL--YDLQAVVVHRGSADSGHYHALIR 345
E L GD+QYFC C + DA + T+P L+ L R D R K +E F++P ++MEP+ + + D SK G + Y+L V+VH G+ADSGHY++ I+
Sbjct: 1904 ELLDGDNQYFCAKCNKSVDAIKRSCIKTLPKNLIMHLKRFDFDMELLKRVKINELFEFPTHINMEPYTLDYLIRKESGQLDDSKVDVGNKSQFEYELVGVLVHTGTADSGHYYSFIK 2020 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6809.17868.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6809.17868.1 >prot_F-serratus_M_contig6809.17868.1 ID=prot_F-serratus_M_contig6809.17868.1|Name=mRNA_F-serratus_M_contig6809.17868.1|organism=Fucus serratus male|type=polypeptide|length=115bp EPLTGDSQYFCYNCEQKKDAFRSQYPATVPPVLMFSLNRLDSFSADGDRTback to top mRNA from alignment at F-serratus_M_contig6809:6801..8579+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig6809.17868.1 ID=mRNA_F-serratus_M_contig6809.17868.1|Name=mRNA_F-serratus_M_contig6809.17868.1|organism=Fucus serratus male|type=mRNA|length=1779bp|location=Sequence derived from alignment at F-serratus_M_contig6809:6801..8579+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig6809:6801..8579+ >mRNA_F-serratus_M_contig6809.17868.1 ID=mRNA_F-serratus_M_contig6809.17868.1|Name=mRNA_F-serratus_M_contig6809.17868.1|organism=Fucus serratus male|type=CDS|length=690bp|location=Sequence derived from alignment at F-serratus_M_contig6809:6801..8579+ (Fucus serratus male)back to top |